Tyto alba (Barn owl): 104361120
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Entry
104361120 CDS
T07816
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104361120 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tala03019
]
104361120 (HBS1L)
Messenger RNA biogenesis [BR:
tala03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104361120 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
104361120
NCBI-ProteinID:
XP_042651716
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATCAQPLEEEYG
NEGTDDTADYFTSNHQLTDIDRARLNSCLDQMREVLAESVPEQTMVQAILDSKFDAQKAL
DLVLSQGSKQNVKNEDAVIVGKTTKGKTRDSHSARMESEIVPKITKMTVSGKKQSMGFEV
PCVIAEENGHANTPQKGLLTEDASVASGVLEAVSKSILSPQVAQVSEEQNMMPAPVKKSS
KTKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQES
KKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKIITLMDAPGHKDFIPNMITGA
AQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQ
EITSKLGQFLKQAGFKESDVAYIPTSGLGGDNLVTRGQSGDLTQWYKGKCLLEQIDSFKP
PQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGDRLLAMPPHETCTAKGITLHDE
PVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARVLIFNIEVPITKGFP
VLLHYQTVSEPATIKRLLSVLHKSTGEVTKKKPKFLTKGQNALIELQTQRPVALELYKDF
KELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcaccggaacgtccgaggctataactacgatgaagattttgaagatgatgat
gtatatggccaatcagtagaagatgattattgcatttctccgtcaacagcagctcagttt
atctactccagacgagacaagccagcaacatgtgctcagccattagaagaagaatatggc
aatgaaggtacagatgatactgctgattatttcacatccaatcatcagttgactgatatt
gatagagcccgtcttaattcatgccttgatcaaatgagagaagttttggcagagtctgta
ccagagcaaacaatggtgcaagcaatactggatagtaaatttgatgcacagaaggctttg
gatcttgtgctttcacaaggcagtaagcaaaatgtgaagaatgaggatgctgtgattgta
ggaaagacgacaaaaggaaaaacaagggattcccactcagccagaatggaatctgaaatt
gtgccaaaaattaccaaaatgacagtgtctggaaagaagcaatctatgggatttgaagtt
ccatgtgtgattgctgaagaaaatggccatgctaacacacctcagaaaggactgttaact
gaagacgccagtgtagcttctggggtacttgaggcagtttcaaaatctattctttcaccc
caagtagcgcaggtttcagaagagcagaatatgatgcctgctccagtaaaaaagtcaagc
aagacaaaaccacaaatagatgtgaaagcagagttggagaagagacaaggaggaaagcag
ctgcttaatttggtggtaataggacatgttgatgcaggtaaaagtactttaatgggtcat
ctgctctaccttttgggaaatgtgaacaaaagaactatgcacaaatatgaacaggaatct
aagaaggctggcaaagcttcatttgcctatgcatgggtcttggatgaaaccggtgaagaa
agagaaaggggagtgacaatggatgtgggtatgaccaaatttgagacaaagactaaaata
attaccttgatggatgctccaggccacaaagacttcattccgaatatgatcacaggagct
gcacaggctgatgtggctattttggttgtggatgctagcagaggagagtttgaagcaggg
tttgagacaggtggacaaactagagaacatggattattagtgcgctctcttggagtgaca
cagctagctgttgcagtcaataaaatggaccaggtcaattggcaacaggaaagatttcag
gaaattacaagtaagctcggccaatttcttaaacaagctggctttaaggaatcagatgtg
gcttatatcccaacgagtggcctcggtggtgacaatctggtcacaaggggtcagtcaggt
gacctcacacagtggtataaagggaagtgtttgttagagcaaatcgattctttcaagccg
ccgcagagatcagtggacaaaccatttaggttgtgtgttgccgatgtttttaaagaccaa
ggatcgggattttgtgtgactggtaaaatagaagcaggctatattcaagttggagaccga
cttctggcaatgcctccccatgaaacttgcactgcaaaaggaatcacactgcacgatgaa
ccagttgattgggctgcagcgggagatcacgttagtctcactttgaccggcatggatatc
atcaaaatcaatgttggttgtgtattttgtgatcccaaggaacccattaaagtttgcact
cgtttcagagctcgggttctcatcttcaatattgaggttccaatcactaaaggatttcct
gtgctcttacactatcaaaccgtaagtgaacctgctactattaaaagactgttgagtgtc
ctgcacaaaagcactggtgaagtgacaaagaaaaaacctaagttcttgactaaaggacag
aatgctctaatagaactgcaaactcaaagacctgttgctctagagttgtataaagatttt
aaagagcttgggaggtttatgttacgctacagtggttccactattgctgcaggagttgtc
acagagattaaagaatga
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