Tyto alba (Barn owl): 104359925
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Entry
104359925 CDS
T07816
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03030
DNA replication
tala03410
Base excision repair
tala03420
Nucleotide excision repair
tala03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104359925 (RFC1)
03410 Base excision repair
104359925 (RFC1)
03420 Nucleotide excision repair
104359925 (RFC1)
03430 Mismatch repair
104359925 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tala03032
]
104359925 (RFC1)
03400 DNA repair and recombination proteins [BR:
tala03400
]
104359925 (RFC1)
DNA replication proteins [BR:
tala03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104359925 (RFC1)
DNA repair and recombination proteins [BR:
tala03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104359925 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_14
AAA_22
Rad17
BRCT_2
AAA_5
RNA_helicase
AAA_30
AAA_18
RuvB_N
AAA_17
AAA_16
AAA_33
AAA_7
nSTAND3
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
104359925
NCBI-ProteinID:
XP_032854871
LinkDB
All DBs
Position
Unknown
AA seq
1151 aa
AA seq
DB search
MDIRRFFDVVPPGKRKECETVKKSEKIKNGEGPSSGKKRGKETKVNNSPSEDDSKQKRTN
KKRRIIYDSDSEEEVQSVKKSKKPSEKKAATSKLRKVLKQDPVVYISESDEEDDFVNKRI
SLKPKENGTSAISCPGTATVKKEDVKARAKSKPLSPVKQTLTSAADYFGTNSVQRSEKKL
VASKRKEPSQSRDSTLDDEAIARQLQLEEDSELERQLHEDEEFAKTLAMLDETPQKKKAR
KDSEGEQTVLSVKSSPNVMERYKQSEKVKATNSAGEAKNCTAKQQTKSEHSKGSRLSPQS
SDKISRELMDETSPCKPSSKLLSLKQKEEIAEEERGAQSLVSKEKTSSRKEKATPKKEKI
SPKKTESVSPEDSEKKRINYQAYRSFLNREGPKALGSKEIPQGADNCLEGLTFVITGVLE
CIERDEAKSLIERYGGKVTGNVSKKTNYLVVGRDCGQSKCEKASTLGTKVIDEDGLFDLI
RTMPGKKSKYELAAETEAKKVESRPKKTPQKAETGKRNFSPFKKAADNKKYKSTPEKGDT
VKSVKKETAAVRKLMDFKCQTGESQEAPRPKGSLVSGITEDGTERLLWVDKYKPVSLKAI
IGQQGEQSCANKLLRWLRNWHKNTSEDGQAKPNKPGGKDDVTGFKAALLSGPPGVGKTTT
ASLVCKELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGTSSSVSGKHVLIMDE
VDGMAGNEDRGGIQELIGLIRHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRLEQIK
GAMMSVAFKEGLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKSLTYDEAKTDASRAK
KDIKLGPFDVVRKVFASGEEASRMSLIDKSDLFFHDYSLAPLFVQENYVHVKPAAAGGNL
KKHLVLLSRAADSICDGDIVDKQIRSKQNWNLLPTQAIYASVLPGELMRGYMSQFPVFPS
WLGKFSSTGKHDRIVQELAMHMSLRTQVCKRTVNMEYLSYLRDALVQPLKDFGADGVQEA
ITFMDSYCLMKEDVDNIMEISTWGGKPSPFSKLDPKVKSAFTRAYNKEAHLTPYSLNSVK
ASKRQSGSVATLELNEDLNVEDIQSDEDEQDTVESDAMIKQKKVKSSKLPKREKNEETTK
KEGKRKDKTRR
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggatatccggagattcttcgacgttgtacctcctggaaagcgaaaagaatgtgagact
gtgaaaaagagtgaaaaaattaaaaatggcgaaggaccttcaagtgggaagaaaagggga
aaggagactaaggtgaataattcacctagcgaagatgattccaaacaaaagcggacaaac
aagaaaagaagaattatctatgattcagattcagaagaagaggtgcagtcagtgaaaaaa
tccaagaagccatctgagaaaaaagcagctacttcaaaacttcgtaaagttctaaagcag
gaccctgttgtttatatttcagagtcagatgaagaagatgactttgtcaataaaagaatt
tccctgaaaccgaaggagaatgggacatcagcgatcagttgtccaggaacagctacagtg
aaaaaggaagatgtaaaagcgcgagctaaaagcaaaccattatctccagtgaaacagact
ctcacctcagcagctgattactttgggacaaacagtgtacaacgatcagaaaagaaactg
gtagcaagtaaaaggaaagaaccttcacaaagcagagacagcacactggatgatgaggcc
attgctaggcaactacagcttgaagaggattcagagctggagagacagctgcatgaagat
gaagaatttgctaaaactttggcgatgttggatgaaacaccacagaagaaaaaggctcgg
aaagattcagaaggggagcaaacagtattgagcgtcaagagcagtcctaatgtgatggaa
agatataagcagtcagaaaaagtgaaagcaacaaactcagcaggtgaagcaaagaattgc
actgcaaaacagcaaactaaatctgaacattcaaaaggctctcgtttatccccacaatca
tctgataaaatatcaagagagttgatggatgagacctcgccgtgcaaacccagctctaag
cttttgtctctgaaacaaaaagaagagattgctgaagaggaaagaggtgctcaaagttta
gtatcaaaagaaaaaacttcttcaaggaaggagaaggcaacaccaaagaaggagaaaatt
tctcccaagaagactgagtctgtaagtcctgaggactctgaaaagaagagaatcaattat
caagcctaccgaagcttccttaatcgcgagggtccaaaagcactgggatccaaagagata
cctcagggagctgataactgcttggaaggcctgacgttcgtaattacaggcgttctggag
tgtattgaaagagacgaggccaagtctctgattgaacgttacggaggaaaagtaactggc
aatgtcagcaaaaaaacaaactatctggtggtggggcgagactgtggccagtctaaatgt
gaaaaggcatcaactttagggacaaaagttattgatgaggatggcctgtttgatcttatt
cgaactatgccaggcaaaaagtccaaatatgagctggcagctgaaacagaggcaaagaaa
gtggagtcaagacctaaaaagacaccacagaaagctgaaactggaaaaaggaattttagc
cccttcaaaaaggcagctgataataaaaaatataagtctactcctgaaaaaggagacacc
gtcaaatctgtcaagaaagaaaccgctgctgttcgaaagcttatggactttaagtgccag
actggagagagccaggaagccccaagacctaaggggagcttggtttccgggattaccgaa
gatggaacagagagattgctatgggtagataaatacaagcctgtatctcttaaggcaata
attggacagcagggtgagcaaagctgcgccaataaactgctccgatggctcagaaactgg
cacaagaacacctcggaagatggacaagcaaagcccaataaacctggaggcaaagatgat
gttactggttttaaagcagcattactttctggtccacctggagttggtaaaactactaca
gcttccttggtttgtaaggaattggggtatagctatgtggagctgaatgccagtgacacc
cgcagtaagaacagtctaaaggaagtagttgctgaatcacttaacaacaccagcatcaaa
gacttctgttctggcacatcctcatcagttagcgggaaacatgtattgatcatggatgaa
gtggatggtatggcaggcaatgaagacagaggagggattcaggagttgattggtttgatt
agacacacaaagatacccatcatctgtatgtgtaatgatcgaaaccatcctaaaattcgc
tccttggtccactactgttttgatcttcgttttcagagacctcgtctagaacagattaag
ggtgccatgatgtctgttgcatttaaagaagggttaaaaattccaccacctgctatgcaa
gagataatcctggcagcaaaccaggacatcaggcaggttttacataatcttaatatgtgg
tgtgcaaaagataaatcattgacttacgatgaggctaaaacagatgccagcagagccaaa
aaggatatcaaactgggcccttttgatgttgtccggaaggtttttgcttctggagaggag
gcttctcgtatgtctcttatagacaagtcggatcttttcttccatgattattccctagca
cctctgtttgtccaggagaactatgtgcatgtgaaaccagccgctgctggaggaaatctg
aagaagcacttggtgctcttgagtagagcagctgacagtatatgtgatggtgacatagtg
gacaaacagattcgtagcaagcaaaactggaaccttcttccaacacaggctatttatgca
agtgttctccctggggagctgatgagaggttacatgtcccagtttcctgtctttcccagc
tggctggggaaattttcatccacaggcaaacacgatcgtatcgttcaagaactggcaatg
cacatgagtctcaggacccaggtgtgcaagaggacagtaaatatggagtatttgtcgtat
ttgcgggatgcgcttgtccagcccttgaaagactttggagcagatggcgtacaagaagct
ataacatttatggactcttactgcttgatgaaagaagatgttgacaatataatggaaata
agcacatggggaggcaaacccagtccgttttcaaagctggatcccaaggtcaaatcagcc
tttacgcgggcctacaacaaggaggcacatctgactccatattcacttaattcagtcaag
gcatctaaaaggcagtcgggctctgtggcgaccttagaactgaatgaagacttgaatgtg
gaagacatccagtctgatgaggatgagcaagatactgttgaaagtgatgcaatgattaag
caaaaaaaggtgaagtcttccaagctgcccaaaagagagaaaaatgaagaaacaacaaaa
aaagaagggaaaagaaaagataaaacaaggcgttaa
DBGET
integrated database retrieval system
