Tyto alba (Barn owl): 104357089
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Entry
104357089 CDS
T07816
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
tala
Tyto alba (Barn owl)
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tala03036
]
104357089 (CHD9)
Chromosome and associated proteins [BR:
tala03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104357089 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
104357089
NCBI-ProteinID:
XP_032853629
LinkDB
All DBs
Position
Unknown
AA seq
2892 aa
AA seq
DB search
MTDPMMDFFDDANLFSDTLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQ
NQQKISDFDQLNQYDSLKLHSVNQSFNSSADNVLSPHSQFNCSPVHPQNQSNGMFPDVAD
GSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLGSQQ
SRNNTGQDALSQPKDFMEVNVSTSLRVSVNHPPPVSNPSTSQQPLSIQPFSQTASASIHF
CGNQDGNFDGQSPTITPCSVNNSQQFSSPYSYSNNHISPTSLLQSTTALSTSQQTHSISD
FTGSDAFTSQTGTKQETTEHMLNPNTTLNSNSFQMLHSAHPQGNFSSSKLSPVNINFSAS
TGSASQISHFTDPIESNGFTSLDDNLLHQVETHNEPFTGLDPDDLLQEDLLPQFDDSAFV
QDSTSHVLEHDLEPHITPQQVTQSSDLVRAQSQSQIHPWHSSVSNQHLQDGSRVTLQGQP
PSSKKTDGSGSYTKLQNTQVRAMSEKKQKKKTDSESKQEKANRIISEAIAKAKERGERNI
PRVMSPENFPSVSTEGKEEKKVRKVKSKPKDKESKKTKTGSSSKTKEKTKIGKLIITLGK
KQKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVSVK
IKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVETEEFFVKYKNY
SYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVSL
CEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPN
SWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL
LAGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIV
RGSYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVL
LTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLK
EDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKC
CNHPYLIKGAEEKILGEFKETYSPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLI
FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL
GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLK
LGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQIL
QRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSL
VIDTPRIRKQTRPFSATKDELAELSEVESEGDDKPKLRRPCDRSNGYGRTECFRVEKNLL
VYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDG
QTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHH
CNKVLLRVRMLYYLKQEVIGNEFQKVFDGIDASEIDVWVPEPDHSEVPAEWWDADADKSL
LIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYKPTPAM
FKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQ
IQPAFPIQTSMMQPPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGR
FDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEERASR
TLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTD
YHILRDPELSFMSAQRNYNHNKVALSRTSTPLLHQYQMALSSSPLTPQSRLSDAKMNAFE
DLKAKNENLKEDPQSSEEESMSTEETHTIMKSEPLSPKNGTPIQNTDHKPSVKTETDRRM
VAARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSG
SSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRAEGAPHIKAYDEESVA
SLSTTQDETQDSFQMNNGTPNSSYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWP
SARRSYDSNMVASFYTTKLLDSPGAAADYSETSAPTPPLAGVKEEYDQSPQMSKVKKHVR
EKEFTVKINDEGGLKLTFQKQGLSQKRPFESEEGALGQQQYLARLRELQNASETSLVNFP
KSLPKSGTSSHLTASANGVIVDSQPVVKKRRGRRKNVEGVEVLFINRNKQPNHVNPGINS
CQVAAGINPALTYTQSQGILDAESPVPVINLKDGTRLAGDDAPKRKDLERWLKEHPGYVE
DSGACIPRMQLHDGRPKQKRHRCRNPNKLDINSLTGEERVQLINRRNARKVGGAFAPPLK
DLCRFLKENPEYGVAPEWGEVVKQSGFLPEGMFDRILTGPVVREEVSRRGRRPKSEIAKA
TAAAAAATAASVSVNPLLANGLLPGMDLPSLQALQQNLQNLQSLQVTAGLMGMPAGLTTG
GEAKNMAAMFPMLLSGMAGLPNLLGMGGLLTKSTESISEEKKGSDSKEADAKKERTEDQN
TDTGGENSVSSSPSTSSAAAAANPLSLNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFD
VQNSESNDTGSAKPTEEKEENSRVRDQEDKGGTEPSSHNENSTDEGSEKADASSGSDSTS
SSSEDSDSSDED
NT seq
8679 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaatctttttagcgataccttagaa
ggtttgtcagatgatgcctttgttcagcctggacctgtttcacttgttgatgaattgaat
ttgggtgcagaatttgaacctttgcacatagactcattgaaccatgtgcaagatgctcaa
aatcagcaaaagataagtgactttgatcagctgaatcagtatgattcactgaaacttcac
tcagtaaatcagtcttttaatagctcagctgacaatgtcttatcaccacactctcaattc
aattgttcaccagttcacccgcaaaaccagtctaatgggatgtttccagatgtggctgat
ggtagtcctatgtggggtcatcaaactgccacaactgtttcgaatcagaatgggtccccc
tttcaccaaggacattctcagtctatgcagcaaaacaaaagctttgtagcacaccatgac
tttgccttatttcaggctaatgaaccgcagcatcagtgtgcctcgctagggtcgcagcaa
agcaggaacaacacggggcaagatgctctgagtcagccaaaagacttcatggaagttaac
gtatctacttctctcagagttagtgttaaccacccacctccagtttctaatccatcaact
tcacagcagcctctgtccattcaaccgttttctcaaactgcaagtgcttcaatacatttt
tgtgggaatcaagatggaaattttgatggacagtccccaactattactccatgttctgtc
aataatagccaacaattttcatctccttattcttactctaataaccacatttctcctacc
agccttcttcagtctacaacagctctttctactagccagcagacacactctatctctgac
ttcactggaagcgatgcctttacatctcaaacagggaccaagcaagaaacaaccgagcac
atgttgaatcctaatacaactttgaattcaaatagttttcagatgttgcattctgcgcat
cctcagggcaactttagtagttcaaaactctctcctgtgaatattaatttttcagcttct
actggttctgcttctcagataagccatttcactgaccctattgaaagcaacggttttaca
tctttagatgacaacttacttcatcaagttgagactcacaatgaaccatttacaggactt
gaccccgatgacctacttcaggaagaccttctgccacagttcgatgattctgcatttgtt
caggatagcacaagtcatgttttagagcatgacttagaaccccatataaccccacagcaa
gtgacacagtcatctgatcttgttcgggcacagtctcaaagtcagatccatccttggcat
tcttcagtttctaatcagcatctgcaagacggaagtcgtgtgaccttacaaggacagcct
ccttcgtccaagaagactgatggctcaggatcatatactaagttgcagaatacccaggtg
agagcaatgtctgaaaagaagcagaagaaaaaaacagactcagaaagtaaacaagagaag
gcaaatcgcataatatctgaagcgattgcaaaagcaaaagagagaggagagagaaacatt
ccacgagtaatgagtcctgaaaacttccccagtgtttcaactgaaggaaaggaggaaaag
aaggttagaaaagttaaatccaaaccgaaggacaaggagagcaaaaaaacgaaaactggt
tcctcatccaaaactaaagagaaaacaaaaattggaaagctaatcatcacactgggtaag
aagcagaaaagaaaaaacgaatcttcagatgaattgtctgatgcaaagcagactccgcag
cggccattaaaagatgaagactcacagaagagaagatcaaatcgtcaagttaaaaggaaa
aaatatgctgaagaaggagaaggaaaacaatcagaagaagaagctaaagtttctgtgaaa
atcaaaaagaactctgcccctttacctgctgaacagcctttacaattatttgtggaaaat
ccaagtgaagaagatgcagcaattgtagacaaaatcttatcctccagggtaataaagaaa
gaaatttctgctgggatgacagtggaaaccgaagagttttttgtaaaatacaagaactac
tcttacctccactgtgagtgggccacagaacaacagcttttaaaggataaaagaatccag
cagaaaataaaacgattcaaactaaggcaagcacaaagagctcacttttttgcagatatg
gaagaggaaccttttaatcctgactatgttgaagtagatcgggtattagaagtatctctc
tgcgaagataaggacactggtgagcctgttatttactatttagtaaaatggtgttcattg
ccatatgaagacagtacgtgggagctgaaagaagatgtagatcaagcaaaaatagaagaa
tttgaacaattgcaagcttccaggcctgactcaaggagattggaccgaccacctccaaac
tcctggaagaagatagaacagtctagggaatataaaaatggcaatcagctcagggaatat
caactggaaggacttaactggctcctattcaactggtacaataggcgaaattgcatttta
gcagatgaaatgggtctcggcaaaaccattcagtcaattacattcctctatgagatcctc
ctggctggtattagagggccttttctgatcatagctccgctttccactataacaaactgg
gaaagagaatttcgcacatggactgaccttaatgttgtagtgtatcatggaagtatgatc
agcaggcagatgattcagcagtatgaaatgtacttcagggactcccagggacggattgtt
cgaggttcctacagattccaagccattatcacaacttttgaaatgattcttggtggatgt
ccagagttaaatgcaattgagtggcggtgcgttattattgatgaagctcacagactgaag
aataaaaattgtaaactcttggaaggactaaaattaatgaaccttgagcataaagtgctg
ttaacgggtaccccactgcagaacacagtagaagaattatttagcctccttcactttctt
gaaccattgcgttttcctgctgaatctacattcatgcaagaatttggagaccttaaaaca
gaggaacaggttcagaaactacaagctatcctgaaacccatgatgctcaggcgattaaag
gaagatgtagaaaaaaagctggctccgaaggaggaaactataattgaagtagaactaact
aatattcagaaaaaatattatcgagctattttggagaaaaattttgctttcttgtccaaa
ggagcagggcaagcaaatgtacccaatctggttaacactatgatggaactcagaaagtgt
tgtaatcacccttatctcatcaaaggtgctgaagaaaaaatccttggagagtttaaagaa
acgtatagcccaagtgctcctgacttccatctgcaagcaatgatccagtctgctggtaaa
ttggttcttattgataaacttcttccaaaaatgaaagcaggaggccacaaggtccttatc
ttctctcagatggtgcgctgccttgatattttggaggattaccttatacataaaagatac
ctgtatgaacgaatcgatgggcgagtacgagggaatctcagacaagctgcgattgaccgg
ttcagcaaaccagattccgatcgctttgtcttccttctgtgcaccagagctggtggattg
ggcattaacttgactgcagcagatacatgtatcatttttgattctgactggaatcctcaa
aatgatctgcaggcacaagcccgatgtcacaggattggtcagaacaaagcagtgaaggtc
tacagattgataacgcgtaactcctatgagagagagatgtttgacagagcaagcctgaaa
ctggggctggataaggctgtcttacagagcatgagtggacgagagaacagtgttggtggt
atccagcaactctcgaaaaaagaaatagaagacttgcttcgaagaggtgcgtatggtgcc
attatggatgaagaagatgaaggctctaaattctgtgaggaggacattgaccaaattttg
cagcgtcgtactaaaactatcacaattgaatcagaaggaaggggctccacatttgccaag
gctagttttgttgcatctggaaacaggactgatatttcactagatgatcccaacttctgg
cagaaatgggccaaaaaagcagaaatcgatatagatgctatcagtggtagaaacagtctg
gttattgataccccaagaattaggaaacaaacacggcccttcagtgctacaaaggatgag
ctggccgagttgtctgaagtggagagtgagggtgatgataaaccaaaactccgcaggcct
tgtgaccgttccaatggctacggaagaacagagtgctttcgggtcgaaaaaaacttgctg
gtctatgggtggggtcgatggagagaaattctgtcacatggtcgcttcaagaggcagctg
aatgaacaggatgtggagataatttgccgagcactgttagcctattgtcttgttcactac
agaggagatgagaaaattaaaagttttatatgggatctcattactccgacagaggatggg
caaacacgagagttacagaatcaccttggcttatcagcccctgtgcctagaggaaggaaa
ggaaaaaaagtgaagacccaggctagcacttttgatatacacaaagcagaatggcttcga
aaatacaatccagaacatctgttgcaagatgaaggatacaaaaagcacataaaacaccac
tgcaacaaggtcttgcttcgagtaagaatgctgtattacttaaaacaagaagtcattggt
aatgaattccaaaaggtgtttgatggaattgatgccagtgaaattgatgtctgggtccct
gagccagatcactctgaagttcctgctgagtggtgggatgcagatgcagataaatctctt
ctaattggagtttttaaacatggttatgaaaaatacaacactatcagagcagacccagcg
ctgtgcttcttggaaagggttggcaagccagatgaaaaagcagttgctgctgaacagaga
gcaaatgattatattgatggggatgtagaagatccagaatataaaccaacaccagcaatg
tttaaagatgacatagaggatgatgtttcatccccaggtgatctagtaatagcagatgga
gatggacaaatgatggaaggagacaaaatctattggcccactcaatctgccttaacaaca
cgccttcgccgtctaataacagcctatcaacgaacaagtaaaaataggcaggcccagcag
atccagccagcattccccatacaaactagtatgatgcagcctccgtatgaagaagctgct
ctaaatccaaagatggctgctaagattgaaagacagcaacgatggacaagaagggaggaa
gcagacttttacagagttgtgtccacatttggagtggtgtttgatcctgaaaggggacga
tttgattggaccaagttcagagcaatggctagactacataagaaaacggatgagagctta
gagaagtacttgtatgcatttatgtcaatgtgccggagagtctgtcgtctcccctcaaaa
gaagaactggtagacccaaacatttttatccagccaattacggaggagcgtgcttctcgg
actttatatcgcattgaactcctaaggaaagtacgagaacaggctcttagacatccacag
ttgtttgaacgactaaaactatgccagccaaatccagacttacctgtctggtgggagtgt
ggaactcatgacagggacttacttattggagctgctaaacatggagttagcaggacagat
tatcatattcttcgtgatcccgaactgtcatttatgtctgcccagaggaactataatcac
aacaaagtggcactctcaaggacttctactccactcttgcaccagtaccagatggcatta
tcttcttctcctcttacacctcagtcaagattgtcagatgctaaaatgaatgcttttgag
gacttaaaagcaaaaaatgaaaatctgaaagaggaccctcagtcttcagaagaggaatcc
atgtctacagaggagacacatacaataatgaaatcggaacctttgagtccaaaaaatggc
acaccaatacaaaatacagaccacaaacctagcgtgaagactgaaacagacaggcgaatg
gtggcagcaaggacagagcctctaactccaaacccagcttccaaaaaacagcgagtcagc
aaaaggggatctgactcgagctctgactcagactctgactcagatagatcatcatgttct
tccaggtcatcttcttcatcctcttcgtcttcctcatcttgttcacactctcgatcgggc
tctagctcttcatcatcttcatcttgttcttcagcgtcatcatcttcgtcatcatcatcc
tcatcatcgtcgtcgtcatcatcgtcatcgtctgaagagagtgatagtgatgaagaggag
gcacaaaaacgtgcagaaggagccccgcatataaaagcgtatgatgaagagagtgtagcc
tctctgagcacaacacaagatgagacgcaagacagtttccagatgaacaatgggacacca
aattccagttatctcctacaaggtggatacatgttggctgcctcctactggccaaaggat
cgagttatgattaatcgacttgacagtatttgtcaaacagtgttgaaaggtaaatggcct
tcagcaagaaggagctatgacagcaatatggtggcatctttctacacaaccaaacttctg
gatagcccaggtgcagctgcagattacagtgagaccagtgcaccaacaccccctcttgca
ggtgttaaggaagaatatgatcaatcaccacagatgtcaaaggtgaagaagcatgtacga
gaaaaggagtttacagtgaaaatcaatgacgaaggtggtttgaaattgacttttcagaag
cagggactgtctcagaaaaggccttttgaaagtgaggaaggtgcattgggacagcagcaa
tacctggctcggctacgcgaactccagaacgcttcagaaaccagccttgtcaacttccca
aaatcacttcccaaatcaggtacttccagtcacttaacagccagtgccaatggagtcata
gttgacagtcagcctgtagtcaaaaagagaagaggaagaaggaagaatgtggagggagtt
gaggtcctctttataaatagaaataaacagcctaatcatgttaatccaggtattaactcc
tgtcaggttgctgcaggaataaacccagcactcacttacacgcagtcccaaggcatactt
gatgcagagagtccagttcctgttattaacctaaaagatggaaccaggcttgcaggtgat
gatgccccaaaaaggaaagatttagaaaggtggcttaaagaacatcctggatatgttgaa
gattcaggagcttgtattcctaggatgcagctgcacgacgggaggcccaaacaaaaaaga
caccgttgtcgaaaccctaataaactggacattaatagtttgactggtgaagaacgtgtt
cagctcataaatagaagaaatgcaagaaaggtagggggtgcgtttgctccgcctctgaag
gatttgtgcaggttcttgaaagaaaatccagagtatggagtggctcctgaatggggagaa
gttgtaaaacagtctgggtttcttccagaaggtatgtttgaccgtattctcacgggacct
gttgtgcgggaggaagtaagccggaggggaaggcgccccaaaagtgagattgcgaaggca
accgcggccgcagcagctgccacggctgcaagcgtatcagttaaccctctgctggccaac
ggattgcttccaggaatggatctgcctagtcttcaggccttacaacaaaacctgcaaaac
ctgcagtcgctgcaggtaacagcaggattaatgggaatgccagctggcttaactactgga
ggagaagcaaagaacatggctgccatgttccccatgctgctgtcagggatggctggatta
cccaacttgctgggcatgggaggacttctaacaaagtctacagaatctatttcagaggaa
aaaaagggaagcgattcaaaggaggcagatgcaaagaaagaaaggacagaagaccaaaat
acagatactggtggtgaaaactctgtctcaagttctccttcaacgtcctctgctgctgca
gctgccaatcctctctctcttaacccattacttttgtccaacatactttacccagggatg
cttctcactccaggccttaatcttcatatcccagctttgtctcagtctaatatttttgat
gtacagaacagtgaaagcaatgacacgggctcagccaagcccacagaagaaaaggaggaa
aattctcgggttagagatcaggaagacaaagggggaacagagccaagctctcacaatgaa
aacagcacagatgagggttcagagaaagcagatgcttcatctggatctgatagtacatcg
tcttcatctgaggactcagattctagtgatgaagactga
DBGET
integrated database retrieval system
