Tyto alba (Barn owl): 104357818
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Entry
104357818 CDS
T07816
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03030
DNA replication
tala03410
Base excision repair
tala03420
Nucleotide excision repair
tala03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104357818 (RFC5)
03410 Base excision repair
104357818 (RFC5)
03420 Nucleotide excision repair
104357818 (RFC5)
03430 Mismatch repair
104357818 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tala03032
]
104357818 (RFC5)
03036 Chromosome and associated proteins [BR:
tala03036
]
104357818 (RFC5)
03400 DNA repair and recombination proteins [BR:
tala03400
]
104357818 (RFC5)
DNA replication proteins [BR:
tala03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104357818 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
104357818 (RFC5)
Chromosome and associated proteins [BR:
tala03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104357818 (RFC5)
DNA repair and recombination proteins [BR:
tala03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104357818 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
104357818 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_16
AAA_22
AAA_11
AAA_assoc_2
AAA_14
DEAD
RuvB_N
DUF815
AAA_5
ResIII
AAA_30
AAA_19
DNAX_ATPase_lid
AAA_25
bpMoxR
TIP49
TniB
AAA_7
PhoH
ATPase_2
nSTAND3
Thioredoxin_6
Hydantoinase_B
Gp44_lid
AAA_28
Motif
Other DBs
NCBI-GeneID:
104357818
NCBI-ProteinID:
XP_042661182
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MARAGGGNLPWVEKYRPQTLSELVSHRDILSTVQRFISEDRLPHLLLYGPPGTGKTSTIL
ACAKQLYRGREFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMT
QDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHVIQ
EEGVDVTEDGMKALVTLSSGDMRRALNILQSTTMAFGKVTEENVYTCTGHPLKSDIANIL
DWMLNQDFSTAYRKIMELKTLKGLALQDILTEIHLFVHRVDFPPSIRIQLLIKMADIEYR
LAAGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagcgggcggcgggaacctgccgtgggtggagaagtaccggccgcagacgctc
tcggagctggtgtctcacagggatatcctcagcaccgtgcagcggttcatcagcgaggat
cggctcccacatcttctcctctatggccctcccggtaccggtaagacctcgaccatcctc
gcctgtgccaagcagctctaccgggggcgggagtttggctccatggtgctggagctcaac
gcctccgacgaccggggtattgacatcgtccgagggcccatcctgagcttcgccagcacc
aggaccatctttaagaaaggcttcaagctcgtcatcctggatgaagctgatgccatgacc
caggatgctcagaacgccctgaggcgagtgatcgagaagttcacggaaaacacccgcttt
tgcctcatctgcaactacctctccaagatcatccccgccctgcagtcccgctgcacgcgc
ttccgcttcggccccctcaccccggagctgatggtgccgcggctgcagcatgtcatacag
gaggagggggtggacgtgaccgaggacgggatgaaggctctggtgaccctctcgagcggc
gacatgcgcagagccctcaatatcttgcagagtaccaccatggcctttgggaaggtgacg
gaggagaacgtctacacctgcacgggacaccccctcaagtctgacatcgccaacatcctc
gactggatgctgaaccaggacttttccactgcctatcgcaaaatcatggagctgaagacg
ctgaagggcttggccctgcaggacatcctcaccgagatccatctgtttgtgcacagagtt
gatttccccccctcgatccgcatccagttgctgatcaaaatggcagacatcgagtaccgg
ctggctgctgggaccagtgaaaagattcagctgagctccctcatcgcagctttccaagtc
accagggacctgatcgtggccgaagcctga
DBGET
integrated database retrieval system