Tyto alba (Barn owl): 104355761
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Entry
104355761 CDS
T07816
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104355761 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tala03021
]
104355761 (CPSF3)
03019 Messenger RNA biogenesis [BR:
tala03019
]
104355761 (CPSF3)
Transcription machinery [BR:
tala03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104355761 (CPSF3)
Messenger RNA biogenesis [BR:
tala03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104355761 (CPSF3)
U7-dependent histone pre-mRNA processing factors
104355761 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
104355761
NCBI-ProteinID:
XP_032865836
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MSAKRKGEALIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRG
GRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KPEQGQRISGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTQAIPYTGPFNLLYYQLQKL
TGDVEEIEIQQKPALKVFKNITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKI
QKAAVHKISKKVDMDVYRKRMEIMLQDMFGEDSVSSKDGSVLCVTVDGKTANVSLDTRTV
DCEPGSDDDESLREMVELAAQRLYDALSPVY
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaagcggaaaggcgaggccttgatcccggcggaggagagcgatcagctgctc
atccggccgctaggtgctggccaggaagtaggaaggtcatgcattattctggagtttaaa
ggaagaaaaataatgcttgactgtggaatccatcctggactggaaggaatggatgctctt
ccttacattgatttgatagatcctgctgagattgatctcctcctaattagtcatttccat
ttagatcactgtggggctttaccatggtttttgcagaaaacaagttttaaaggaaggacg
tttatgactcacgccacaaaagctatttacagatggcttctttcagactatgtcaaagtc
agtaacatatcagcggatgacatgctatatacagaaacagaccttgaagaaagcatggac
aagattgagaccatcaacttccatgaagtgaaagaggtggcaggaatcaaattctggtgt
taccatgcaggtcacgttctgggagcagccatgtttatgattgaaatagctggtgtgaag
cttttatatacaggtgatttctcaagacaggaagacagacatctgatggcagctgagatt
cccaatattaaacccgatattcttataattgaatccacatatggtactcatattcacgaa
aaaagggaagagcgagaggcaaggttctgtaatactgttcacgacatcgtaaacagagga
ggtagaggtcttattcctgtgtttgccctgggacgagctcaagagctacttttaatttta
gacgaatactggcagaatcatcctgaactccatgatatccccatatactatgcctcctct
ttggcaaagaaatgtatggcagtttatcagacatatgtcaatgccatgaatgacaaaatc
cgcaagcaaattaacatcaacaatccatttgttttcaagcatattagtaatctgaagagt
atggatcattttgatgatattggcccaagtgttgtgatggcttccccaggtatgatgcag
agtggcttatccagagagttgtttgagagctggtgcacagataagagaaatggagtgatt
atagcagggtactgtgttgaaggaacgcttgctaagcacatcatgtctgaacctgaagag
atcacaactatgtcagggcaaaaactcccactgaagatgtctgtggattacatttctttc
tctgctcacacagattatcaacaaactagtgaatttatccgggccctgaagcctccacat
gtgattttagttcacggtgagcagaatgaaatggccagattgaaagcagcattgatacgg
gaatatgaggataatgatgaagttcatatagaagttcataatcctaggaatactgaagct
gtgacactaaacttcagaggagaaaaacttgctaaggtgatgggatctttagcagataag
aaaccggagcaaggacagagaatttctggaatcctagttaaaagaaattttaactatcac
atcctttctccatgtgacctctccaattatacagacctggcgatgagcactgtaacacag
acacaagccattccatatacgggccctttcaatctgctttattatcagctacaaaagctt
actggtgatgtagaagaaatagaaatccaacaaaaaccggccctgaaggttttcaaaaat
attactgtgatccaggaaccaggaatggtagtccttgagtgggttgcaaatcctgctaat
gatatgtatgcagacaccgtgacaacagtgatactggaagttcagtcaaatcctaaaata
cagaaagctgcagtacataaaatttccaaaaaagtagatatggatgtgtataggaagaga
atggagatcatgcttcaggatatgtttggagaagactctgtgagttcaaaagatggctct
gtcctgtgcgtcacagttgatgggaagactgcaaacgtttcgctggacactcggacagtt
gactgtgagccaggaagtgatgatgatgaatcccttcgtgaaatggtggaactggctgca
cagaggctttatgatgccctcagcccagtatactga
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integrated database retrieval system
