Tyto alba (Barn owl): 104356629
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Entry
104356629 CDS
T07816
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
tala
Tyto alba (Barn owl)
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tala03009
]
104356629
03036 Chromosome and associated proteins [BR:
tala03036
]
104356629
Enzymes [BR:
tala01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104356629
Ribosome biogenesis [BR:
tala03009
]
Eukaryotic type
Pre-60S particles
Helicases
104356629
Chromosome and associated proteins [BR:
tala03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104356629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
ERCC3_RAD25_C
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104356629
NCBI-ProteinID:
XP_032850470
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MGAVWGRAARLGVPAVPPLSDRRRLGWLCGPGTSSPPPLLLLLLAKAALPPRGPLRPLAA
PGFLRAGADRGAWGRRCQTSESSVAAHLLGEQPPAMPAAAAPADDDPAEPQAPAGDESVR
RGRQRKGKKETREKQLKRRGKAEGEQAQPEESELVDDELEPPLPKKTKNVKERSNGSEQT
VKLFSAVSHDETSPAAQSVSGDAAAGEQDSDEEELTEEAKEGAFSNFPLSQNTISLLKAQ
GIKYLFPVQVRTFQPIYDGKDVIAQARTGTGKTFSFALPLTEKLQSVSQDGRRGRAPKVL
VLVPTRELATQVARDFKNLTRKLSVACFYGGTPYKAQLDLLKSGIDILVGTPGRIKDHIQ
NSKLELSSVKHVVLDEVDHMLDMGFAEQVEEILGCAYKKGSENNPQTLLFSATCPRWVYD
VAKKYMKDEYEQIDLIGKKTQRTAMTVEHLAIQCRSSQRAGVLGDIIQVYSGSHGRTIVF
CETKREANELAMNASLKQDAQSLHGDIPQKQREITLKGFRTGVFEVLIATNVAARGLDIP
EVDLVIQCSPPKDVDSYIHRSGRTGRAGRTGICICLFQRREEDLLKQVEHKAGITFKRIG
VPSATDVIKASSNDAKKLLESVPPSAVDYFRKSAQELIDEKGAVAALAAALAHISGASYI
QQRSLLNSTAGFVTMVLKCSVEVHTMSYAWRGLKEQLGEAVDDKISAMRFLKGKTGVCFD
IPAGELSNIQEQWRDTRRWQLSVAEELPELEEYSQEAGRGFFRFGSGRQGDGSFKRNNWF
KNRNQGHDV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggtgtggggccgcgcagctcgcctcggcgtccctgcggtccctccgctcagc
gaccggcggcggctgggctggctgtgcggccccgggacgagctcgccgccgccgctgctg
ctgctgctgctggcgaaggcggcgctgccgccccgcggcccgctccgcccgctcgccgcc
cctggcttcctgcgcgccggggctgaccgcggggcttggggccgccgctgccagacgagc
gagagcagcgtggccgcgcatctcctcggagagcagccgcccgcgatgcccgccgccgct
gcccccgccgacgacgaccccgccgagccccaggcgccggcgggcgacgagtcggtgcgc
cgcggccgccagaggaagggcaagaaggagacccgggagaagcagctgaagcggcgcggg
aaggccgagggcgagcaggcccagcctgaggagagcgagctggttgacgatgagcttgaa
ccccccctgcccaagaagacaaaaaacgtcaaggagaggagcaacgggtcagagcagacg
gtgaaacttttctctgctgtaagccacgatgagacgtccccagcagcccagagcgtgtcc
ggcgatgcggccgctggagagcaggacagcgatgaggaggagctgacagaagaagcgaaa
gaaggcgccttctccaattttcctctctcccaaaacaccatcagccttctcaaagctcaa
ggcataaaatacctgttccctgtgcaagtgaggacttttcagcccatatatgatggcaaa
gatgtaattgctcaagctcgaacaggaaccgggaaaaccttttcttttgctcttcctctg
actgaaaaacttcagagtgtctcacaagatggaagaagaggccgtgcaccaaaagttctg
gttcttgttccaaccagggaactggccactcaggtagccagagacttcaagaatctcacc
aggaaactgtcagtggcttgtttttatggagggactccatataaagcacagcttgatctc
cttaaaagtggcattgatattctagtgggaactcctggacggatcaaagaccacattcag
aatagcaagctggaactttccagtgtgaagcacgttgttttggatgaagttgatcacatg
ttagacatgggctttgctgaacaggtggaagaaatcttaggatgtgcttataaaaaaggt
tctgaaaacaacccccagacactgctgttttctgcaacttgtccacgatgggtatatgat
gtcgcaaaaaaatacatgaaagatgaatatgaacagattgacctgattggaaagaagact
cagagaactgccatgactgtggaacacttggctatacagtgccgctcgtctcagagagca
ggagttcttggcgatatcattcaagtctacagtggcagccatgggcggaccattgttttt
tgtgagaccaaaagggaagcaaatgaactggctatgaacgcttcactcaaacaggatgcc
cagtcattgcatggtgacattccacagaaacagagggaaattacattaaaaggctttaga
actggtgtgtttgaagttctgattgcaacaaacgtagctgcccgtggtttggatattcct
gaggttgaccttgttatacagtgttcaccaccaaaagatgttgattcctacatccatcgt
tctggacgtacgggtcgagctggccggactgggatctgcatttgtttatttcagcgaaga
gaagaagatctcctgaaacaagttgagcacaaagcggggattacatttaagcgcataggt
gttccctctgctacagatgtaattaaagcttcaagtaatgatgccaaaaagttgttggag
tccgttcctccctctgcagtagactacttcagaaaatctgctcaagagctcatagacgag
aaaggggcagttgctgccctggctgcagctctagcccatatttctggggcatcttacata
cagcagcgctccttactcaactcaactgcgggttttgtgaccatggtgttaaagtgttca
gtagaagtgcataccatgagctatgcctggcggggactgaaagaacagcttggtgaggca
gtagatgacaaaatatctgcaatgcgtttcctcaaggggaagacgggggtgtgctttgat
atccctgctggtgaactgagtaacatacaggaacaatggagggacaccaggcgctggcaa
ctgtcagtggcagaggaattgcctgagctggaagaatattctcaggaggcgggacgaggc
ttcttcaggtttggaagcgggaggcaaggtgacggcagcttcaagagaaacaactggttt
aagaatagaaaccagggacatgatgtttaa
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