Tyto alba (Barn owl): 104358027
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Entry
104358027 CDS
T07816
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104358027 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tala01009
]
104358027 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tala04515
]
104358027 (PCDH11X)
Protein phosphatases and associated proteins [BR:
tala01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104358027 (PCDH11X)
Cell adhesion molecules [BR:
tala04515
]
Cadherins
Protocadherins
104358027 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
K319L-like_PKD
Fibulin_C
Cadherin_4
TMEM154
Big_9
Motif
Other DBs
NCBI-GeneID:
104358027
NCBI-ProteinID:
XP_032838622
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAVDPDIGVNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFYFSNQISSLAKRMFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSANPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVIASDHGLHRLVIKVNDLGQPESLYT
VALVHLFVNETVTNSSYVQELVRRNMETPVGQNVGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGP
IHTRQHTKEMGRPQTPLKETTLEPWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPTSGA
STSHPLPLGFPQEEYYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILG
HSDNCWMPPSLTQYQQSNTPLPSFGFQQGWGRGARPEGRHTLGRPLPKDDTDKGQGGPRP
QFYNTCERHCASEDPVKVIPLANFAASHQAPVSGSSTMFIHEHQL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcttattagcctgtattgtatttcaa
tctggcgcacaggagaagaattatactgtacgggaagaactgcctgaaaatgtcctcatt
ggcaatttgctcaaggatcttaacctaacgctggacccagatgtgcccctttcctcaccg
ctacagttcaagcttgtgtataagactggggatgtacctttagtacgggtggaggagaac
actggtgagatattcacaactgcaaaccgcatagaccgagagaagttgtgctctggcatc
tttagtgagaatcgctgcttttatgaggtggaggttgctgttttgcctgatgaagttttc
agactggtcaagatcagattcctaatagaggatataaatgacaatgcccctctcttcccc
tcaacagttattaacatctctatccctgaaaacacagcaatcaattctcgctattctgtc
ccatctgccgttgatccagacattggtgtgaatggtattcaacattatgaactccttaag
cccaaaacagctccgaaaaggacatttggatccattacaaatgatcagggtcaaaatgta
tttggtcttgatataattgagacacccgagggagataagtggcctcaactgattgtccaa
cagatcctggatagggagcagaaggatacctatgtgatgaagattaaagttgaagatggt
ggaagccctccaagatctagcactgccatcctgcaagtcacagtgactgatgtgaatgat
aatcgcccagtcttcaaagagaatgacattgaagttagtgttccagaaaatgctccagtg
ggcacctcggtttctcagctccatgccactgatgcagacctgggctcaaatgcacaaatc
cacttctatttcagcaatcagatctccagtttggccaaaaggatgtttgccattgataac
accactggcctcatcactataagagaaccactagacagggaggaatctcctgtacacaaa
ttaactgttttggcaagtgatggcagctcaactccatcaagagcaacagtgactgttaat
gtcacagatattaatgacaatgtcccatcaatagacacgagatatatcatcaatccagtg
aatgggacagtgcttttgtctgagaaggctccccttaatacaaaaatcgcactgataaca
gtaatggacaaggatgctgatctgaatggcaaagttacttgttttacagatcatgatgtc
ccttttaggctaaagccagtgtttgataaccagtttcttctggagacagccacatttcta
gattatgaagccactagggaatatgccattaaaatagtggcttcagattcagggaaacct
cccttaaatcagtccgcaatgctcctgatcaaaattaaagatgaaaatgacaatgcccca
gtttttacccagcctatcataggactttccatccctgaaaacaatgctcctggaactcag
ctaaccaagataagtgctacagatgctgacagtgggcgtaatgctgagatcagctatatc
ctgggttctgatgcaccccctattttcaaccttgaccgccgtacaggcattctgacagca
gtgagaaagctggacagagaaaagcaagacaggtactccttcactgtgctggctaaggat
aacgggatgccacccttgcagaccaatgctactgtgacagtgtcagtcctggaccagaat
gataacagccctgctttcacacataatgaatataatttttatgtgccagaaaacttaccc
atgtatggcacagtggggcttattacagtaacagatgctgactcgggagagaatgctgca
gtcactctctctatattaaatggtagagataatttcattatagatccacttactggtgta
ataagacctaatattacctttgatagggaacaacaggggtcatatactttccaggtgaaa
gctgtggatggaggaagactgcagcgttcctcaactgccaaagtgaccatcaatgttgtt
gatgtaaatgataacaggcctgtttttgttattccttcatctaattattcctatgagttg
gttccaacatcagccaatccagggtctgtagttactaaagtctttgcagttgataatgac
acaggaatgaatgcagagctccgctatagcatcataggtgggaactcaaggggcttgttt
acaattgatcaattgacaggcaatattactttgaaagagaaggtaattgcgtcagatcat
ggcctgcacagactggtgataaaagtcaatgacctaggacagccagagtctctttatact
gtagctcttgtgcatttgtttgtcaatgagacagtcaccaacagttcctacgtacaagag
ctagtgcgcaggaatatggaaactccagttggccagaatgttggggatggtgagataacc
ccacaaaccaatgattatgtcaagatcatcattgccattattgcaggcactatgacagtt
attctggtaatttttgttactgctttagtacggtgccgccagacacctaggcacaaggtt
gtccaaaaaaacaagcaaagtggtgaatgggtttccccaaaccaagagaataggcagatc
aagaagaagaagaagaagaagaagcgctctccaaaaagtcttctcctcaactttgtgact
attgaagaatctaagcctgatgatcctggccacgagcatataaatggcactttagacatt
cctgtagagctagaagaacagactatgggaaaatataactgggcaaccacaccaaccaca
tttaagcccgatagtccagatttagcaaagcactacaagtctgcttctccacagcctacc
tttcaaattaaacctgagactcctgtaccccccaagaagcaccatgtcattcaggaactg
cctctagataacacctttgtggtgggctgtgattcactttccaagtgctcgtccagcagc
tcggacccttacagtgtttctgaatgcagctgtcaaggaggcttcaagaccccaggcccc
atacacaccagacagcacacaaaagaaatgggaaggccacaaactcctttgaaagaaaca
accttggagccttggactcagccacagcctcagcgccgtgtcacgtttcacctaccagat
ggctcccaggaaagctgcagtgacagtgggctcggagaccatgaacccacgagcggtgct
agcacatcgcaccctctgcccctcggcttcccccaggaggagtactatgagcaagcttca
cccaacagccggacagaaggagacggcaactcagacccggagtccactattgaagtaaat
ctccagaaagccctggctgaagcctctgaaacctgcacacaggagtgtctcatcctaggc
cattctgacaactgctggatgccaccttctttgacacagtatcagcagtccaacacgcct
ttgccatcgtttggcttccagcaaggctggggccgaggagccaggccggagggacggcac
actctcgggaggccccttccaaaggacgacactgacaaaggccagggtgggcccaggccc
cagttctacaacacctgcgaaagacattgtgccagcgaagaccctgtcaaagtcattcct
ctggcaaacttcgctgcgtcccaccaggcaccggtgtctgggagtagcactatgtttata
cacgagcaccagctataa
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integrated database retrieval system
