Tyto alba (Barn owl): 104360835
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Entry
104360835 CDS
T07816
Symbol
SHOC1
Name
(RefSeq) LOW QUALITY PROTEIN: protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
tala
Tyto alba (Barn owl)
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tala03036
]
104360835 (SHOC1)
Chromosome and associated proteins [BR:
tala03036
]
Eukaryotic type
Meiosis-specific proteins
Others
104360835 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
104360835
NCBI-ProteinID:
XP_032857446
LinkDB
All DBs
Position
Unknown
AA seq
1448 aa
AA seq
DB search
MFAALKYHSMDYLYESMARQKFSIWRLSLCFPPCLHQDEKYHLTGLFADDKYRKPWTRIT
STQNMITISVLDQWKNSLSVEDFLEKKPVSSVEFYIGNGLIEVIPSSNPCSQTNTEEPLL
WKNVFKEKSTQEKYLKIDYATEFKEEWQDLCIEEELVFTDNLENFRKKLPTSSVLLSRLH
FFLVKDPLSDSEGRNLTEENFFRECLTFQNEMVMEETKKELQGIKENFCTISVKDEEYFM
LPVALEFCKPSNGRSDSVKIPSYLELKELLNLSPETMAVEEIYKEMIKEDLKAEITYKIE
ISKYCPMPQEVCSGNARSMLECCEPAKCVPYLKDKMEVPLTPPCRQERSWVNFLCTGLQE
EPILPSGNSILTTERSREYLEYFVWQSEKYRDNMSSLLFVEHQTVKLAYQPYSLAELKEM
LQVGVEAPMPSSLEEGWWLHLGLNPVSIETLEQLNMDASNANSLLPTEVETFTQITSYQL
ERWLEEKNSVTNQELLSAERHQSDKVINLYMSPHTQRQYFTLDMSYASSAKIHSTDTSVE
ELTEGSIKKNKVEEAIYFLNEEKKTPKSSEPVSCKGVSSKQDNSSSSQKPASSACATNCD
NDDFDLSNFIMLRSKHTFTQREEKNDIDRPEKVLEPEEQNMHVTKEDSSVCEAVRMSEKE
QENEDRVTVDIQASESQCQAYCLLREAANPVLKDLIHLGVLASVSWNFERVKFDHTRFFL
KQQEKMICDHFEEGKIDEKEIMLFRHAALVHLLVTVRDLLLTCGLDTALGYLSKTKDIYK
NILESCLNNVWRQLNIVQYSSQKNHETNPKITELQCQMLSWMQSYGEEHTVKILIITRMD
SEREKSALIYTLSRVEGLKVMDLNSEKKGTFLGCKDIISSLSRYSCVIVHNQQIGADFPW
THFSLVIEYDYSENSCWKNLCKNLNVTYMTFKTTLPETIQMGNHCSSFLLEVQIPYVFLT
TEGLLNMPDMLQLLESKYSITFVERSSSYSLRLFGSTERYVVLTIDECTAIFLQSMEELN
YEKSCDNVISKLMALSLQYTCCWIVFYSRERLNLEYSLRGDTLLNLVLIYATLIELTQMS
EDFEVKVVLMPGIEETVLIIRQIADNILIASNISPHEWLDKSWLSVLSSETEKCLLTFPC
INPLVAQFMLKKGSSLDRLFLASFDQLQELLPEVPKKVLKHFSDVTSSYSLNPAAPLEAA
VKGASPSENWNNFNTFYPDYKQSHQSLEMPRTSHINSEAIIPPLNHHHRFFXDLPGCKQK
KSCSPEEIAGRRQNFCAVPKDREDFAHLDVMNSLCIQKQPFRMHHSSDNSSKNSEKEDFF
ATFSDNTTEESSKSFLEEFRDTTFKKPEILTDQNPWYDSLSTGPCDSFSSDGFRSDFFVD
PDELQSLNFHQIGRESKGKRKQGPPLLQMKLKNRTDSGFAEVLEFKKRRLTYEKVPGRSD
GQTRLKFF
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagctttaaagtatcactcaatggactatttatatgagagcatggcaaggcag
aagttttccatctggagattatcactttgctttcctccctgtttacatcaggatgaaaag
tatcatctcactggactctttgctgatgataagtataggaagccatggactagaattact
tcaacgcagaacatgattactatttcagtattggatcaatggaagaatagtttgtctgtg
gaggatttcctggaaaagaaacctgtctcctctgtagagttctatattggtaatggttta
atagaagtcattccaagttcaaatccctgctctcagactaacacagaagaacctttactt
tggaagaatgtttttaaggaaaaatccactcaggaaaaatatttgaagattgactatgcc
actgaatttaaagaagaatggcaagatttatgtattgaagaagaacttgtttttactgac
aatcttgaaaattttcgtaaaaagctgcctacttcatctgtacttctgagcaggctacat
ttttttttagtgaaagatcccctttcagattctgaaggacggaatttaacagaagagaac
tttttcagggaatgtttgactttccaaaatgaaatggtgatggaagagactaaaaaagaa
ttgcaggggattaaagagaacttctgtaccatttctgtaaaagatgaagagtatttcatg
ttacctgttgcgttagaattctgcaaacccagcaatggcagatcagattctgttaagatt
ccatcatacttggaactgaaagagttgttaaatttatctcctgaaactatggctgttgaa
gagatatacaaagagatgatcaaagaagatctcaaagcagaaattacatacaaaatagaa
atttccaagtactgccccatgcctcaagaggtttgctccggtaatgccagaagtatgttg
gagtgctgtgagccagctaaatgtgttccatatctgaaagacaaaatggaagtaccttta
actcctccatgcagacaagaaagatcatgggttaattttctgtgcacaggacttcaagaa
gagcctattcttccttctggtaacagtattttgactacagagcgctctagggaataccta
gaatatttcgtatggcaatcagagaagtatcgggataatatgagctctcttttgtttgtt
gagcatcagactgttaaacttgcatatcagccttattcgcttgcagaactgaaggaaatg
ctgcaagttggggtagaagcaccaatgcctagctcactagaggagggctggtggcttcat
ttgggtttaaatccagtctccatagaaactttggagcaattaaatatggatgccagtaat
gcaaacagtttgcttcctacagaagtagaaacattcacacagattacatcatatcagtta
gaaaggtggcttgaagaaaagaattctgtgacaaaccaggagctgctctctgctgaaagg
catcagtcagacaaagtaattaatctttatatgtcgccacatactcaaaggcagtacttt
accctggatatgagttatgcatcatctgccaaaattcacagtacagatacgtctgtggaa
gagcttactgaaggaagcataaaaaagaataaggtagaagaggcaatttatttcttaaat
gaagaaaagaaaacccccaaatcatctgaaccagtcagctgtaaaggtgtgtcttctaaa
caagacaactcatctagtagtcaaaagcctgcatcatctgcttgtgctacaaattgtgac
aatgatgattttgatctgagcaactttatcatgctgagatctaaacatacattcacccaa
agagaggaaaaaaacgatatagatagacctgaaaaagtgctggaacctgaagaacagaat
atgcatgttaccaaagaggacagttctgtttgtgaggctgtaagaatgagtgaaaaagaa
caagagaatgaggacagagtcacagtcgatattcaagcatcagaaagtcaatgccaggca
tactgcctcttgagagaagcagccaatcctgttctaaaagatttgatacatttgggtgta
cttgcctctgtaagttggaactttgagagagtgaaatttgatcacacaaggtttttctta
aaacagcaagagaaaatgatatgtgatcactttgaagaaggtaaaatagatgagaaggag
atcatgctgtttagacatgctgctctggtgcacctgctcgtgacagttcgagatcttcta
ttaacatgtggcttggacacagcactaggttatttgtccaagacaaaggatatctataaa
aacatcttagaatcctgtttgaataacgtctggaggcagctgaacattgtacagtacagc
agccagaaaaaccatgaaacaaatcccaaaataacagagcttcagtgtcaaatgttaagt
tggatgcaaagttatggagaggaacacactgttaagatactaatcataacgaggatggac
tcagagagagaaaaatctgccctcatttacactttgtctagagtagaaggcttaaaagtt
atggatttgaattctgagaaaaaaggaacctttttaggttgtaaagatatcataagcagt
cttagtagatattcctgtgttattgtacataatcagcaaattggagctgacttcccttgg
acacacttctcgttagtgattgaatatgattattctgaaaactcttgctggaaaaatctg
tgcaaaaatctgaatgttacctacatgacttttaaaaccaccctcccggaaacaatacaa
atgggcaatcactgcagttcctttctcctggaggtacagattccatatgtatttctgaca
actgaaggtcttcttaatatgccagatatgctacagcttttagaatccaagtacagcatt
acctttgttgaaagaagcagtagttactccttaaggctctttggaagcacagaacgatat
gttgtattgacaatagatgaatgtactgctatctttttgcagagtatggaagaattaaat
tatgagaaatcctgtgacaatgtaatatcaaagctgatggcattatcactccaatatacg
tgctgttggattgttttctattcgagagaaaggctgaatttagagtacagtctcagggga
gatactctgcttaaccttgtcttaatttatgccactctaattgaacttacacagatgtca
gaagactttgaagtgaaggtagttcttatgccagggattgaagaaacagtactgataatt
cgtcagattgctgacaacattttgatagcatctaatatcagtcctcatgagtggttggac
aaatcctggctttctgtcttgtcatctgagacagagaaatgcctgcttacttttccatgt
atcaaccctctggttgcccagtttatgttaaagaagggatcttcgctggacaggttgttt
cttgcaagctttgatcaacttcaggaacttctgccagaggttccaaaaaaagttttaaag
cattttagtgacgtgacatcttcatatagcctaaatcctgctgctccactagaagcagca
gtgaaaggtgcatcaccctcagaaaactggaataacttcaacacattctatccagattat
aaacaaagtcaccagtctttagaaatgccaagaacatctcatataaattctgaagccata
attcctccattgaatcatcatcacaggttttttnttgatcttccaggctgtaagcaaaag
aaatcatgttctccagaagaaattgcagggaggaggcagaacttctgtgctgtgccaaag
gaccgtgaagattttgctcatctagatgttatgaattctctttgtattcaaaaacagcct
ttcaggatgcaccatagctctgataattcttccaaaaactctgaaaaagaggatttcttt
gcaactttcagtgacaatacaactgaggagagctctaagagttttctcgaagaatttaga
gacacaacgtttaagaagccagaaatcctgactgaccagaacccgtggtatgactcttta
tccacaggcccatgtgattcattttcatctgatggttttcgctctgatttctttgttgac
ccagatgagcttcaaagtctgaattttcaccaaataggtagagaatctaaaggaaagaga
aaacaaggtccaccattattacagatgaaattaaaaaatagaacagattcaggatttgca
gaagtactagagttcaaaaagaggagattgacatatgaaaaagtccctggaagaagtgat
ggacaaacacgtcttaaattcttttga
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