Tyto alba (Barn owl): 104357683
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Entry
104357683 CDS
T07816
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X2
KO
K14327
regulator of nonsense transcripts 2
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03013
Nucleocytoplasmic transport
tala03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104357683 (UPF2)
03015 mRNA surveillance pathway
104357683 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tala03019
]
104357683 (UPF2)
Messenger RNA biogenesis [BR:
tala03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104357683 (UPF2)
mRNA cycle factors
P-body specific factors
104357683 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
104357683
NCBI-ProteinID:
XP_032841723
LinkDB
All DBs
Position
Unknown
AA seq
1290 aa
AA seq
DB search
MPAERKKPANMEEKESPLNNKEKEFSERRPVSTREKPKEDVKVGMKRETLKVPEDKKKKL
EEDKRKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKLEEEEKKKQEEEEKKKQEEAAAQL
KEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRRVKTVAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQEKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKCSQNKDSSKEESRDSKDAKDNKEAPGSEDLELELENLDINDDPLELDCGDEAE
DLTKKLLDEQGKREGADSTGAENSDGKHAERKQEDEEASTGSHLKLIVDAFLQQLPNCVN
RDLIDKAAMDFCMNMNTKANRRKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDL
CSMLKGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHI
EMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPA
EKTVKKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDAEVKDYVICCMINIWNVK
YNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYN
YRMVESAVIFRTLYSFTSFGVNPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKR
KLDCFLVYFQRYVWWKKSLDVWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEEAIRQV
QDLEREFLIKLGIVNDKDSKDSITEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEG
SDNEEEEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKM
VLENLQQRSGESVKVHQLDVAIPLHLKSQLKKGPPLGGGEGESESGDTMPFVMLTRKGNK
QQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPA
PANTNRERRPRYQHPKGAPNADLIFKTGGR
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgcaaaaagccagcaaatatggaagaaaaagaatctccgttaaataat
aaagaaaaagaatttagtgaaaggcgaccagtgagcaccagggagaagccaaaagaagat
gttaaggttggcatgaagagagagactttaaaggttcctgaagataaaaagaaaaaactg
gaagaggataaaagaaaaaaggaagacaaggagcggaagaaaaaagaggaggataaagta
aaggcagaagaagagcaaaagaagaaagaagaagaagaaaaaaagaaacttgaagaagag
gagaaaaagaaacaagaggaggaagagaaaaagaaacaagaagaagcagctgctcaactg
aaagaaaaagaggaagcacatcagctccatcaggaggcttgggagcgccatcaggcaagg
aaagagcttcgcagcaaaaaccagaatgcaccagacaatcgcccggaggaaaacttcttc
agcagactggattctagtctgaagaagaacacagcttttgttaagaagctaaaaactatt
acagagcaacaaagggactccttgtcccatgactttaatagcctgaatttaagcaaatac
attgcagaagcagtagcttctattgtggaagccaaactgaaaatatcagacgtgaactgt
gctgtgcacttgtgttccctctttcaccagcgctatgctgattttgctccttcattgctt
caggcttggaaaaaacattttgaagcaaggaaagaagagaagactcccaacattaccaag
ttaagaactgatctgcgtttcattgcagaattgacaatagttgggattttcactgacaag
gaaggtctgtctttaatctatgagcagcttaaaaatattattaatgctgatcgagaatcc
cacactcatgtttctgtggttatcagcttttgtcggcactgtggagatgacattgctggt
ttggtaccaaggagagtaaaaactgttgcagagaagtttaacttgagctttcctcctagt
gagataattagcccagagaaacaacagcccttccagaacttgttgaaggaatactttacg
tctttgaccaaacacctgaaaagggaccacagggagctacaaaatattgaaagacaaaac
aggcgcattcttcactccaaaggagagctcagtgaagatcggcacaagcaatatgaggaa
tttgcaatgtcgtatcagaagctgttggcaaattctcagtctctagctgatcttttggat
gaaaatatgcctgaccttccccaagagaaaccgacacctgaggaacatggacctggtatt
gatattttcacaccaggaaagcctggagagtatgacctggaaggaggtatctgggaagac
gaggatgctagaaacttctatgagaatctcattgacttaaaggcttttgtgccagcaatt
ttgtttaaagataatgaaaaatgttctcagaacaaggactccagcaaagaagaatcaaga
gattcaaaagatgccaaagataataaggaagcacctgggagtgaggatttggagttggag
ctggagaacctggatatcaatgatgatccactggagttagactgtggagatgaggcagaa
gatcttacaaaaaagcttcttgatgagcaagggaagagagagggagcagatagcaccgga
gctgaaaatagtgacggaaaacatgctgaaagaaaacaagaggatgaagaagccagtact
ggatctcatttgaaacttatagtagatgcttttcttcagcagcttccaaattgtgtcaac
agagacctcatagacaaggcagcaatggatttttgtatgaatatgaatacaaaagccaac
agaagaaaactggtacgagcacttttcatagttcctaggcaaaggttggatttgttacca
ttctatgcaagactggttgccacattgcatccctgtatgtctgatgtagcagaggatctt
tgttccatgctgaaaggggatttcagatttcatgtaagaaaaaaggaccagatcaacatt
gaaacaaagaataaaactgtgagatttattggtgagcttaccaagtttaagatgttctcc
aaaaatgatactctccactgcttgaagatgcttctgtcggacttttctcatcaccatatt
gaaatggcgtgtactctgctggaaacctgtggaagattcctctttagatcaccagaatct
cacttaagaaccagtgttcttctggaacaaatgatgagaaaaaaacaagcaatgcatctt
gatgcacgctatgttacaatggtagaaaatgcatattactactgtaatccccctccagct
gaaaaaactgtgaagaaaaaacgtcctcctctgcaggaatatattcgtaagcttctatac
aaggatctctccaaggtcaccacagagaaggtcctgagacagatgcgcaagctgccttgg
caggatgcagaagtaaaagactatgttatatgctgtatgatcaacatctggaatgtgaaa
tataatagtattcactgtgtagccaacctcttagcagggttggtcctttaccaggaagat
gtcggaattcatgttgtggatggagtgctagaagatattcgactaggaatggaggttaac
cagccaaagtttaaccaacggcgaatcagcagtgcaaagtttttgggggagctttataat
tatcgaatggtggaatcagctgtaatatttcgaactctgtattctttcacatcatttggt
gtgaaccctgatggtagtcctagtccactggaccctccagagcatcttttcagaatcaga
ctagtttgtactatcctcgatacctgtgggcagtattttgacagaggatccagcaaacga
aaacttgattgcttccttgtatattttcagagatatgtttggtggaaaaaaagtctggat
gtttggacaaaagaccacccgtttcctatagacatagactatatgatcagtgatacactg
gaactgctgagaccaaagataaagctctgcaattctctggaagaagctatcagacaggtg
caagatttggaacgagagttcttaataaaattaggaattgtgaatgacaaagattccaaa
gattccattacagaaggagagaatctagaagaagatgaagaggaggaggaaggtggagca
gagacagaggaacaatctggaaatgaaagtgaagtaaatgagccagaagaagaggagggc
tctgacaatgaggaagaagaaggtgaagaagaagaggaagaaaacacagattatcttaca
gactccaataaagaaaatgaaaccgatgaggagaatacagaagtaatgattaaaggagga
ggacttaagcatgtcccttgtgcagaagatgaggacttcattcaggcattggataaaatg
gtgctggagaatcttcagcaacggagtggtgaatctgttaaagtacatcagctggatgtt
gctattcctctacatctcaaaagtcagctcaagaagggtcccccacttggtggtggggaa
ggggagtcagagtctggagacacaatgccatttgtcatgttaacacgaaaaggcaacaaa
cagcagtttaagatcctaaatgtaccaatgtcttcccaacttgctgcaaaccattggaac
caacagcaggctgaacaagaggagagaatgaggatgaaaaagctcactttggatatcaat
gaacggcaagaacaagaggactaccaggaaatgttgcagtctctggcacagcgtccagct
ccagcaaatactaatcgtgaacggcggcctcgttaccagcatccgaagggagcacctaat
gcagatctaatctttaaaactggtgggaggtag
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integrated database retrieval system
