Tyto alba (Barn owl): 104360021
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Entry
104360021 CDS
T07816
Symbol
CNTN1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
tala
Tyto alba (Barn owl)
Pathway
tala04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104360021 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tala04515
]
104360021 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tala00537
]
104360021 (CNTN1)
Cell adhesion molecules [BR:
tala04515
]
Immunoglobulin superfamily
Contactins
104360021 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tala00537
]
Others
104360021 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
Interfer-bind
Tissue_fac
DUF4998
Fn3-I_PB4
NDNF
Big_3_4
Motif
Other DBs
NCBI-GeneID:
104360021
NCBI-ProteinID:
XP_032855691
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MLVLQGTIHFEIIVEQKITMWLFIYHLITPCFIFCLAEEGNKGYGPVFEEQPIDTIYPEE
SSDGQVSMNCRARAIPFPTYRWKLNNWDIDLTKDRYSMVGGRLVINNPEKSRDAGKYVCV
VSNIFGTVRSSEATLSFGYLDPFPPEERYEVKVREGVGAVLLCEPPYHYPDDLSYRWLLN
EFPVFIALDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPQSDR
AKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPMPATAEISMSGAVLK
IFNIQYEDEGLYECEAENYKGKDKHQARIYVQASPEWVEHINDTEKDIGSDLYWPCVATG
KPIPTIRWLKNGASFRKGELRMQSLSFDDAGMYQCIAENTHGIIYANAELKIVASPPTFE
LNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGSRIRIWDDGSLEIINITK
LDEGHYTCFAENNRGKANSTGVLEMTEATRITLAPLNVDVTVGENATMQCIASHDPTLDL
TFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYMCTAQTIVDNSSASA
DLVVRGPPGPPGGIRVEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAKTEP
SDIEGNMESATVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGG
GGSNRELTITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTNPEIGRYVHKDESMPP
STQYQVKVKAFNNKGDGPFSLTAVIYSAQDAPTEIPTDVSVKVLSSSEMSVSWHHVSDKS
VEGYQIRYWAAHDKEAAAQRVQVSNQEYSTKLENLKPNTRYHVDVSAFNSAGYGPPSRTI
DIITRKAPPSQRPRIISSVRSGSRYIITWDHVKAMSNESAVEGYKVLYRPDGQHEGKLFS
TGKHTIEVPVPSDGEYVVEVRAHSEGGDGEVAQIKISGAAAGVPTLLLVLAVPALGVLAC
SGF
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgttgcaaggcacaattcattttgagataattgttgaacagaagataaccatg
tggctcttcatctatcatcttattacaccctgtttcatcttctgcctggcagaggaagga
aacaaaggttatggacctgtttttgaggaacaacccattgataccatctatccagaagaa
tcttctgatggacaagtttcaatgaactgcagagctcgagcaattccttttcctacttac
aggtggaaactcaacaactgggatattgatttaacaaaggatcgctacagtatggtggga
ggcagacttgttatcaataatccagagaaatcaagggatgctggaaaatatgtctgtgta
gtgtcgaatatctttggaactgtcagaagcagtgaagccactctgagttttggatatctg
gatccctttccacctgaggaacgctatgaggttaaggtgcgagaaggtgttggagcagtg
cttctttgtgagcccccttatcactacccagatgatctcagttatcgctggcttctaaat
gagttcccagtattcattgctttggacaaacgacgatttgtgtcacagacgaatggcaat
ctctacattgcaaatgtagaagcatcagataagggcaattattcgtgttttgtgtccagc
ccttcaataacgaagagtgtattcagtaaatttattccacttattccacagtctgaccgt
gcaaaagtatatcctgctgatatcaaggtgaagttcaaggacacgtatgctctcctgggg
caaaacgttacactcgagtgttttgctcttgggaatccggttcctgaactcagatggagt
aaataccttgaacccatgccagccactgctgagataagcatgtctggtgcagttcttaag
atcttcaatattcagtatgaagatgaaggactttatgagtgtgaagctgaaaactataaa
ggaaaagataaacatcaagcaagaatttatgtacaagcctctcctgagtgggtagaacat
atcaatgacacagagaaggatataggcagcgacctatactggccttgtgtagctacgggc
aagcctattccaacaattaggtggttgaagaatggtgcctcgttccggaaaggtgaacta
agaatgcaaagtctgagctttgacgatgccggcatgtaccaatgtatagcagaaaacacg
catggaattatttatgcaaatgctgaactgaagattgtggcttcacctcctacttttgaa
ctgaatcctatgaagaagaaaatcctagcagctaaagggggccgtgtaatcattgaatgc
aagcctaaagctgctcctaagccaaaattctcatggagcaaaggaacagaattgcttgta
aatgggagccgcatacgtatctgggatgatgggagcctggaaattatcaatatcacaaag
ctggatgaaggtcactatacctgttttgcagaaaataatcgaggaaaagctaatagcact
ggtgttctagaaatgacagaagctacaaggattactttagctccgttgaatgttgatgtc
accgttggagagaatgctaccatgcaatgcattgcatcccatgatcccacattagacctg
acatttatttggtctctaaatggctttgtaatagattttgagaaagagcacgaacattat
gaaaggaatgttatgattaaatccaatggtgagctgctcattaaaaacgttcagctgcgg
catgcggggaggtacatgtgcactgctcagacgattgtggacaactcatcggcttcagct
gaccttgtggtcagaggtcctccagggcctcccggaggtataagggtagaagaaattaga
gacactgctgtagcacttacctggagtcgcggaacagacaatcatagccctatttctaaa
tacactatccagtcaaaaacctttctatctgaagagtggaaagatgccaaaacagaacca
tcagatattgaaggaaatatggaatctgctacagtgattgatttaattccatggatggaa
tatgagttccggataatagcaacaaacactttggggacaggagagcctagtatgccatca
cagagaattagaaccgaaggcgctcctcctaatgtggctccttctgatgttggaggaggc
gggggaagcaatcgagagctgacaataacgtggatgcccttgtcaagagaataccactat
ggcaataactttggttatatagtggctttcaagccatttggtgagaaagaatggagaaga
gttacagttactaatcctgaaattggccggtatgtccacaaggatgaatcaatgccacct
tcaacccagtatcaagtaaaagtgaaagcttttaacaacaaaggagatggaccattcagc
ctcactgctgtcatttattcagcacaagatgctccaactgaaatacctacagatgtgagc
gtaaaagttttatcatcctctgaaatgtctgtttcttggcaccatgtttctgataaatct
gtggaaggatatcagattcgttactgggctgctcatgataaagaagcagctgcacagcgg
gtacaagtcagcaatcaagaatactcaaccaagttggaaaacctgaagcctaatactcgc
taccacgttgatgtttctgccttcaatagtgcaggctatggacctcccagtagaaccatc
gatattattaccaggaaagcacctccaagccaacgtccaagaattatcagttctgtaaga
tctggttcaaggtacatcatcacctgggatcatgtgaaggcaatgtcaaatgagtctgca
gttgaaggatacaaagtactttatagaccagatggacaacatgaaggcaagttattttca
actggaaagcatacaatagaggtcccagtccccagtgatggtgaatatgttgttgaggtc
cgagcacacagtgaaggaggagatggagaagtagctcaaataaaaatttcaggtgccgct
gctggagtaccgactctgctcttggtcctggcggtgcctgccctgggtgtcctcgcctgc
tcgggattctga
DBGET
integrated database retrieval system
