Tyto alba (Barn owl): 104359717
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Entry
104359717 CDS
T07816
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
tala
Tyto alba (Barn owl)
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tala03019
]
104359717 (HTT)
04131 Membrane trafficking [BR:
tala04131
]
104359717 (HTT)
03029 Mitochondrial biogenesis [BR:
tala03029
]
104359717 (HTT)
Messenger RNA biogenesis [BR:
tala03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104359717 (HTT)
Membrane trafficking [BR:
tala04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
104359717 (HTT)
Mitochondrial biogenesis [BR:
tala03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
104359717 (HTT)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
104359717
NCBI-ProteinID:
XP_032843211
LinkDB
All DBs
Position
Unknown
AA seq
3095 aa
AA seq
DB search
MATMEKLMKAFESLRSFQQQQGPAAIPEEPLQRPKKELSTTKKDRVNHCLTICENIVAQS
LRNSPEFQKLLGIAMELFLLCSEDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEI
KKNGASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPK
IMAAFGNFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRMQYFYAWLLNV
LLGLLVPVEDDHPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQL
IQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPELLHALTTSGGIAQVSVSKDESASR
NRSGSIVELIAGGGSSCSPVLARKHKGKILLGEEEGLEDDPETRSDVSAASFAASMKGEI
TSELASSSGVSTAGSVGSSAADPTGHDIITEQPRSQHTLQSDSVDLTSCDLSSTATEGEE
DDVLSRSSSQISAVQSDPAMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLEGA
EGQYSGMQIGQLQDEEDEAANILQDDSSESFRNSSIALQQPHLLKTMSHSRQPSDSSVDR
FTPKEDAADTGDHENKPSRVKGDIGHYTDGNSAPLVHCVRLLSASFLLTGEKGALVPDRD
VRVSVKALAVSCVGAAIALHPESFFSKLYKTPLEAMGEEYEEQYVSDILNYIDHGDPQIR
GATAILCGTIVNSILIKSRFDVDKWLINVRSSTGNLFSLVDCIPLLQKTLKDESSVTCKL
ACTAVRHCIMSLCSSSYSELGLQLIVDLLTLKNSSYWLVRTELLETLAEVDFRLVSFLEG
KTESLHRGIHHYTGLLKLQERVLNNVVICLLGDEDPRVRHVAAASLMRLVPKLFYNCDQG
QADPVVAVARDQSSVYLKLLMHETQPPSHFAVSTITRTYRGYNMLQSPTDVTMENNLSRV
IAAISHALTISTTRALTFGCCEALCLLSTTFPVCTWSVGWHCGVSQPSPSDEAQKGCTIG
MAGMILSLLSSAWFPLDLSGHHDALILTGNLLAASAPRCLKNPWSAEEDSNQGATKQEEP
WPALADRTLVTLVEQLFSHLLKVINICAHVMDDVAPGPAVKAALPSLTNPPSLSPIRRKG
KERESVEQASVPMSPKKGETSPATRQTDATGPVPTSKSSSVGSFYHLPSYLKLYDVLKAT
HANYKVTLDLQNSNEKFGCFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFNREPT
MATVCVQQLLKTLFGTNLASQYDGLSSNPNKAQGKAQRLGSSNLRPGLYHYCFMAPYTHF
TQALADASLRNMVQAEQEHDASGWFDVLQKVSTQLKTSITSAAKHRADKNAIHNHIRLFE
PLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQ
FRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIV
HDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRL
SRQIADIILPMLAKQQMHIDSHDALGVLNTLFEILAPSSLRPVDMLLRSMFVTPKTMASV
STIQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISCQAINKLRHGENNVSTPED
CTEVKQPKYLPEETFSRFLLQLVGILLEDIVTKQLKVDMNEQQHTFYCQELGTLLMCLIH
IFKSGMFRRITAAATRLFTGDGSDGSFYTLESLSDLVQSMIPTHPSLVLLWCQILLLVNY
TNYNWWSEVHQTPKRHSLSTTKLLSPQISGDSDESDSESKRGMCNREIVRRGALILFCDY
VCQNLHDSEHLTWLIVNHVQDLINLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLA
APTTLKKTLQCLEGIHLSQSGAVLTLYVDKLLCTPFRVLARMVDTLACRRVEMLLAATLQ
NSITQLPVEELDRIQEYLQNSGLATRHQRLYSLLDRFRLMVAPDTTSPSPLVTSHPLDGE
DQPALESVILDKDWYVSLVRSQCCIKSDSALLEGAELVNRIPQPDLNSFMTSKEFNLSLL
APCLSLGMNELSRDQKSSFFETARRVTLDHVSNTVQNLPANHQVFQPLLPTEPSAYWKKL
SEIFGDEVVYQSMMTLCRALAQYLLLLSKLPAALRVPPDKEDDILKFVVMSVEALSWHLM
HDHIPLSVDLQAALDCCCLTLQQPSLWNLLASAANVTYACSLINCIRFIIEAVAVEPGNQ
LLSPERKKNASKGLSEGEVDSNTQKTKHITTACEMVAEMVECLQTVLALGHKRNSSIPAF
LTPVLKNIIISLARLPLVNSYTRVPPLVWKLGWSPKPAGDFGTVFPEIPVEFLQEKEIFK
EFIYRINTLGWISRTQFEETWATLLGVLVTQPIVMDQEENQQEEDTERTQINVLAVQAIT
SLVLSAMTIPVAGNPAVSCLEQQPRNKALKALDTRFGRKLSVIRGIVEQEIQAMVSKRDN
IATHHLYQAWDPVPSLSPATTGALISHEKLLLQINTEREIGDMDYKLGQVSIHSIWLGNN
ITPLREEEWGEDEEDENDIPAPSSPPTSPINTRKHRAGVDIHSCSQFLLELYSQWILPSN
PSKRTPVILISEVVRSLLAVSDLFTERNQFEMMYTTLTELRKVHPSEDEILVQYLIPATC
KAAAVLGMDKAVAEPVSRLLESTLRSTHMPSRIGALHGILYILECDLLDETAKQLIPIIS
EYLLSNLRGVAHCVNIHNQQHILVMCAAAFYLIENYPLDVGPEFSAGIIQMCGVMVSGSD
ESTPSVIYHCVLRGLERLLLSEQLSRLDSESLVKLSVDRVNVQSPHRAMAALGLMLTCMY
TGKEKISPSRTTDANPTAPDSESVIVAMERVSVLFDRIRKGFPFEARVVARILPQFLDDF
FPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRT
PVAMAMWSLSCFFVSASTSQWISAILPHIISRMGKSEQVDVNIFCLVAIDFYRHQIDEEL
DRRAFQSVFEVVASPGTPYHRLLSCLQNVHKVTAC
NT seq
9288 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagctgatgaaggccttcgagtcgttgcgctccttccagcagcag
cagggcccggctgccatccccgaggagccgctccagagaccaaagaaagaactttcaact
accaagaaagatcgagtgaatcattgcctaacaatatgtgaaaatatagttgctcagtct
ttaagaaattctccagaatttcagaaactgctgggcattgctatggaactctttctcctc
tgcagtgaggatgcagaatctgatgtccggatggttgctgatgaatgccttaataaagtt
attaaagctttgatggattccaatcttcctaggttacagttagaactgtataaagagatt
aaaaagaatggtgcttccagaagtctacgtgctgcactctggagatttgctgagcttgcc
catctagttcggcctcaaaagtgcaggccgtacttagtgaaccttttgccctgtctaaca
cgaataagtaagagaccggaagaatcagtacaagagacactggctgcggcaataccaaaa
atcatggcagcgtttggcaattttgcaaacgacaatgaaattaaggttttattgaaggct
ttcatagctaatcttaaatccagttcccctactatccgtcgaacagcggcaggatcagca
gtaagcatctgtcaacattcacgaagaatgcagtatttttatgcctggttattgaatgta
cttttaggcttgttggttcctgtggaggatgatcatcctactcttttaattctgggtgtt
ttacttacactaaggtatctcatacctttattgcaacagcaagtaaaagataccagcctg
aaaggcagttttggtgtaacaagaaaagaaacagagatttcaccttcaccagaacagctt
atacaggtttatgaactgactctgcactatacccaacatcaggaccataatgttgtgact
ggagctttagaattattacaacagctctttagaacaccgccacctgaacttctccatgcc
ctgaccacttcagggggcattgcacaggtcagtgtatccaaagatgaatctgccagcagg
aaccgcagtgggagcatagtagaacttatagctggaggggggtcttcatgcagccctgtt
cttgcaagaaagcataaaggtaaaatacttcttggtgaggaagaaggtttggaggatgat
cctgaaacccgatcagatgtcagtgctgcatcatttgcagcttctatgaagggtgagata
accagtgaactagcttcttcatcaggtgtgtcaacagctgggtcagtagggagttcagct
gctgatcctaccggacacgatatcattactgagcagccacgttctcaacatacgttgcag
tcagactctgtagacctgacaagttgtgatttgtcaagtacagctactgaaggggaagaa
gatgatgtgcttagtcgaagctccagccagatcagtgctgtccagtcagatcccgctatg
gacttgaatgatggtacacaggcttcctcaccaattagtgatagctctcagactactaca
gaaggtccagactctgctgtaaccccttcagacagttctgaaattgttttggagggtgct
gaaggacagtattctggaatgcaaattgggcagctgcaggatgaagaagatgaagctgca
aatattctccaagatgattcatcagagtctttcagaaattcttctattgctcttcaacag
cctcacctgttgaaaaccatgagccacagcaggcagccttctgatagcagcgtagataga
tttacaccgaaagaagatgcagcagatactggtgatcatgaaaacaagccctccagggta
aagggagacataggtcactataccgatggaaattctgctcctctagttcactgtgttaga
cttctgtcagcctcttttctgcttactggcgagaagggagctttagttcctgatagagat
gtgagagtcagtgtaaaagccctggcagtaagttgtgttggagcagccattgcgcttcac
cccgagtctttcttcagcaaactgtataaaacaccccttgaagcaatgggagaagaatat
gaggagcagtatgtatcggatattctgaactacattgaccatggagatccccagattaga
ggagctactgcaattctgtgtggaacaattgtcaactccattctaattaaatcccgcttt
gatgtggataaatggttgataaatgtcagaagctcaacaggaaatctcttttccttggta
gactgcatacctctgttacagaaaacactgaaagatgagtcctctgtcacatgcaaactg
gcttgtacagctgtgaggcattgcatcatgagcttatgtagtagcagttacagtgaacta
ggtttacaattaattgttgacctgcttacactgaagaatagctcatactggctagtaagg
acagaacttctggaaacgcttgcagaggtagattttcggctagtcagcttcttggaagga
aaaactgagagcttgcacagaggtattcatcattatactggtctactaaaacttcaggag
agagtgcttaataatgttgtaatatgtcttcttggagatgaagatccaagagtgagacat
gtagctgcagcttcattaatgaggcttgttccaaagctattttataactgtgatcaagga
caggctgatccagttgtggcagtagcaagagaccaaagcagtgtctacctgaaactacta
atgcatgaaacacagcctccgtctcactttgcagtaagcactatcaccagaacatacaga
ggttacaatatgctgcaaagtccaacagatgtcactatggaaaacaatctctcaagggtt
attgcagcaatttcccatgcattgacaatatccactacaagagcactcacgtttggctgc
tgtgaagctttgtgtcttctctccaccacatttccagtctgcacctggagcgtgggatgg
cactgtggtgtttcccagccaagtccttcagatgaagctcagaagggctgcaccattgga
atggccggcatgatcctgtctctcctttcatcagcatggttcccactggacctctctgga
catcacgatgctttgattttgactggaaacttgcttgcagcaagtgctcccaggtgctta
aagaatccctggagtgctgaagaagattcaaaccagggtgctacaaagcaggaggaaccc
tggccagctctggcagatcgaactcttgttactttagtagaacagctcttttctcatctg
ctgaaggtcattaatatttgtgcacatgtaatggatgatgttgctcctggcccagcagta
aaggcagcattaccttctctcacaaacccaccttctcttagtccaattcggaggaagggg
aaagagagggaatctgtcgaacaggcatcagtgccaatgagccctaaaaagggtgaaaca
agtccagctactaggcaaacggatgctactgggcctgttccaacaagtaaatcttcttca
gtaggaagcttttatcatcttccatcatatctgaagttatacgatgttttgaaagcaacc
catgctaattataaggttactttggatctccagaacagtaacgaaaagtttggatgtttc
ttacggtctgccttagatgttctgtcccaaatcttggaacttgctactcttcaagacatt
gggaagtgtgtagaagaaattttgggatacctgaaatcatgtttcaacagagaaccaaca
atggcaacagtttgtgtacagcagttactgaaaacattatttgggacaaatctggcttct
cagtatgatggcttgtcttcaaaccccaacaaagctcaaggcaaagctcagcgcttaggt
tcttccaatttgagacctggtctctatcattactgctttatggcaccatacacacacttt
acacaggcccttgctgatgcgagtctaaggaacatggttcaggctgagcaggaacacgat
gcctcaggatggtttgatgtgctgcaaaaagtttctacacagctgaaaactagcattacc
agtgcagcaaaacatcgtgctgataagaatgctattcacaatcacattcgtttatttgaa
ccccttgtcataaaagcattgaaacaatatactacaacaacatcagtacagctgcagaga
caagttctagatttacttgctcaactggttcagctacgagttaactactgtcttctggat
tcagatcaggtgttcattggatttgtgctaaagcagtttgaatacattgaagtaggacag
ttcagggaatctgaagcaattattcctaatatcttttttttcctggtgttgctgtcttat
gagcggtatcattccaaacaaataattggaattcctaagatcattcagctgtgtgatggt
atcatggccagtggaaggaaagctgttacacatgcaataccagctctgcaacccattgtt
catgatctctttgtcttaagaggaacaaacaaagctgatgctggaaaagagttggaaaca
caaaaggaagtggtagtgtcaatgctgctgagacttattcaataccatcaggtgctagaa
atgttcatcttggtattgcaacagtgtcataaagaaaatgaagacaaatggaaaagattg
tctcggcaaatagctgacattattctcccaatgcttgcaaaacaacagatgcatatagac
tctcatgatgctctgggagtgctgaacactttgtttgaaattttggctccttcatccctt
cgccctgtagacatgcttttaaggagtatgtttgttactcctaaaacaatggcatcagtg
agcactatccagctgtggatttctggaattctagctatccttagagttctgatttcacag
tcaacagaagacattgttctatcccgtatacaagagctttccttctcaccatatttgatt
tcatgtcaagcaattaacaaacttagacatggagaaaataacgtatccacaccagaggat
tgcactgaggttaagcagcctaagtatctgcctgaagaaacgttttctaggttcttgcta
caactggttggcattctattggaagatattgttaccaaacagctgaaagtggacatgaat
gagcaacagcatactttctactgccaggagctgggcacactgcttatgtgcttaatacat
atcttcaaatcagggatgtttagaagaatcacagctgcagccaccagactttttacagga
gatggatctgatggtagtttctatacacttgaaagtttgagtgaccttgttcagtccatg
attcccacacatccttctttagttctcctctggtgtcaaatccttcttcttgtcaattat
acgaactacaactggtggtcagaagtgcatcaaaccccaaagagacacagtctttctact
actaaattgcttagccctcagatatctggagacagtgatgaatcggattcggaatctaaa
cgtggcatgtgcaatcgagagatagtgagaagaggagcgctcattcttttttgtgactat
gtttgtcaaaacctacatgattcagaacacttgacctggcttattgtgaatcatgttcaa
gacttgattaatctgtcccatgagcctccagtacaagacttcattagtgctgttcacagg
aattcagcagccagtggtctcttcatccaggccattcaatcacggtgtgagaatcttgca
gctcccacaactctgaagaagactttacagtgtttagagggaatacatctcagccagtct
ggggctgtcttaacattatatgttgataagcttttgtgtactcctttccgtgtgcttgcc
cgtatggttgacacactggcttgccgtcgggtagaaatgcttttggctgcaactttacag
aacagcattactcagttaccagttgaagaactggatagaattcaggaataccttcaaaac
agtggattagcaacaagacaccaaagactttactcactcttggataggtttcgtcttatg
gtagcaccagacacaaccagtccttcacctctggttacctcgcacccactagatggagaa
gaccaaccagctttagagagtgtaattctagacaaagactggtatgtgtcactagtgagg
tcacagtgttgcatcaagtctgactcggcactgctagaaggtgcagagctggtaaatagg
attcctcagcctgacctgaactccttcatgaccagcaaggaattcaacctaagcttgcta
gcaccttgtttaagccttggtatgaatgaactctcgagagaccagaagagtagcttcttt
gaaacagctcggagagtaactctggatcatgtgtctaacactgtacaaaaccttcctgcc
aaccaccaggtttttcaaccactgttgccaactgagccatcagcctactggaaaaaacta
agcgaaatctttggagatgaggtggtgtatcagtctatgatgacactttgtcgtgcactg
gctcagtatttgttgttactctcaaaactaccagctgctctccgtgttcctcctgacaaa
gaggatgatatcctgaaattcgtagttatgtcagtagaggcactatcatggcatttaatg
catgaccacattccattaagtgtagatcttcaagctgctctggactgttgctgtctgaca
ttacagcagcctagtctctggaatttgctggcttctgcagctaatgtgacatatgcttgc
tccttaattaattgcattagatttatcatagaagcagttgctgttgaacctgggaatcaa
ctccttagtcctgaaagaaagaagaatgcttcaaaaggcttaagtgagggtgaagttgat
tcaaacacacagaaaactaagcacattaccacagcttgtgaaatggtagctgagatggtg
gaatgcttacagactgtcttagcactggggcacaaaaggaacagcagtatcccagcgttt
cttactcctgtcctcaagaacatcatcatcagtttagcaaggctgcctctagtgaacagc
tacacaagagtacctcccttggtctggaaattaggttggtcaccaaaacctgcaggtgac
ttcggcacagtttttcctgaaatcccagtagaatttcttcaagaaaaagaaatctttaag
gagttcatctatcgcattaatacacttggatggatcagccgtactcagtttgaagagact
tgggctactttgcttggtgtgcttgtaactcagcctattgtaatggaccaagaagagaac
cagcaagaggaagatacagagaggacccaaattaatgttcttgcagtacaagccataact
tccttggtgctgagtgcaatgacaatacctgttgcaggcaatccagcagttagctgtttg
gaacagcagccccgcaacaaagctttaaaagctctggacacaaggtttgggagaaaacta
agtgttatcaggggaattgttgaacaggaaatccaagcgatggtatcgaagagagataat
attgctactcatcacttataccaagcttgggaccctgttccatcactttctcctgctact
acaggtgctcttatcagccatgaaaaactcttgctgcagatcaatactgaacgagaaata
ggagacatggattataaactgggacaggtatctatacactccatatggttaggaaataat
atcactccattgagagaagaagagtggggtgaggatgaagaagatgaaaatgacatacct
gctccttcctcaccaccaacctctcctattaataccaggaaacaccgggctggtgtagat
atacattcctgttctcagttcttgcttgaactgtatagtcagtggatcttaccatcaaac
cctagcaagagaacaccggtcattttgattagtgaagtggtgcgatcacttctggcagta
tcagacttatttacagaaaggaatcagtttgagatgatgtatacgacattgacagaattg
cgaaaggtgcatccatcagaagatgagattcttgtacagtatttgataccagccacttgt
aaagctgctgctgttcttggaatggataaagctgtggctgaacctgtaagtcgactcctg
gaatcaaccctaagaagcacccatatgccaagtcggattggagctctgcatgggattctt
tatatccttgagtgtgacttgcttgatgagacagcgaagcagctcattcccattatcagc
gagtatctgctctccaatttgagaggagtcgcacattgtgtgaatatccataaccaacag
cacatcttggtcatgtgtgcagctgctttctatttgattgagaattacccacttgatgta
gggcctgaattctctgcaggaattatacagatgtgtggagtcatggtgtctggaagtgat
gaatcaacaccatccgttatttatcactgtgtcctgaggggattagaacgacttcttctt
tcagagcaactttctaggctggatagtgaatcactggttaaactgagtgttgacagagtg
aatgtgcagagcccccacagagcaatggcagcacttggattaatgctgacttgcatgtat
acaggaaaggaaaaaatcagccccagtcgtaccacagatgcaaatcctactgctcccgac
agtgaatctgtgatcgtagctatggaacgagtatctgtcctttttgataggatcaggaag
ggatttccttttgaagctagagtagtggctcggatccttccacagttccttgatgatttt
ttccccccacaagacgtaatgaataaagttattggagaatttttatccaatcagcagcct
tacccacaattcatggcaacagtagtgtataaggtattccagacactacatagcactgga
cagtcttccatggtccgtgactgggtgatgctgtctctctctaatttcacacaaagaaca
cctgtggcaatggcaatgtggagtctttcctgtttttttgttagtgcttccaccagtcaa
tggatttcagcaattcttccacatattatcagcagaatgggaaaatcagagcaagtggat
gttaacatcttctgtttggtggccatagatttctaccgacatcagatagatgaagaatta
gatcggagggcctttcagtcagtgtttgaggtggtagcatctcctggaaccccgtatcat
cgcttactaagttgtttgcaaaatgtccacaaggtcacagcatgttga
DBGET
integrated database retrieval system
