Tyto alba (Barn owl): 104360857
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Entry
104360857 CDS
T07816
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
tala
Tyto alba (Barn owl)
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tala03016
]
104360857 (TRMT13)
Enzymes [BR:
tala01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
104360857 (TRMT13)
Transfer RNA biogenesis [BR:
tala03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104360857 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
DUF7077
Motif
Other DBs
NCBI-GeneID:
104360857
NCBI-ProteinID:
XP_009965186
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MAAPESGRGCPVPGRCAYFVERKKRFCKMVPAPGRRFCGEHGQQEEENNRKRIPCPLDPK
HTVYEDQLQKHLKKCNSREKPKPVYFVQDINAGSKDVAEILEKTVPVSCLSKEELENLII
KLKKASNGLELPLKEQILSHQALEEALNDPKNGESAFKHLKQQASILGNMENLHLLGPGR
CFVEFGAGRGKLSHWVDVALQNVENVQFLLVERATTRFKVDGKHKRKESIFERLQVDIQH
LCLNKVPVLKKNKLPVVGMGKHLCGAATDLALRCLVESYTACCDGENEGPAPKRLKTDKT
EEASNSFADNEGNEEDCKPVAGIVIALCCHHKCDWTHYVGREFFKSVGLGPVEFHYFQRM
SSWATCGMRETTTKAPTSEESEDQTNDTEEHEQTCSKIESGSDTLQGILTVEERKEIGCL
CKLLIDHGRIEYLQQRGYKAELQYYTESAVSLENVLLTAVPSPSLIPEPTT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgagtcgggcagaggctgtccggtgccgggacggtgtgcctacttcgtg
gagaggaagaagcgcttctgcaagatggtcccggctcctgggaggcgcttttgtggagag
catgggcagcaggaggaagaaaataacagaaaaagaattccatgccctcttgatccaaaa
cacaccgtatatgaagaccaactacaaaagcatttaaaaaaatgtaattcgagagagaag
ccaaagccagtctactttgttcaagatattaatgcaggttcaaaagatgtagcagaaata
ctggaaaaaacagtacctgtctcttgtctatccaaagaagagttggagaacttaattatt
aagttgaaaaaagcaagtaatggactggaacttccccttaaggaacaaatactgtcccac
caggctttagaagaagccttaaatgacccaaagaatggggaatccgctttcaaacacttg
aaacaacaggcttctattttaggtaacatggaaaatttacatttacttggtccaggaaga
tgttttgttgagtttggagctgggcgaggaaagctgtctcactgggttgatgttgcctta
cagaatgttgaaaatgttcagtttttgcttgtggaaagggccactacaagattcaaggtg
gatggaaaacataaaaggaaggagtctatatttgaaaggcttcaagttgatattcaacat
ttatgtttaaacaaggtacctgttttgaagaaaaataaactaccagtggtaggaatgggg
aagcatttgtgtggtgctgcgacagatcttgctttgagatgcttggttgaaagttacaca
gcttgctgtgatggagaaaatgaagggcctgcaccaaaacgccttaagactgataagaca
gaggaggcttctaacagttttgctgataatgaaggcaatgaagaagactgtaagcctgta
gctggaattgttattgcactgtgttgccatcacaagtgtgactggacacattatgtaggc
agagagttctttaaatcagtaggacttggaccagtagaatttcattattttcagagaatg
agtagctgggccacttgtggcatgcgagaaaccacaactaaagcccctacaagtgaagaa
agtgaagatcaaactaacgacacagaagaacatgagcaaacatgcagcaagatagagagt
ggttctgatactttacaagggatacttactgttgaagaacgaaaggagataggttgcctc
tgtaaactgttgattgaccatggacggattgaatatttacaacaacgaggatacaaggct
gaattacagtattatacagagtctgctgtgtccttggagaatgtcttgttgacagctgtc
ccaagtccatctctgataccagagccaactacttga
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