KEGG   Tyto alba (Barn owl): 104355696
Entry
104355696         CDS       T07816                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
tala  Tyto alba (Barn owl)
Pathway
tala03030  DNA replication
tala03410  Base excision repair
tala03420  Nucleotide excision repair
tala03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tala00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104355696 (RFC4)
   03410 Base excision repair
    104355696 (RFC4)
   03420 Nucleotide excision repair
    104355696 (RFC4)
   03430 Mismatch repair
    104355696 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tala03032]
    104355696 (RFC4)
   03036 Chromosome and associated proteins [BR:tala03036]
    104355696 (RFC4)
   03400 DNA repair and recombination proteins [BR:tala03400]
    104355696 (RFC4)
DNA replication proteins [BR:tala03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104355696 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    104355696 (RFC4)
Chromosome and associated proteins [BR:tala03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104355696 (RFC4)
DNA repair and recombination proteins [BR:tala03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104355696 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    104355696 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 Rad17 AAA_30 AAA_16 AAA_22 AAA_11 DUF815 AAA_24 Mg_chelatase AAA_14 SLFN-g3_helicase RuvB_N AAA_28 AAA_19 AAA_5 TIP49_C AAA_7 ResIII AAA_3
Other DBs
NCBI-GeneID: 104355696
NCBI-ProteinID: XP_032862349
LinkDB
Position
Unknown
AA seq 362 aa
MQAFLKGPSSISTKPLAAKERGAAGSSGEGKRLKPIPWVEKYRPKNVDEVAFQDEVVAVL
KKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVIREK
VKAFAQLTASGSRSDGKICPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNY
ISRIIEPLTSRCSKFRFKPLSDKIQQQRLLDVSEKEHVKISSEAILYLVKVSEGDLRKAI
TFLQSATRLMGGKEITEKIVTEIAGVIPKEAIDELLSVCQSGSFEKLETLAKNLINEGYA
VAQLVNQLHDTIVESEDYSDKQKSVIVEKLAEVDKCLADGADEYLQLVSLCALVMQQLTR
NT
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgcaggccttcctgaaaggcccgtcttccatcagcaccaagcccctcgctgccaaggag
aggggcgcggcagggagcagcggggagggcaagagactcaaacccattccctgggtagag
aaatatcgcccaaaaaacgtggatgaagttgccttccaggatgaagttgttgctgtgctg
aaaaagtccttggaaggtgctgatcttcccaatctgttgttctatggcccacctggaact
ggaaagacttccactattttagcagctgctagagaactctatgggcctgaattattccgg
caaagagtccttgagttaaatgcttctgatgaacgtggaatacaagtgattcgggaaaaa
gtgaaggcttttgctcagctaactgcatctggaagccgttcagatggtaaaatttgtcct
ccttttaaaattgtaatcctggatgaagcagactcaatgacttcagcagcccaggcagcc
ttgagacgcacaatggaaaaagaatctaaaacaacacgtttctgccttatttgtaactac
atcagcagaataattgaacctttaacatctcgatgctccaaattccgcttcaagcctctg
tcagataaaatccaacagcagaggctactggacgtttctgagaaggaacatgtgaaaatc
agtagtgaggcgatattgtaccttgttaaagtgtcagaaggggacttaagaaaagcaatt
acttttcttcaaagtgccactcgcctaatgggtgggaaagaaatcacagagaagatagtc
actgaaatcgctggggtcatccctaaagaagcaattgatgaactgctatctgtctgccag
agtggttcatttgagaaactggaaacgctggcaaagaatctcataaatgaagggtatgct
gttgctcagcttgtaaaccagctgcatgatacgattgttgagagcgaagattacagtgac
aagcagaaatctgtcatagtcgagaaacttgcggaagtagacaaatgcttggcagatggt
gctgatgaatacttgcagttggtgagtctctgtgccctggtgatgcagcagctcacccgc
aacacttga

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