Tyto alba (Barn owl): 104355553
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Entry
104355553 CDS
T07816
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
tala
Tyto alba (Barn owl)
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tala04515
]
104355553 (PCDH18)
Cell adhesion molecules [BR:
tala04515
]
Cadherins
Protocadherins
104355553 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
PepSY
Syndecan
G1_gp67_N
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
104355553
NCBI-ProteinID:
XP_032853696
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MNCKNLQMHRIGSKMHFIFVFALTIISFNKAVLGKNLKYRIYEEQRVGSVIARLSEDVAD
VLLKMPNPSSVRFRAMQRGNSPLLVVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITL
PTEHLQLFHVEVEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSAFDPDVGDNSLHT
YSLSANDFFSIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDNGVPQRSGSSLLK
ISISDSNDNSPVFEQQSYIIQLLENSPIGTLLIDLNATDPDEGANGKVVYSFSSHVSAKI
IETFKIDSEKGHLTLLKQVDYEVTKSYEIDAQAQDLGPNSIPAHCKIIIKIVDVNDNRPE
INLNLMSPEKEEVAYISEGSPLDTFVALVRVQDKDSGVNGEIVCKLHGHGHFKLQKTYEN
NYLILTNATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQISDENDNPPRFQTNRYEVV
ILENNSPGAYITSVTATDPDLGDNGQVTYTILESYILGSSITTYVTIDPSNGAIYALRTF
DHEEVNQIAFMVQARDGGSQQLVSNTTVVLTIIDENDNAPVIVGPVLRNSTAEISIPKDA
GIGFLVTRIRATDRDSGMNSELSCSIAADKENSIFVMDPKTCDISINVSVESVPAKQWEF
FVIVQDKGSPRLSTKALLKCTVFEYVYSFSSTEATLVSQPSLDVSMITIISLGSICAVLL
VIMVIFATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSH
HRASPSSSPTLERGQMSSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQL
LSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRESPID
RLLGEGFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEF
QSPQQQLQLQQQQQQQQQQQQQQGLEEDPQPADANEKKKSFSTFGKDCQSEEESGDTCTS
SLLSEMSSVFQRLLPPSLDAYTECNEMDRSNSLERRKGPLPAKTVSYPQGVAAWAASTHF
QNPANNGPTLGTHSSAQPSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVA
EINKLLQDVRQN
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgaattgcaaaaacttacaaatgcaccgaatcggcagtaaaatgcactttatattcgtt
tttgcactgacgataatatctttcaataaggctgtgctgggcaagaatttgaaatacagg
atttatgaggagcagagagttggatcggtaattgcgagactatcggaggatgtagctgat
gttttattaaaaatgcctaacccttcctcggttcgtttccgagccatgcagagggggaat
tctcccttgctcgtagtccgtgaggataacggagaaatcagcataggagctaaaattgac
cgggaacaactctgccagaaaaacttaaactgctccatagagtttgatgtgatcactctg
cctactgaacatctgcagcttttccatgttgaagttgaagtgctggacattaatgacaac
tctccccagttttcccgagctcttatccctatcgaaatatccgagagtgcagctgtagga
acccggatccctttggacagcgcttttgacccagatgtaggggacaactccctgcacact
tactccctttctgcaaatgatttttttagtattgaggtgagaaccaggactgatggcgct
aagtatgcagagctgatcgtggtcagagagctggaccgggagttgaagtcaagttacgaa
ctccaactcactgcttcagataacggggtgcctcagagatctgggtcatccctcctgaaa
ataagcatttccgattccaatgacaacagccctgtttttgagcaacagtcctatataatc
caactcttagaaaattcaccgattgggacgttgctcatagacctcaatgctactgatcca
gatgagggcgctaatggaaaagtcgtctactctttcagtagtcatgtgtctgccaaaatt
atagagacttttaagatagactctgagaaaggacatctgaccctcctgaagcaggtggac
tacgaagtaaccaaatcctatgaaattgatgctcaggctcaagatttggggccgaattct
attccagctcactgcaaaattataattaaaattgtggatgtgaatgacaacagacctgaa
attaacttaaacctgatgtccccagagaaagaagaggtagcttacatttctgaagggtca
cccctggacacttttgttgccctggtcagggtgcaagacaaggactctggtgtgaatgga
gagatagtctgcaagctccatggacatggccactttaagcttcaaaagacttatgaaaat
aactatttaatcttgactaatgccactctagatagggagaaaaggtctgagtacagcttg
actgtaatagcggaggacaagggaacgccaagtctctccacagtgaaacactttactgtc
caaatcagcgatgaaaatgacaacccaccccgcttccagacaaacagatatgaagttgtt
atcttggaaaataactctccgggagcgtacatcacatcagtcacagccacagacccagat
ttaggtgacaacgggcaggtgacctacactattttggagagctatattttgggaagttct
ataaccacatatgtgaccatcgatccctccaatggggcgatctatgccctgcgaaccttt
gatcatgaagaagtaaatcagattgcctttatggttcaagctagggacggggggagtcag
cagcttgttagcaataccacagttgtactgaccatcattgatgaaaatgacaatgctcct
gtcattgtgggaccagtgctacgcaacagcacagcagaaatctcgatccctaaagatgct
ggaattggctttcttgtcaccaggataagggctactgatagagactctggtatgaactct
gaactcagctgctccatagcagctgacaaggaaaacagcatctttgtgatggatcccaaa
acttgtgacatctctatcaatgtgagtgttgaatcagttccagctaaacaatgggagttt
tttgtgatagtccaggataaaggcagtcctcggcttagtaccaaagcacttctgaaatgt
accgtttttgagtacgtttattcattttcaagcacagaagcaactttggtaagccaaccc
tccctggatgtctccatgataacgattatatccttaggatcaatatgtgccgtgttgttg
gtcattatggtaatctttgctacgaggtgtaatcgagagaaaaaggacaccaggtcctac
aactgtcgtgtggcagaatcgacctaccagcaccacccaaaacgaccctcaagacagatc
cacaaaggggacattacattagtgccaacggttaatggcactttacccatcagatctcat
cacagagcttctccgtcgtcatctccaaccctggaaaggggacagatgagcagccggcag
agtcaccacagccaccaatcgctgaacagcctggtgacaatctcctctaaccacgtgccc
gaaaatttctccctggaactcacccatgctactccagctgttgagcaggtttctcagctt
ctctcgatgcttcaccagggccagtatcaaccacggccaagttttcgaggaaacaagtat
tccagaagctacagatatgccctacaagacatggataaattcagcttgaaagacagtggc
cggggtgatagcgaagctggagacagtgattatgatttggggagagagtctccaattgac
agacttcttggggaaggattcagtgaccttttccttacagatgggagaattcctgcagca
atgcggctgtgcacggaggagtgcagggtcctggggcactctgaccagtgctggatgccg
ccgttgccctctccctcctccgattacagaagtaacatgttcatccctggggaggagttc
cagtcgccccagcagcagctgcagttgcagcagcagcagcagcagcagcagcagcagcag
cagcagcagggcctcgaggaagatccacagcctgctgacgccaacgagaagaagaagagc
ttttcaactttcgggaaagattgccagagcgaggaggagtcaggggacacctgtacctcc
tctctcctctccgaaatgagcagcgtcttccagcgcctgctgcctccctcgctagatgcc
tacacggagtgcaatgagatggatcgctccaactcactggagcgcaggaagggacctttg
ccagccaagaccgtcagttatccgcagggggtggcagcctgggcagccagcacacatttc
caaaatcctgccaacaacgggcccactctggggactcactcgagcgcgcagccttcctct
aaatggctgccagccatggaggagatcccagagaattacgaagaagatgattttgacaat
gtgctcaaccacctcagtgatggtaaacacgaactcatggatgccagtgagctggtggcg
gaaattaacaagctgctgcaagatgtccggcagaactaa
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integrated database retrieval system