Tyto alba (Barn owl): 104356095
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Entry
104356095 CDS
T07816
Symbol
TRUB1
Name
(RefSeq) LOW QUALITY PROTEIN: probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tala
Tyto alba (Barn owl)
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tala03016
]
104356095 (TRUB1)
Enzymes [BR:
tala01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
104356095 (TRUB1)
Transfer RNA biogenesis [BR:
tala03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104356095 (TRUB1)
Prokaryotic type
104356095 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
Pus10_C
Motif
Other DBs
NCBI-GeneID:
104356095
NCBI-ProteinID:
XP_042647219
LinkDB
All DBs
Position
Unknown
AA seq
297 aa
AA seq
DB search
MAAGEAGGVVLGRSAEKLFSLSGLFAVYKPKGPTSAGVLNLLKERLLAEAGVQTNGNKRN
QVLKIGHGGTLDSAAAGVLVVGIGKGTKMLRTMLAGSKKYTAIGVLGKATDTLDATGKVT
EEKPYDQITKGDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVR
VYSLSLQQFQPPLFTLDVECGGGFYVRSLVNDIGKELSTCATMQELTRTKQGPFTLEEHA
LYEDKWTIDEIARSLEHCTSLFLGEPSHKKLKTEHPGETAVSCEDSDKLGQRRRLND
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggagaggcgggaggtgtcgtgctcggccggtccgctgagaagctcttttct
ctgagcgggctgttcgcggtgtacaagcccaaggggcccacctcggccggcgtgctcaac
ctcctgaaggagaggctgctggcagaagctggtgtgcaaacaaatgggaacaaaagaaat
caggttttgaaaattggacatggtggaactttggacagtgcagcggcaggagttctggtg
gttggtattggaaaaggaacaaaaatgctgagaactatgttggcaggttccaagaaatac
actgccattggagtactgggcaaagctactgatacattagatgctacaggaaaagtaact
gaagaaaaaccttatgaccagataacaaaaggagatcttgaaaatgtgctgcagaagttc
acaggagacataatgcaggttcctccactctattctgctttgaagaaggatggagaaaga
ctatcaactctgatgaagagaggagaagcagtcgaagcaaagcctgctcggccagtaaga
gtgtacagcctctctctccagcagttccagccacctctgttcacactggatgttgaatgt
ggtggtggcttttatgtcaggagcctggtcaatgacattggcaaagaactctctacctgt
gccactatgcaagagctgacccgaaccaaacaagggccatttacgctagaggagcatgcc
ctttatgaagacaaatggacaattgatgaaattgcacgatccttagagcattgcacgtct
cttttcctgggagagccatctcataaaaaattgaagacggagcatcctggtgaaactgct
gtgagctgtgaagatagtgataagttgggtcaaagaagaagactgaatgattga
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