Tyto alba (Barn owl): 104360719
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Entry
104360719 CDS
T07816
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104360719 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tala03041
]
104360719 (CDC40)
Spliceosome [BR:
tala03041
]
Complex C
Other components
Step II factors
104360719 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
104360719
NCBI-ProteinID:
XP_042658826
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MSAAIAALASYGGSDSEPDSEPEAEGGSQHDAVLASRDAVLHLRAPPAATPALAVDAAPE
VAVKEDVETGVHLDPAIKEVQYNPTYDTMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAH
INDFMFEQQRRTFATYGYALDPSIDNPEVATKYIGSVEEAEKNQGLTVFETGQRKIEKRK
KFKENDASNIDGFLGPWAKYIDEKEVAKPSEEEQKELDEITAKRQKRGKLEDDKPGEEKT
ILHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPL
SGHILLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNNAGTRFLSAAYDRYLKLW
DTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLG
AVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQ
SMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKT
TKLYSRLKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggctatcgccgcgctcgcctcctacggcggctccgactcagagcccgactcg
gaacccgaggctgagggcggctcccagcacgacgccgtgctcgccagccgcgacgccgtg
ctgcacctccgggcgccgcccgcagcgaccccggctttggccgtcgacgcggccccggaa
gtagccgtaaaggaagatgtggaaacaggagtccaccttgatcctgctatcaaggaagtt
caatacaatcccacttatgataccatgtttgcacctgagtttggaccagaaaacccattt
aggactcaacaaatggctgcacctagaaatatgctttctggatatgccgaaccagctcac
atcaatgattttatgtttgaacaacaaagaagaacatttgcaacctatggttatgcatta
gatccttctatagataaccctgaagttgctaccaaatatattggttctgtagaagaagct
gaaaaaaaccaaggtttaacagtgtttgaaacaggacaaaggaaaattgaaaaaaggaag
aaattcaaggagaatgatgcatctaatattgatggttttctgggaccatgggcaaagtat
attgatgaaaaagaagtagccaaaccatcagaagaagaacagaaagagttggatgaaata
acagctaagaggcagaagagaggaaaactagaagatgataaacctggagaggagaagact
atattacatgttaaggaaatgtatgactatcaggggagatcgtatcttcatgtccctcaa
gatgttggagttaacctccgttctacagtgccacctgagaagtgctatcttccaaagaaa
caaatccatgtgtggtctggacatacaaagggtgtcagtgcagttagattgtttcctcta
tctgggcatatactgttgtcttgctctatggattgcaaaattaagctatgggaagtatat
ggtgatcgaagatgtctacgaacattcattggacatagtaaagctgttcgagacatctgt
tttaataatgctggcactcgatttcttagtgctgcatatgaccgctatcttaaactctgg
gacactgaaacagggcaatgtatttcaagatttacaaacaggaaggttccttattgtgtc
aagttcaatcctgacgaagataaacaaaatctctttgttgcaggaatgtcagataagaag
attgtgcagtgggatattcgaagtggtgagattgtgcaggaatatgataggcatttggga
gctgtcaacaccattgtgtttgtggatgaaaatagaaggtttgtgagtacatccgatgac
aagagtttaagagtctgggaatgggacattcctgtagacttcaagtacatagctgagcca
agtatgcattcgatgccagccgtgactttgtctccaaatgggaaatggttggcttgccag
tcgatggataaccaaattctgatttttggagctcagaacagattcagattaaacaaaaag
aaaattttcaaaggtcacatggtagctggctacgcttgtcaagtggatttttcacctgac
atgagctacgtgatatctggagatgcagatggaaaacttaacatctgggactggaagaca
acaaaactctacagcagattaaaagcacatgataaagtctgtatcggtgcagtgtggcat
ccacacgaaacatcaaaagtcattacatgcggctgggatggtcttattaaactgtgggac
taa
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integrated database retrieval system
