Tyto alba (Barn owl): 104358018
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Entry
104358018 CDS
T07816
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X2
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
tala
Tyto alba (Barn owl)
Pathway
tala04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104358018 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tala04131
]
104358018 (VPS8)
Membrane trafficking [BR:
tala04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104358018 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
Clathrin
TPR_Vps41
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
Beta-prop_WDR5
zf-RING_UBOX
Beta-prop_WDR3_1st
WDR55
Beta-prop_HPS5
DAHP_snth_FXD
Motif
Other DBs
NCBI-GeneID:
104358018
NCBI-ProteinID:
XP_032848388
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MEAVLEQEAEPCPEPPAHRLSAAELDRELDSRSELIDDKEFDIPQVDTPPTLESILNETD
DEEESFILEDPFLLNIDNTDTHSYDTSSVASSDSGDRTHLKRKKKLPDSLSLHGSVIRLS
LLKGISAQIVSAADKVDAGLPTAIAASNLIAVGTSHGLALIFDQNQALRLCLGSTAVGAQ
YGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIKFTDDPTL
AICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAKVELRDHPITQYSLL
AMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVQNSVNPMLAFCRGDVVH
FLLVKRDDTGAIHVTKQRQLHLHYDLINFTWINSRTAVLLDSVEKLHVIDRQTQEELETI
EISEVQLVYNSSHFKSLATGGNVSEALALVGEKACYQSISSCGGQIFYLGTKSVHVMTLR
SWRERVDHLLKQERLTDALGLAWSFYEGKAKAVVGLSGDTSKRKAVIADRMVEILLHYAD
RTLKKCPDQGKIQVMEQHFQDVVPVIVDYCLLLQRTDLLFNQIYDKMSENSVAKGIFLEC
LEPYILSDKLMGITAQVMKDLLLHFQDKNRLENLEACIVHMDITSLDIQQVVLLCWENHL
YDAMIYVYNSGMNDFISPMEKLFKVIAPPLNAGKSLTDEQVVMGNKLLVYISCCLAGRAY
PLGDIPEDLVPLVKNQVFEFLIRLHSTEGSVDEEVYPYVRTLLHFDTREFLNVLALTFED
FKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPNNTLFVNRTLFDQ
VLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIQMAEKAEFYQICEFMYERELR
YDKIIGCYLRDPVRKEEVFNYIHNILSMPGYSAEEKQSVWQKALEHIEELLLLSPCKAAD
LVAIHFSEQIEGIITNLQDQFLLFQFLRSLLDPREGINQDLIHLPPCITEQFIELLCQYS
PDQVLETLKVLEYCRLEETIQITQKHQLHESSSYLLEKKGDIHGAFLVMLERLQSKLLML
TQDDESSAELPLLEDIEDTLMKTIALCQRNSHNLDQQQREALWFPLLEAMMSPQKLSGSS
QCRYSESLKSLTMQVLNNMAAFIALPSILQRILQDPVYGKGKLGEIQGLVLGMLDTFNYE
QTLLETTTNLLNHDLHWSLCNLRASVTRGLTPKQDYCCICLQQYKRRQETADEIIVFSCG
HLYHSLCLLSKECGTVTKGLMRWMCYKCNSSNKGGRLIENFSELKKGSGASLAQTSSESL
LDPQQIQAFDQLCRLNRGTSRLALLTELSRGHGGEKHGLLSVSHGDPATSSVFQNENFQL
HLAPPPLAED
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgctggagcaagaagccgagccgtgcccggagccgcccgcgcaccggctg
agcgcggcggagctcgaccgtgagctggactctcgcagcgagctgattgatgacaaagaa
tttgacattcctcaagttgatacccctccaacactggagagcatcttaaatgagactgat
gatgaggaagagtctttcattttggaggatccctttctcttgaacattgataacacagat
acacattcctatgacacatcttctgtagcgagctctgacagtggggaccggacacacctg
aaaagaaagaaaaagctccccgattccctctcactccatggatcagttatacggctctcg
cttctgaaaggaatttctgcccaaatagtatctgcagcagacaaagtggatgctggcttg
cccactgcaatagcagcatcaaatctgatagcagtggggacttcccatgggttagcactg
atatttgatcaaaaccaggctcttcggctgtgtctgggcagtactgctgttggggcccag
tatggggctatctctgctctcagtatcaacaatgactgttcgagactcctgtgtggcttt
gccaaaggacagatcacaatgtgggatctggccagtgggaagctgctacgatcaataaca
gatgcccatccaccaggaacagccattttgcacatcaagtttacagatgacccgacgctt
gcaatttgcaacgacagcggaggctctgtatttgaactgtcatttaagagggttatggga
gtgagaacgtgtgaatctcgatgtctcttcagtggctcaaagggggaagtttgctgtatt
gaaccattacatgcaaaagttgagctgagagaccatcctattacccagtattcactgctg
gccatggcctccctaacaaagatactggttattggcctgaagccatctctgaaagtgtgg
atgacctttccttacggtcgtatggacccttccagtgttcctcttctggcatggcacttt
gtggccgtacagaactctgtgaaccccatgcttgcattctgtcgaggagatgtcgttcat
tttcttctggtcaagagagatgatactggtgcaatacatgtcactaagcagaggcagctt
catctacactatgacctcatcaactttacttggataaactcacggacagcagtgcttctg
gacagtgtggagaagctgcatgtcatagatcgtcagacacaggaggagctggagaccata
gagatctcagaagttcagctggtctacaacagcagccacttcaaatcgctggctacggga
ggcaacgtcagcgaagccctggcactggttggagagaaagcttgttatcagtccatcagc
agctgtggtggtcagatcttttaccttggaactaagtccgttcacgtcatgacactgaga
agctggagagagagagttgaccaccttctgaaacaagagcgtctcactgatgccctgggt
ctagcctggtctttttatgaaggtaaagcaaaggctgtagtaggtttgtctggggacaca
agtaagcggaaagcagtcattgcagacagaatggttgaaatccttctccattatgctgat
cggactttgaagaaatgtcctgaccaaggaaaaatccaggttatggagcaacattttcag
gacgtggtgcctgtcatagttgattactgtctcttactccagcgcacggatttattattt
aaccagatatatgataagatgagtgagaattctgtagctaaaggcatctttctggagtgc
ttggagccatatatcttaagtgataagctgatgggaatcacagctcaagtgatgaaagac
ttgctgcttcacttccaagacaaaaacaggttggaaaatttggaagcctgcattgtgcat
atggatatcaccagtttagatatacagcaggtagttcttctgtgctgggaaaaccatctc
tatgatgccatgatctacgtctacaacagtgggatgaatgacttcattagccccatggag
aagctgttcaaagtcattgctcctccactgaatgctgggaagtctctcacagatgagcag
gtggtaatgggcaacaagctgcttgtatatataagctgctgcttggcaggccgtgcttat
ccattgggtgatattcctgaagatctggtacctttggttaaaaatcaggtctttgaattt
ctcatccgactgcattcaactgagggatctgtggatgaagaggtctacccttatgttcgt
accttgctgcactttgacactcgggaattccttaatgttcttgctctgacttttgaagac
tttaagaatgacaagcaagctgtggaatatcagcagagaattgtggacatacttctgaaa
gtcatggtagagaattcggacttcaccccatcacaggttggctgtctctttaccttcctt
gctcgtcagctcgccaagcccaacaacacgttgtttgtgaacaggacgctttttgaccag
gtccttgaatttctgtgcagtccggatgacgactctcgccattcggagaggcaacaggtc
cttttagaattgctccaggcaggagggatagtacagttcgaagagagccgtcttatccaa
atggcagaaaaagctgaattctatcagatttgtgagttcatgtatgaacgagagcttcgc
tatgacaaaataattggctgttacctgcgtgatccagtgagaaaggaagaagttttcaac
tatattcacaacatcctgtccatgcctggctacagtgctgaagaaaagcagtcagtgtgg
cagaaagctttggaacatatagaggagttgctgttgctgagcccatgtaaagcagccgac
ttggtagccattcacttcagtgagcagattgagggcatcattacaaaccttcaggatcaa
ttcttactcttccagtttctgaggagtctccttgatccaagagaaggcattaaccaggac
ctgatacacttaccaccctgcatcactgagcagttcattgagttgctttgtcagtacagc
ccagaccaggttttggaaacgcttaaagttctggaatattgcagactggaagaaaccatc
cagataacccagaaacatcagctccatgaatcttcttcatatttattggagaagaaggga
gatatacatggtgcctttttggttatgcttgagcgattgcagagcaagttgctgatgctt
acgcaggatgatgaaagctcagctgaactccccttgttagaagacattgaagatacctta
atgaaaacaattgccctttgccagcgaaattcacacaatttagaccagcaacagcgagag
gccctctggtttcccctgctggaggctatgatgtccccacagaaattatctggttcttca
cagtgtcgatactccgaatctttgaagagtttgacaatgcaagtgctgaacaacatggct
gcatttatcgctcttccttcaatcctgcagagaattctacaggatccagtttatggaaaa
gggaaacttggagaaattcaaggacttgtcctgggaatgctggacacttttaactatgaa
caaacccttttagagacaactacgaatcttttgaaccatgatctccactggtccctgtgt
aacctcagagcttctgtcactagagggcttaccccaaagcaagattactgctgcatttgt
ctacaacagtacaaaaggcggcaagaaactgctgatgaaatcattgttttcagctgtggc
cacttgtaccattcactgtgtctgctgagtaaagagtgtgggacggtaactaagggcctg
atgaggtggatgtgctataaatgcaactcaagtaacaagggaggaagactgatcgagaac
ttctcagagctcaaaaagggaagtggagcatccttggcccagacaagttcagaatctctg
ttggatcctcagcaaatccaagcctttgaccagctctgccgactcaaccgaggaacctcc
agactggctctcctgacagaactgtctcgcggccacggtggtgaaaagcacgggctgctc
agcgtttcccacggggacccggccaccagcagtgtcttccagaacgagaacttccagctc
catctggccccccctccgctggctgaggactag
DBGET
integrated database retrieval system
