Tyto alba (Barn owl): 104358576
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Entry
104358576 CDS
T07816
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104358576 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tala03400
]
104358576 (MSH2)
DNA repair and recombination proteins [BR:
tala03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104358576 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
104358576
NCBI-ProteinID:
XP_032845209
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MAVEPAREAVWPEGAGAEAGFVRAVLSLPEKPDTTVRFFERGDYYTAHGADARLAARELF
RTRAVIRQLAGAPGTQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSKSIKENDW
YLAYKGSPGNLAQFEEVLFANNDMSTAIGVVGVKLSTADGQRLVGVGYVDTTLRKLSVCE
FPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLRQVIQRGGILITDRKKADFTTKDI
VQDLNRLLKSKKEEQMNSAALPEMEKQVAVSSLSAIIKFLELLSDESNFGQFELTTFDLS
QYMVLDNAAVQALNLFQSSVENANTAQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIE
ERLNLVEAFVVDPELRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRMYQAINQLPNV
VQALEKYEGAHQMLLLAVFITPLNDIYSDFSKFLEMIETTLDMDKVENHEFLVKASFDPN
LTELREKMNELEEKMQSFLKSAAKELGLEAGKSIKLETNSQFGYHFRITCKEEKVLRNNS
KYGIVDTQKNGVKFTNSKLSSVNDEYIKNREEYEEAQDAIVKEIINIASGYAEPIQTMND
VIAQLDGIVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGARHPCIEVQDEVAFIPNDITF
EKGKEMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILARVGAGDS
QLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYVATKIRAF
CMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFP
KHVIESAREKALELEEFQNIGKSKESEGEPPAKKFYREREEGEKIIQDFLCQVKALPLTD
MSEDDIKMKLKQLRNDVLAKNNSFVNEIISRTQVMSRKV
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagccggcgcgggaggcggtgtggccggagggcgcgggggccgaggcgggc
ttcgtgcgcgccgtgctctcgctgccggagaagcccgacaccaccgtgcgcttcttcgag
cgcggcgactactacacggcgcacggcgcggacgcgcggctggccgcccgcgagctcttc
cgcacccgcgccgtcatccggcagctggcgggggcaccgggaactcagaagcttgagagt
gttgtgcttagtaaaatgaactttgaatcttttgtgagagatttgcttctggttcgtcat
tacagagttgaagtttacaagaacaaagcagggagtaaatccatcaaagaaaatgactgg
tatttagcatacaagggttctccaggaaatcttgcccagtttgaggaagttctctttgcc
aacaatgatatgtcaacagccattggggttgtgggggttaagctgtctactgctgatgga
caaagactagtaggagtggggtatgtcgacactacgctgagaaaattgagtgtctgtgag
tttccagataatgatcagttctcaaaccttgaagctctactggttcaactaggaccaaag
gagtgtgtgctaccaggaggagagactgcaggagagatgggaaaactacgacaagtcatt
cagaggggaggcattctgattacagacaggaagaaggcggatttcacaacaaaagatatt
gttcaggatctcaatcgcttgttaaaatcgaagaaagaagaacaaatgaatagtgcagca
ttgccagagatggaaaagcaggttgctgtttcgtctttgtcagccattatcaagttttta
gagttactgtcagatgagtctaattttggacaatttgaactgactacttttgatcttagt
caatatatggttctagataatgcagctgttcaagccctcaacctttttcagagttctgtg
gaaaatgctaatactgcacagtctctagccggtttactaaataaatgcagaacccctcaa
ggacaaagattagttaatcagtggatcaaacaaccacttatggacaagaatagaattgaa
gaaaggttgaatttggttgaagcttttgtggtggatccagaactacgtcagtgccttcaa
gaagatctcttgcgtcgcttcccagatcttaaccggctggcaaagaagtttcagaggcaa
gcagcaaacttacaggactgttaccgaatgtatcaggctattaatcaactgcctaatgtt
gtacaagcactggaaaaatatgaaggagctcaccagatgttgttgttggcagtgtttata
acacctcttaatgatatctactctgacttctcaaagtttctggagatgatagaaacaaca
ttggacatggataaggtggagaatcatgaatttcttgtcaaggcttcttttgatcctaat
ttgacagaattaagagagaagatgaatgaactggaagaaaaaatgcagtcctttttaaag
agtgcagccaaagaactaggtttggaagctggcaaaagtatcaaactggagacaaattca
cagtttggatatcactttcgaataacttgcaaggaggaaaaagttctccgtaacaattca
aaatatggaatagttgatacgcagaagaatggtgtgaaatttactaacagcaaactcagc
tccgtcaatgatgaatatataaagaacagagaagagtatgaagaggctcaggatgcaatt
gttaaggaaatcattaacattgcttcaggttatgcagaaccaatacagacaatgaatgat
gtgatagctcaattagatggaattgtcagttttgctcatgtgtcaaacggggcaccagtg
ccgtatgtccgtcctgtcattctggaaaagggacaaggaaggattgtgctgaaaggtgcc
aggcatccttgcattgaagtgcaagatgaggtggccttcattcccaatgacattacattt
gagaagggcaaggagatgttccacattattactggccccaacatggggggaaaatcaacc
tacattcgacagacaggggtgattgttcttatggcccaaattgggtgttttgtaccgtgt
gactctgcagaaataaccattgtggattgtatcctggctcgggtgggagctggagacagt
cagctgaaaggcgtgtctactttcatggctgaaatgttagaaactgcgtcaatccttagg
acagcatctgaaaactccctgataatcattgatgagctgggaagaggaacttctacctat
gatggctttggcttagcatgggctatttcagaatacgttgctaccaaaatccgtgctttc
tgtatgtttgctacacattttcatgaactgacagctcttgctgaccaagtgccaacagta
aataacctacatgttactgctctgaccagtgatgacacactgacaatgctttatcgtgtc
aaggaaggtgtttgcgaccagagttttggcatacacgtagcagagttggcagctttccca
aaacatgtgatagaaagtgcaagagagaaagcattggagctggaggagtttcaaaacatt
ggcaagtccaaggaatctgaaggagaaccaccagccaagaaattctacagagaaagagag
gaaggtgaaaagataattcaggattttctttgtcaagtgaaagcgttgcccctgacagat
atgtcagaagatgacatcaaaatgaagctgaaacagctgagaaatgatgtgttggcaaag
aacaacagttttgtgaatgaaataatttcccgaacgcaagttatgtcacgaaaggtgtga
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