Tyto alba (Barn owl): 104359782
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Entry
104359782 CDS
T07816
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
tala
Tyto alba (Barn owl)
Pathway
tala04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104359782 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tala00536
]
104359782 (SLIT2)
Glycosaminoglycan binding proteins [BR:
tala00536
]
Heparan sulfate / Heparin
Axon guidance molecules
104359782 (SLIT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
LRRNT
Laminin_G_2
LRR_9
LRRCT
hEGF
LRR_1
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_TGFA-like
EGF_Teneurin
EGF_3
Motif
Other DBs
NCBI-GeneID:
104359782
NCBI-ProteinID:
XP_042663892
LinkDB
All DBs
Position
Unknown
AA seq
1558 aa
AA seq
DB search
MMCGWGKLTLSLGLLLAMAGEVAPQPCPAQCSCSGSTVDCHGLALRGVPRNIPRNTERLD
LNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSEL
LFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLT
LNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSH
LRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTN
LPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYG
NKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS
PLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFR
CSAKEQYFIPGVHHFGCTEDYRSKLNGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHI
PQYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTS
NRLENVRHKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFD
TLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFT
CDDGNDDNSCSPLSRCPAECTCLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPK
ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLS
LHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGE
MADKLLLTTPSKKFTCQEIPGPCGFLIPGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDF
YRCTCPYGFKGQDCDIPIHSCISNPCHHGGTCHLKEGEKDGFWCTCADGFEGENCEVNVD
DCEDNDCENNSTCVDGINNYTCLCPPEYTAANLNEVEKGELCEEKLDFCAPNLNPCQHDS
KCILTPKGYKCDCTPGYVGEHCDIDFDDCQDNKCKNGAQCTDAVNGYTCICPEGYSGLFC
EFSPPMVLPRTSPCDNYECQNGAQCIIKESEPICQCLSGYQGEKCEKLISINFVNKESYL
QIPSAKIRPQTNITLQIATDEDSGILLYKGDKDHIAVELYRGRVRVSYDTGSYPASAIYS
VETINDGNFHIVELLAVDQILSLSIDGGSPKIITNLSKQSTLNFDSPLYVGGMPVKNNIA
ALRQSPGQNGTSFHGCIRNLYINSELQDFRNVPLQVGILPGCEPCHKKVCVHGTCHATSQ
SGFSCECEGGWTGPLCDQQTNDPCLGNKCVHGTCLPINAFSYSCKCLQGHGGVLCDEEEM
LFNPCQSIRCKHGKCRLSGLGKPYCECSSGYTGDSCDKEISCRGERIRDYYQKQQGYAAC
QTTKKVSRLECKGGCSTGQCCGPLRSKRRKYSFECTDGSSFVDEVEKVVKCGCTNCPS
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcggctgggggaagctcaccctgtccctggggctgctgctggcgatggcgggc
gaggtggcgccgcagccgtgcccggcgcagtgctcctgctccgggagcaccgtggactgt
cacgggctggcgctgcgcggcgtcccgaggaacatcccccgcaacaccgagaggctggat
cttaatggaaataacatcacaagaatcaccaagactgactttgctggtctaaggcacctt
cgagttcttcagctcatggagaacaagattagtactattgagaggggagcattccaggat
ttaaaagaactggagaggctgcgcctaaacagaaataacctccagttgctttctgaactg
ctctttctggggacaccgaaattatacaggcttgatcttagtgaaaatcagattcaagca
ataccaaggaaggcattccgaggagcagtagacataaaaaatctgcaactggattacaac
cagatcagctgtattgaagatggggcatttagggctctgcgcgacctggaagtgctcact
ctcaacaataacaacatcactcgactgtctgtggcaagtttcaaccatatgcccaaactc
agaacatttcgtcttcactccaacaacctctactgtgattgccacctggcctggctgtcc
gactggctgcggcagcggccacgggtcggcctctacacccagtgcatggggccatcccac
ctccggggacacaacgtagcagaggtccaaaaacgggagtttgtctgcagtgatgaggaa
gaaggtcaccaatctttcatggccccgtcctgcagtgtcttgcattgccctgctgcatgc
acctgcagtaacaacatcgtggactgtcgtgggaaaggccttactgagatcccaacgaac
cttccagaaaccattactgaaatacggttagaacaaaattcaatcaaggtcatacctcct
ggagctttctcaccatataaaaagcttcgaagaattgacctgagcaataaccagatctct
gaagcagctccagatgctttccagggcttacgttcactcaattcacttgtcctctatggc
aataaaattacagaacttccaaagggcctgtttgaaggactcttttctctgcaattgcta
ttattgaatgccaacaagataaattgcctgcgagttgatgcttttcaagatctgcacaac
ttgaatcttctttctttgtatgacaacaagcttcagaccattgcaaaaggcaccttctca
cccctacgtgcaattcagaccttgcatttggctcagaacccatttatctgtgactgccat
ctgaagtggcttgcggattatcttcatacaaaccccattgagactagtggtgcccgttgc
accagcccccgccgtctggcaaacaaaaggatcggacagatcaaaagcaagaaattccgc
tgctcagctaaagaacagtatttcattccaggagttcaccattttggctgcactgaagat
tacagatccaaattaaatggagactgctttgcagatttggcttgccctgagaaatgtcgc
tgtgaagggaccacagtggactgctccaatcagaaactcaacaaaattcctgatcacatc
ccccagtacacagcagagttgcgactaaataacaatgaattttcagtcctggaagctact
ggaatctttaagaaacttcctcagctgcgtaaaataaacctgagcaataacaagattaca
gatatcgaagaaggagcatttgatggagcctctggtgtgaatgaattgttgctcactagc
aaccgcttagaaaatgttcgacacaaaatgttcaaaggactagaaagtctcaaaacactg
atgctgaggagcaatcgtgtgagctgtgtgggaaatgacagcttcacgggcctgagctca
gtccgcctgctctcgctgtatgacaaccagatcaccaccgtggcacctggctcctttgat
acgctgcattcgctctctacgttaaacctcttggcgaatcccttcaactgcaactgccat
ctcgcttggcttggagactggctaaggaagaaacgcattgtgacggggaaccctcgctgc
caaaaaccctacttcctcaaagagattcccatccaggatgtggcaattcaggattttaca
tgtgatgatggaaatgatgacaatagctgctctccactgtcccgctgtcctgcagaatgt
acttgtctagacacagtagttcgctgcagcaacaaaggcctaaaagctttgcctaaaggc
atcccaaaagatgtaactgaactttatttggatggaaaccagtttacccttgttccaaaa
gagctttccaactacaagcatttaacactcatagatttaagtaacaacagaatcagcact
ctttctaatcagagcttcagcaacatgactcagctgctcaccttaattcttagttacaac
cgcctgaggtgtatccctgcacggacttttgatgggttgaaatcacttaggttgttgtct
ttacatggtaatgatatttctgttgttcctgaaggagcttttaatgatctctcagcattg
tcacacctggctattggagcaaatcctctttattgtgattgtaacatgcagtggctatct
gactgggtaaaatcagaatacaaagaacctggtattgcacgttgtgctggtcctggagaa
atggcagataaacttcttctcacaactccttctaaaaaatttacttgccaagagattcca
gggccttgtggttttctgataccagggcctgtggatgttaatattcttgctaaatgtaac
ccctgtttatcaaatccatgtaaaaatgatggaacttgcaacaatgatccagttgacttc
tatagatgtacttgcccatatggtttcaagggtcaagactgtgatattcccattcattct
tgcattagtaacccatgccaccatggtggaacttgtcacttgaaagaaggagaaaaggat
ggtttctggtgcacttgtgcagatggatttgaaggtgaaaactgtgaagtaaatgtggat
gactgtgaagacaatgactgtgaaaataattctacttgcgtggatggaattaataactat
acttgcctttgtccacctgaatatacagctgctaatctgaatgaagtggaaaaaggtgag
ctctgtgaggagaaactagatttctgtgctccaaacctgaatccttgccagcatgactca
aagtgtatcctgacacccaaaggctacaaatgtgattgcacacctggatatgtaggtgag
cattgtgatattgactttgatgactgccaagacaacaaatgtaaaaatggagcacagtgt
actgatgcagttaatggatatacatgtatttgcccagaaggatacagtggcttgttttgt
gaattttcaccaccaatggttctacctcgtaccagcccttgtgataattatgaatgtcaa
aatggagcccagtgtatcataaaagagagtgaaccaatctgtcagtgtttatcaggctac
cagggtgagaaatgtgaaaagctgattagtataaactttgtcaacaaagaatcctatcta
caaatcccttcagctaagatacgcccccaaaccaatatcactctacagattgccacagat
gaagacagtgggatcctactctacaaaggcgataaagatcatatagcggtagagctgtac
cggggtagagtgagggtcagttatgacacaggatcttacccagcgtctgctatttacagt
gtggaaactattaatgatggcaatttccacattgtggagctgctagctgtggatcagatt
ctgtctttatctattgatggaggaagccccaagataattaccaatttgtccaagcaatcc
acgctgaattttgattctccgctgtatgtaggaggcatgcctgtgaaaaataacatagca
gctttacgccagtctccaggacagaatggcaccagcttccatggttgcattcgtaatctg
tatatcaacagcgagctccaggacttcagaaatgtgccactgcaagtgggaattctgcca
ggttgtgagccttgtcataagaaagtttgtgtgcatggaacatgccatgctaccagccaa
tcaggcttttcctgtgagtgcgaaggaggatggactggacccctctgtgatcaacaaact
aatgacccatgtcttggaaataaatgtgtgcatggtacctgcttgccgatcaatgcattt
tcatacagttgtaaatgcctgcagggacatgggggagtcctctgtgatgaagaggaaatg
ctgtttaacccctgccaatccatcaggtgtaaacatggcaaatgcaggctttcgggactt
gggaaaccgtattgcgaatgcagcagcggatacacgggggacagctgtgataaagaaatc
tcttgtcgaggggaacgaatccgagattactaccaaaagcagcaagggtatgctgcgtgc
cagacgaccaagaaggtatcgagactagaatgtaaaggaggatgttcaaccgggcagtgc
tgtggaccactaaggagcaagagacggaaatactctttcgaatgcactgacgggtcatca
tttgtggacgaggttgaaaaagtggtgaagtgtggctgtacaaattgtccctcctaa
DBGET
integrated database retrieval system
