Tyto alba (Barn owl): 104356592
Help
Entry
104356592 CDS
T07816
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104356592 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tala03019
]
104356592 (CNOT10)
Messenger RNA biogenesis [BR:
tala03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104356592 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_12
TPR_8
ARM_TT21
TPR_MalT
TPR_17
TPR_7
DUF6058
BLOC1_2
EMP24_GP25L
DUF948
Motif
Other DBs
NCBI-GeneID:
104356592
NCBI-ProteinID:
XP_042662262
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MAADKAADQGTEKHEGAGTSGITDQEKELSSSALQAFLAGNYDACLQHLNTLQDINKDDY
KITLNTAVAEFCKSNQTTTDNLRQTLNQLKNQVHSVVEEMDGLDDVENSMLYYNQAVILY
HLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAEKALHLLAVLEKMISQ
GNNNSKNGKNESGNNTNKDASNQKAESGALIEVAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTGECLRCMFWNNLG
CIHFAMGKHNLGIFYFKKALQENDNACAQLGTGSSDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQEPK
QENGSKTSNQLGGNTENSESSEACSNKSHEGDKFIAAPPSSPLKKQELENLRCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEYD
KARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKTLSDMRK
KPVFQPVHSIQPIQMPAFTTVQRK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacaaggctgcggatcaaggtactgagaaacatgaaggagcgggtacttct
gggattactgatcaggaaaaggaattgtcgagcagtgcattacaagcttttctggctgga
aactatgatgcttgtttacaacacctgaatacccttcaagacataaacaaagatgactac
aaaataactttgaatactgctgttgcggagttctgtaaaagtaaccagactacaacagac
aatttgcgacaaacccttaaccagctgaagaaccaggttcactctgttgttgaagaaatg
gatggtttagatgatgttgaaaatagtatgctgtactacaatcaagctgttattttgtat
catctgcgtcagtatactgaagctatatcagttggggagaagctgtaccagtttatagag
ccttttgaagagaagtttgcccaggctgtgtgcttcttgcttgtagacttatacctgcta
acttaccaagctgagaaagctttgcatctgcttgctgttctggaaaaaatgatttcacag
ggcaacaataacagcaagaatggaaaaaatgagtcgggtaataatacaaataaagatgcc
tcaaatcaaaaagctgaaagtggagctttaatagaagttgcaaaatctaagatccatcag
tataaggtgagagcctacatccagatgaagtcactaaaagcatgcaaaagggagatcaag
tctgttatgaatacagctgggaattcagctccttctctctttcttaagagcaattttgaa
tatctgaggggcaattatcgtaaagcagtcaaacttttaaacagtgcaaacattgctgaa
catccaggcttcatgaaaacaggtgaatgcttaaggtgtatgttctggaacaatcttggc
tgcatccactttgcaatgggaaagcacaatttaggaattttttactttaaaaaagccttg
caagaaaatgataatgcgtgtgcccagctaggaacgggcagctcagatccaggtaaaaaa
ttttcagggagacccatgtgtacgctactgactaacaaacggtatgagctgctctacaat
tgtgggattcagctcctgcatattgggaggcccttagctgcctttgaatgcctgattgag
gcagtccaggtttatcactcaaaccctcgtctttggctgagaatagcagaatgctgcatt
gctgccaataaagggacatcagaacaagagactaaaggtcttcccagcaaaaagggaatt
gtgcaatctatagtaggtcaaggctaccaccgtaagatagtcctagcatcccagtcaata
cagaatgttgtttataatgatgggcagtcctcagcaatacctgtagccagtatggaattt
gcagcgatttgtctaagaaatgccttgctgctactgccagaagatcagcaggagccaaag
caggaaaacggatctaaaactagtaatcagctggggggaaatacagaaaacagtgaaagc
agtgaagcatgcagcaataaaagtcacgaaggggataaattcattgcagctccaccttct
tcgcctttgaagaaacaggaattagaaaatttaaggtgctcaatacttgcgtgtagtgcc
tacgtggctctggctttgggcgataaccttatggcactgaatcatgcagataaacttctt
cagcaaccaaagctgtcagggtcccttaagtttctcgggcacttgtatgcagcagaagct
ctcatctctctagacagaatatctgatgccatcactcacttgaaccccgagaacgtcact
gatgtttccctcgggatctcttcaaatgagcaggatcaagggtctgacaaaggagagaat
gaggcaatggaatcttctggcaagcagacaccacagtgttaccccagttcggtcacatct
gcacgaacaatgatgttatttaacctgggaagtgcttactgcttgaggagtgaatacgac
aaagctcgaaagtgtcttcatcaggctgcttccctgatccaccccaaagagatccctcca
gaggctattctgttggctgtatatcttgaattacagaatggtaacacacagctggcactg
cagatcatcaagagaaaccagcttctcccttctgtgaaaacactctcggacatgcggaag
aagcccgtgtttcagccagtccactcaatccagcccatccagatgccagctttcaccact
gttcaaaggaagtga
DBGET
integrated database retrieval system
