Tyto alba (Barn owl): 104358876
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Entry
104358876 CDS
T07816
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104358876 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tala03021
]
104358876 (POLR1A)
Enzymes [BR:
tala01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104358876 (POLR1A)
Transcription machinery [BR:
tala03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104358876 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Pox_C7_F8A
HMG_box
BUD22
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-GeneID:
104358876
NCBI-ProteinID:
XP_032843286
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MGPPKVVPWRRLVGVSFGMYTAEEIRKLSVKPITNPQYLDNVGNPAINGLYDLALGPPDS
REVCATCMQNFSNCPGHFGHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCTRAVVHLL
LSQLKVLEKGLLHAVHDLEVILNRFLEQCADATGSEIEEELNRHVQEMLQSYQIRDQCSN
VKNVCECRNTLIAQFWKAHMGSKKCPNCKSRRSLVRKEHNSKLTVTYPSTVYRKSGEEGV
LDDPAAIDESQLGKRGYLTPMTAKEYILALWKNEGFFLRYLFSGMDPHDSSGFSPDMFFL
DLLVVPPSRYRPVNRVGDRLFTNGQTVNLQAVMKDAKMIRKLLVFMAKEQCPPIKIASEI
QTETEENNEPLDHSVLTMIPGQTIADKLYNAWIRLQSHVNIVFDSDMDKLMTEKYPGIRQ
LLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKE
LRQAVINGPKVHPGASMVINEDGSRTALSASSLTQREALAKQLLTPSSGAPQSGLKIVCR
HIKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYTLAFTDEQYLVPKDGKPLPGLIQDHMISGVSMTIRGCFFTREQYMELVYRG
LTDKKGRIKIFPPAIMKPQQLWTGKQVVSTLLINIIPENHIPLNLTGKAKIGGRAWVKGP
ANRCLNLDSMCESQVIIRNGELLCGVLDKAHFGSSAYGLVHCCYEIYGGKTSGKVLTCLG
RLFTAYLQLYRGFTMGIEDLLVKPAADHKRKKIIKKSSQHGIEAVRAALNLPETASCEEV
QGKWQDAHLCKDQRDFNMVDLKFKEEVNNYNNEVNKVCMPLGLHRSFPENNLQLMVQSGA
KGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKPS
EFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVIQYDLTVRDSDGSVVQFLYGED
GLDIPKTQFLQREQFPFIAENYEVIQKTNHLDEALARMESHQAKQQFKAIKKWQARHQNS
VQREGGFLLFSQKKMASVKAQIPGGEIKNGRDPATLQLLKMWYELDEKKRRKYLKKTNKC
PDPSLGIWRPDTYFASVSETFENGVEEYIKKWESENRLNYMHPALSSDRLKDLLYLKWQR
SLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTP
TMSVPVFNTKKALKKVKQLKKQLTRVCLAEVLQKVEIEESLRVKCKLNKHRLYKIKFHFL
PHEYYREEKCVKPREILHFMETRFFKIFLDAIKRKNAKLASFTEVSVRKATQKDLDGDQD
KTQQNEEAQAEEEENIVDAEADEGDGDATEAKRRKNQEEEVDYESEEENGEENVDETIED
EEAESEKEEMSPGAEEDQNRADGDESQQPSSMSQTKKGKDRSLQSAKLRVNAVLNSHPSI
QDYIFDTENELWCEVSLTLPLMKVYFDLSSLLVSLARSTVIHEVKGITRCLLNESTNKQG
EKEIVLHTEGINLVELFRYSDILDLNRLYSNDIHAMAKNYGIESALSVIIKEIKDVFAVY
GIVVDPRHLSLVADYMCFEGFYKPLNRFGIQSNSSPLQQMTFETSYKFLKEATMMGAHDE
LRSPSACLVVGKVVRGGTGLFDLKQPLT
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggggccgccgaaagtggtgccgtggcggcggctggttggagtctccttcgggatgtac
acggccgaggagatcaggaaactgagtgtaaaacccataacaaatcctcagtatttggat
aatgtggggaatccagccattaatggactatatgacttggctttgggacctccagactcc
agagaagtgtgtgcaacttgcatgcagaacttcagcaactgccctggtcattttggccat
atagaactgcctctgactgtttataaccctctgttttttgataaattataccttctaatt
cgaggttcttgtttaaattgtcacatgctgacatgtactcgagctgtggttcacttactg
ttaagtcagctgaaggttctggagaaagggttgcttcatgctgtccatgatcttgaagtc
attctgaacaggtttttagagcaatgtgcagatgcaacaggttcagaaattgaagaagag
ttaaatcgtcatgttcaggaaatgttacaaagctatcaaataagagatcagtgttcaaat
gtcaaaaatgtatgtgagtgtagaaatacattgatagcgcagttctggaaagcacatatg
ggttcaaagaaatgcccaaactgcaaatctaggagatcactagtgcgaaaagagcataac
agcaagctgacggtaacctatccttctacagtgtaccgtaagtcaggagaggaaggagtt
ctggatgatccagcagctattgatgaaagccagttagggaagagaggatacctgacacca
atgactgccaaggaatacatcctggctctgtggaagaacgaaggtttctttttgcgttac
ctgttctctgggatggatccccatgacagctcaggattcagtccagatatgtttttttta
gatctacttgtggttccaccttcaaggtatcgtcctgtaaatcgtgttggagaccgactg
tttacaaatggtcagactgtgaacttgcaagctgtcatgaaagatgccaaaatgatacgg
aaactgttggttttcatggcaaaagaacaatgtccaccaataaaaattgcatcagaaatc
caaacagagacagaagagaataatgaacctctggaccattctgtcctgacaatgattcca
ggacagaccattgcggataagctgtacaacgcttggattcgtcttcagagccatgtcaac
attgtatttgatagtgacatggacaaactaatgacagaaaaataccctggtattcgtcag
ctattagagaaaaaggaaggactgttccgcaagcacatgatgggaaagcgtgtggatttt
gctgctcgatcagtcatttgcccagatatgtatattggtaccaatgagattggcattcct
atggtatttgctaccaaactgacttatccacagccagtcactccctggaatgtcaaagag
ctgaggcaggctgtcataaatggcccaaaggttcaccctggggcctccatggtcataaat
gaagatggatctcgtacagcgctgagcgcgagcagcctgacgcagcgggaagccttagcg
aagcagctcctcactccttcttcaggcgcgccccagtcaggactgaagattgtatgtcga
catattaaaaatggtgatgtccttttactgaaccgccagcccactcttcacagaccctcc
atacaagctcaccgggcccgaatcctgcctggagaaaaagtgctgaggcttcactatgcc
aactgtaaggcttacaatgctgattttgatggtgatgaaatgaacgcccattttccacag
agtgagctgggtagagcagaagcctacactctagcctttactgatgaacagtacctggtt
ccaaaggatgggaagccacttcctggcttgatccaggatcacatgatttctggagtcagc
atgacaatccggggctgctttttcaccagagagcaatatatggagcttgtttaccgagga
ctaacagacaaaaaaggaagaattaaaatctttcctcctgccattatgaaaccacagcaa
ttatggacaggaaaacaggttgtttctacattgttaataaacatcattccagaaaaccac
atcccgctgaatttgactgggaaagctaagattggtggaagagcctgggtaaagggacct
gcaaacagatgtctaaatcttgattcaatgtgtgaatctcaggttattattagaaatggg
gaattactgtgtggagtcttggacaaagctcactttggcagctctgcctatggcctggtc
cactgttgctatgaaatctatgggggtaaaaccagtgggaaagtgctaacatgtctagga
cgtctctttactgcttatctgcagctgtacaggggatttacaatggggattgaagatttg
ttggttaaacctgcagcagaccacaaaagaaaaaaaatcatcaaaaagtcaagccagcat
ggtattgaagctgttagagctgctcttaatttgccagaaacagcatcatgtgaggaggtc
caagggaaatggcaggatgcccatctctgcaaagaccagagggattttaacatggttgat
ctgaaattcaaggaggaagtaaacaattacaacaatgaagttaacaaggtttgtatgccc
cttggtctccacaggagctttccagagaacaatttgcaattgatggtacagtcgggagcc
aaaggatccactgtaaatacaatgcagatttcttgtttgttgggccagattgagttggaa
ggtagaagacctccactgatggcatctggcaaatcactgccatgtttccagccttacgat
ttttcccctagctcaggaggatttgtgacaggcagatttctcactgggatcaaaccgtct
gaattcttctttcattgcatggctggcagggaaggtcttgtggatacagctgttaaaacc
agccgttctgggtacctacaaaggtgtatcataaaacatttggaaggactggtaattcag
tatgacctgactgtacgagatagtgatggtagtgtggtacagtttctttatggagaagat
ggacttgatatccctaaaactcagttcttacaacgtgagcagtttcctttcattgcagaa
aactatgaggtaatccagaagacaaatcatctggatgaagccttagcaaggatggagtct
caccaagctaagcagcaattcaaagccatcaaaaagtggcaagccaggcaccaaaactct
gtgcaaagagaaggaggttttctgttgttttcccaaaagaaaatggcaagtgtaaaagca
cagattccaggaggagaaatcaaaaacggaagagatcctgctactttacagttattgaag
atgtggtatgaactagatgagaagaaacgaaggaagtatttgaagaagacaaataagtgt
cctgacccaagccttggtatttggcgtccagatacttattttgcatctgtttcagaaaca
tttgaaaatggagttgaagagtatatcaaaaaatgggaatcggagaacagactaaattat
atgcacccggcactttcttctgatagattaaaggatttgttgtatttaaagtggcagcga
tctctctgtgatccaggagaagctgtgggacttcttgcagctcagagtattggggaacct
tccacacagatgactctgaacactttccactttgctggcagaggtgaaatgaatgtcaca
ttgggtattccaaggttgcgggaaatattgatggtggccagtgcaaacattaaaacacca
acgatgagtgttcctgtgttcaataccaagaaagctctcaagaaggtgaaacagcttaag
aaacagctcacaagagtgtgtttagctgaggttttgcagaaagttgagatagaggaatcc
ctgcgcgtgaagtgcaaactgaacaaacatcgcctctacaaaatcaaattccatttcttg
ccccatgagtactaccgagaggagaagtgtgtgaagcccagggagatcttgcacttcatg
gaaacaaggttctttaaaatttttctggatgcaattaaaaggaagaatgcaaagctggca
tcttttactgaagtcagcgtccggaaggcaactcaaaaagatttagatggtgaccaagac
aagacacagcaaaatgaggaagctcaagcagaggaagaagagaacattgttgatgcagaa
gctgatgaaggggatggcgatgctacagaagcaaaacggaggaaaaaccaggaagaagag
gttgattatgagagtgaagaagagaacggggaagaaaatgttgatgagactatagaagat
gaagaggctgaatcagaaaaagaagaaatgagtcctggtgctgaagaagatcaaaataga
gcagatggtgatgaatctcaacagccttcatctatgtctcagactaaaaaagggaaagat
cgatcacttcagtcagcaaagttgcgagtaaatgctgttctgaacagccacccatcaata
caggattatatatttgacactgaaaatgaactttggtgtgaggtttccttgacgcttccg
ttgatgaaggtgtactttgatctctcctccttgctcgtgtctcttgcacgaagcacagtc
attcatgaagtgaaggggatcacacgttgcttgttgaatgaaagtaccaataagcaagga
gagaaggaaattgttctgcataccgaagggataaaccttgtggagctgttcagatattct
gatattctggacctgaacagactttattccaatgatattcatgccatggctaagaattat
ggaattgagtctgccctgagcgtgattataaaggaaataaaagatgtatttgctgtatat
ggaattgtggtagaccctcggcacctttcacttgtggcagattacatgtgttttgaagga
ttttataaaccgctgaatcgttttggaattcagtccaactcctcccctctgcaacagatg
acatttgaaaccagctacaaattcttgaaggaagcaacaatgatgggtgcccatgatgaa
ctgcgatccccttctgcatgcctagtggttggaaaagttgttagaggagggactggtttg
tttgacctcaagcaaccccttacatag
DBGET
integrated database retrieval system
