Tyto alba (Barn owl): 104360477
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Entry
104360477 CDS
T07816
Symbol
DDX43
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
tala
Tyto alba (Barn owl)
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tala03041
]
104360477 (DDX43)
Enzymes [BR:
tala01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104360477 (DDX43)
Spliceosome [BR:
tala03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104360477 (DDX43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH_2
Motif
Other DBs
NCBI-GeneID:
104360477
NCBI-ProteinID:
XP_042659244
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MSDWEASSDEHVGAAGRPASAAGRLGRPVATPSRSRASAEGGGGRSGAQWRQEAAVSLGE
EERPPRGAEGSRGPPGAARQRPPRAATSQAWDAVEPLCFQLDSALVGALIGRGGSKIREL
EDSSGSRIKVIKGTCEAEVKIFGSIAVQNKAKMLIDDAVTKCRQNCIRGGTERGKTSDII
QPENNPKKPVIDWASLRENRAKYEAMKWADLPPIEKNFYKELSQTASMSQEEVELWRKEN
NNIICDDLKEGEKRCIPNPVCKFEDVFEHYPDIMANIRKVGFQKPTPIQSQAWPIILQGI
DLIGIAQTGSGKTLAYLMPGFIHLTSQPISKDQRGGPGMLVLAPTRELALQVEAECSKYA
YKGIKSICVYGGGDRKGQIDVVTKGVDIVIATPGRLNDLQMNNFINLKSITYLVLDEADR
MLDIGFEPQIMKILIDVRPDRQTVMTSATWPDGVRRLAKSYLKNPMIVYVGTLDLAAVNT
VEQRVVVLAEEEKRAFMQYFIDSMKPKDKVIIFVGKKFTTIVLFNPRADDLASDFGLQGI
PVQSLHGNREQCDREQALDDFKKGKVRILVATDLASRGLDVHDITHVFNFDFPRNIEEYV
HRIGRTGRAGRTGEAVTLVTKNDWRVASELIEILERANQVRIRLTGXDSXWFWVVPNELI
AMAERYKQFQNRKEIEKVIRRPQRKPPK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactgggaggcgagcagcgacgaacatgtcggcgcggcgggccggccggcgtct
gctgccgggcgcctgggccggccagtggcgaccccttcgcggagccgcgcctcggcggag
ggcggcgggggacggagcggtgcccagtggcggcaggaggcggcagtcagcctcggagag
gaggagcggccgcctcgaggtgccgaaggctcccgcggcccaccgggggcagcgaggcag
cggccgccgagggctgccaccagccaagcttgggatgctgtggagcccctctgcttccaa
cttgatagcgctctggtcggggctcttataggtcggggtggaagtaaaataagagaactt
gaggattcttcgggttccaggataaaggtcataaagggaacctgtgaagctgaagtaaag
atttttggcagcattgctgtgcaaaacaaagccaagatgttgattgatgatgctgttaca
aaatgtagacaaaactgcattagaggtgggactgagagaggaaaaacttcggacattatc
cagcctgaaaataacccaaagaaaccggtgattgactgggcttctcttcgagaaaacaga
gctaaatatgaagctatgaagtgggcagacttgcctccaattgagaaaaacttctataaa
gaattgtcccagactgcatcaatgtcacaagaagaagtggaactgtggcggaaagaaaat
aataacataatttgtgatgacttaaaagaaggtgaaaagcgctgcattcccaatcctgtt
tgtaaatttgaagatgtatttgagcattatcccgatatcatggctaatataagaaaagtt
ggttttcaaaagcctacaccaattcagtcccaggcatggccgatcatactccaaggaatt
gatcttattggtatagcacagactggttccgggaagacgttagcgtacttaatgcctgga
ttcattcacttgacttcacaaccaatatccaaagatcagcgtgggggcccaggaatgtta
gtccttgctcccactcgagaactggcacttcaggtagaggcagagtgttcgaagtacgca
tacaaaggaattaaaagtatttgtgtatatggtggtggggaccgaaaaggacagatagac
gtggttaccaaaggtgtggatattgttattgctactcctggcagactgaatgatcttcag
atgaacaacttcataaatttgaagagcataacatacttggttttagatgaggctgacaga
atgttggatataggttttgaacctcagataatgaagatcctaatagatgtgcggcctgac
agacaaactgttatgacaagtgctacttggcctgatggtgttcgtcgcctagcaaaatcc
tatttgaaaaatcctatgattgtatatgttggcactcttgacttagcagcagtaaataca
gtagaacagagagttgttgttcttgctgaggaggaaaagagagctttcatgcagtacttc
attgactctatgaagccaaaagataaggtcatcatttttgtgggaaaaaaatttacaacc
attgttttatttaatcctagagctgatgatttagcaagcgactttggtctccaaggaatt
ccagtacagtcacttcatggtaacagggaacagtgtgatcgagaacaggctttagatgac
ttcaagaaaggcaaagtcagaatactggtagctactgacttagcatcccgtggccttgat
gtgcatgatattactcatgtttttaactttgacttccctcgcaatattgaagaatatgtt
catagaataggtcgtactggaagagcaggacgtactggggaggcagtaacgcttgtcact
aagaatgattggagggttgcatctgagctgattgaaattctcgaaagagcaaaccaagta
agaatacgtcttactgggtaagattcataatggttctgggtagttcctaacgagcttatt
gcaatggcagaaagatacaaacaatttcaaaacagaaaagaaattgaaaaggttatacga
agacctcagagaaagcccccaaaataa
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