Tyto alba (Barn owl): 104360035
Help
Entry
104360035 CDS
T07816
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
tala
Tyto alba (Barn owl)
Pathway
tala04510
Focal adhesion
tala04512
ECM-receptor interaction
tala04518
Integrin signaling
tala04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104360035 (COL9A1)
04518 Integrin signaling
104360035 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104360035 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104360035 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tala00535
]
104360035 (COL9A1)
Proteoglycans [BR:
tala00535
]
Extracellular matrix (ECM) proteoglycans
Others
104360035 (COL9A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
104360035
NCBI-ProteinID:
XP_042659523
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MKSNWKITAFLYVCSFLWSFISATIQQQSRLPVILGASQRTDLCPTIRIGQDDLPGFDLI
SQFQIEKAASQGVIQRVVGSTSLQVAYKLGPNVDFRIPTSAIYSNGLPDEYSFLTTFRMT
GATLQKYWTIWQIQDSSGKEQVGVNLNGQMKSVEFSYKGVDGSLQTASFLHLPFLFDSQW
HKLMISVEANSVTLFIDCIKIESLNIRPKGKISIDGFAVLGKLKNNPEISVPFEIQWMVI
HCDPLRPQREGCGELPARISQTVIERGLPGPPGPPGPPGPPGVPGIDGIDGERGPNGPPG
PPGPDGDSGKPGSPGLPGEPGADGFTGPDGSRGATGPKGQKGEPGLPGARGLPGKGLLGP
PGPAGAAGLPGEVGRAGPPGDPGKRGPPGPPGPPGPRGTIGLHDGDPLCPNACPPGRPGH
AGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGRSGEVGAQGPPGILGIRGITGIMGPKGT
KGARGLDGEPGPQGLPGAPGDQGQTGPLGEAGPKGERGPQGTRGINGLPGPKGESGLPGV
DGREGIPGMPGAKGELGKPGAPGDAGLQGLPGLPGSPGVKGIPGPKGNRGPPGVPGLMGN
SGKPGQQGPEGEAGPTGPRGPPGSRGEPGPVGPPGLPGKMGPQGDIGLPGLPGPPGLPGG
KGDRGSVGEPGPKGEQGAPGAEGDGGEKGDLGDMGLPGAKGAVGNPGEPGSRGPEGSRGL
PGMEGPRGSPGPRGLQGEQGAPGLPGSQGPAGKEPTDQHIKQVCMRVMQEQLAQLAASLR
RPEFGAPGLPGRPGPPGAPGPAGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEPGERGE
RGFPGRGLKGYPGPRGLPGEPGKPSYGREGRDGARGLTGVAGQPGVPGPPGPPGPPGYCE
PSSCRVQAGQRVDKNMKGP
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaactggaaaataacagctttcttatacgtgtgtagttttctgtggtctttc
atctcagccactatccagcaacaatcaagactaccagtcattctgggtgccagtcagaga
acagatctctgcccaacaatcaggattggccaagatgacttaccaggctttgacctgatt
tctcagttccaaatagaaaaagctgcttcccaaggagtaatccagagagtagtgggctcc
acttctctacaagtggcttataaattgggacccaatgtagacttcagaatcccaaccagt
gccatatattccaacggattgcctgatgaatattcctttctaactacttttcggatgact
ggggccacacttcagaaatactggactatttggcagattcaggattcttcaggaaaagaa
caagttggagtgaatcttaatggtcaaatgaaaagcgttgagttttcttataaaggagtg
gatggaagtctccaaactgcatcatttttgcatttgcctttcttgtttgactcccaatgg
cacaagcttatgataagcgtggaagcaaacagtgtcacactttttattgactgtattaag
atagaatccttaaacataagaccaaaaggaaaaatcagcattgatggctttgcagtgctt
ggaaaacttaaaaataatcctgaaatttcagttccgttcgaaatccagtggatggtgatt
cactgcgacccgctgcgaccccagcgcgaaggctgcggcgagttgccggcccggataagc
cagacggtaatagagagaggtctccctggtccaccaggccccccgggtccaccgggacca
ccaggagttcccggtattgatggcattgatggggagagaggtccaaatggcccccctggt
ccaccgggtccggatggggattcagggaaaccaggatcccctggcttgcctggagagcca
ggagctgatggattcacaggacctgatggctcacgtggagccacaggaccaaaaggacag
aagggtgagccaggactgccaggtgctcgtggacttccaggcaaggggcttcttggacca
cctggtccagctggtgcagcaggacttcctggggaagtaggtcgtgctggtccacctgga
gatccaggaaaaagagggccaccagggccaccaggcccaccaggtcctcggggaacaatt
ggcctgcatgatggtgacccattgtgtcccaatgcttgtccacccggccgcccaggacat
gctggcttaatgggaatgaagggacagaaaggttcgaaaggagagtctggtgaaccagga
aaacaaggttataagggtgaagaaggggaccaaggtcgcagtggtgaagtgggagctcaa
ggccctccaggcatcctaggtatcagaggtataactggtataatgggacctaaaggtacc
aaaggagctcgtgggcttgatggtgagcctggtccccaaggcctccctggtgcacctggg
gatcagggacagacaggtccactgggagaggcaggtccaaagggggaaaggggtcctcaa
ggtacaagaggaataaatggtctccccgggcctaaaggagagtctggcttaccaggagtc
gatggccgggaagggatccctggaatgcctggagcaaaaggtgaactaggaaaacctgga
gctccaggtgatgcagggcttcagggactgccaggtttgccaggctctccaggtgtgaaa
ggcattcctggcccaaagggtaatagaggtccccctggggtgccaggtttgatgggaaat
tctggtaaaccgggtcaacaggggccagagggagaagcaggtccaacaggaccccgggga
ccaccaggtagcagaggggagccaggtcctgtgggtcctccaggtttaccagggaaaatg
ggtccacagggtgatattggacttcctggactgccaggtcctccaggcctacctggtggt
aagggtgaccggggttctgtgggtgaaccaggacctaagggtgagcaaggtgcacctgga
gcagaaggagatggaggagaaaagggtgacttaggtgatatgggattaccaggagcaaag
ggagctgttggtaatcctggagagcctggttcccgtgggcctgagggaagtcggggtctg
cctggcatggaagggccacgaggctcacctggcccgcgaggcttgcagggtgaacagggt
gccccaggtctgcctggcagccaaggtccagcgggaaaagaaccaactgatcaacacatt
aagcaggtttgcatgagagtcatgcaagaacaactagctcagctggcagccagtctcagg
aggccagaattcggtgccccaggtctgcctggccgaccgggaccaccaggtgccccaggg
cctgctggcgaaaatggcttccctggacagcttgggccccgcggcttgcctggccttaaa
ggcccccccggtgagatcggtcgcaaaggtcctaaaggtgaaccaggagaaagaggagaa
agaggatttccaggcagaggactgaaaggttaccctggaccaagaggtcttccaggtgaa
ccaggcaaacccagctacggcagggaaggccgtgatggtgcacgaggtctcactggggtg
gccggtcagcctggggttcctggtcctcctggccctcctggccctcctgggtactgcgag
ccgtcatcttgcagagtgcaggctggacagagagttgataagaacatgaaagggccatga
DBGET
integrated database retrieval system
