Tyto alba (Barn owl): 104362194 Help Entry 104362194         CDS       T07816                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism tala  Tyto alba (Barn owl) Pathway tala04382   Cornified envelope formation tala04510   Focal adhesion tala04512   ECM-receptor interaction tala04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tala00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104362194 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     104362194 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104362194 (COL4A1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     104362194 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:tala04147]     104362194 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:tala00536]     104362194 (COL4A1) Exosome [BR:tala04147]  Exosomal proteins   Exosomal proteins of other cancer cells    104362194 (COL4A1) Glycosaminoglycan binding proteins [BR:tala00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104362194 (COL4A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  104362194 NCBI-ProteinID:  XP_042661912 LinkDB All DBs Position Unknown AA seq 1669 aa AA seqDB search MRLCLGFGLLLSAGLSAVSAAGCSGCGKCDCSGVKGQKGERGLPGLQGVIGFPGMQGPEG PPGPPGLKGDTGEPGLPGTKGTRGPPGTSGFPGNPGLPGIPGQDGPPGPPGIPGCNGTKG ERGPVGPPGLPGLSGSIGPPGPPGMKGDPGEVIGLLPPSVLKGDKGFPGQPGLPGPPGTP GFQGPMGPQGPPGDPGPPGPPGLPGEKGYMGLGFQGPKGEKGEQGVRGPPGPPGPAPHMK EKGSEVIKGEKGDPGEKGEQGAPGLPGSGFRGEKGEPGKPGPRGKPGKDGEPGPKGEAGL PGGFGIPGRPGEPGAKGDKGERGFPGPPGRLIDPGPIDTFGEKGEPGVSGLPGLKGQKGE KGFPGIQGIPGPPGRPLPDRVGSPGVPGERGEKGEKGSPGFPLPGPPGRDGFPGPPGLPG PPGPPGKTDGIDQCQQGEPGAPGSPGLPGRDGFPGEMGEKGDKGESCVLCDKVGPPGLPG PQGPPGPAGFPGQSGLKGDRGLPGLDGLPGVPGPPGTPGLMGSPGAKGEPGDFSYDSILK GEKGDPGFPGQPGTPGREGRPGKDGLPGPQGPKGASGTAGLKGERGPPGQPGFPGVRGER GFPGPPGIGAAGLPGDKGDRGFAGTPGLPGLPGAKGEAGRSVPLPGPPGADGLPGPPGFP GPQGDKGNPGLPGRPGLPGEKGAVGQPGIGFPGPPGPKGFQGQPGSPGLPGTPGTPGLDG LPGVPGLQGQKGEPGVGLPGPKGLPGPPGPAGIPGEKGNPGLPGLRGEQGFPGIPGQQGF RGDPGLPGLQGLQGPPGAPGLGPQGSPGPAGQPGLQGPPGLPGIKGERGFPGIPGLDMPG PKGDKGSQGQPGVPGSVGLPGLPGPQGAVGLKGSAGAKGEMGVMGTPGLPGTPGPVGDRG LPGEKGSQGFKGVVGPQGDPGVKGDKGEAGLPGKPGTMDTMDMVSLKGQKGDQGEKGDHG ATGEKGLRGEYGDPGIPGKDGEPGTPGHPGPKGDQGPPGYPGDPGIPGQKGSVGEMGLPG TPGEKGLPGVPGSPGTPGFPGQKGEKGDKGAPGFPGIGFPGSPGEKGEPGRTGSPGISGD KGEKGSAGIPGMPGSPGPKGSPGMAGFPGSPGRHGEKGEKGLPGLSGIPGLKGEQGEPGV PGPAGSIGQKGEPGYDGIPGAAGAKGEQGVPGRGLPGFPGAKGDKGAKGEVGFPGSPGSP GIPGLKGEPGFDGPPGPKGSQGLPGLPGSAIEGPKGDRGPQGQPGLPGLPGPTGPPGPPG LKGAKGDQGSNGWPGTPGSPGVKGDPGFQGLPGSPGLPGDTGQKGDLGPPGVPGVPGPKG SPGFPGLKGEQGEQGLPGSKGLQGPPGPPGAFQLVKGDPGLPGPVGPVGLKGFPGLPGPK GQQGVTGPSGIPGPPGSPGFDGKPGQKGEVGPYGPPGPRGFPGPPGPEGLPGTMGPPGAP SVAHGFLVTRHSQTTEEPSCPFGTRLIYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCSVCEAPAMVIAV HSQTIQIPPCPEGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG TCNYYANAYSFWLATIERNEMFKKPTPSTLKAGDLRSNVSRCQVCMRKT NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atgcggctctgcctgggcttcgggctgctgctgagcgccgggctcagcgccgtgtctgcc gcgggttgttccggttgtggaaaatgtgactgcagtggagtaaaagggcaaaagggagaa agaggcttgccgggactacagggtgtgattgggtttcctggaatgcaaggacctgaaggt ccccctgggccaccagggcttaagggtgatactggagaaccaggactgccaggaacaaaa ggaacaagaggccccccaggaacatcaggctttccaggaaacccaggccttcctggcatt cctggacaagatggccctcctggtccacctggcattccaggatgtaatggcacaaagggt gaaagaggtccagtaggtcccccaggtttaccaggactgagtgggagcataggaccccca ggacctcctggaatgaagggagatccaggtgaagtgattggtcttttacctcctagtgtg ctaaaaggtgataaaggctttcctggccaacctggactacctggtccacctggaactcca gggtttcagggaccaatgggtccacaagggcctccgggagatccaggtcccccagggcca ccaggactcccaggtgagaagggctacatgggcttgggctttcagggacccaagggtgaa aagggagaacaaggggtaagaggccctccaggcccgccaggaccagcaccacatatgaaa gaaaaagggagtgaagtcataaagggagaaaagggcgatccaggtgaaaagggtgaacag ggagccccaggattgccaggttcaggtttccgaggagaaaagggagaacctgggaagcct ggtccacgtggaaagcctggaaaagatggtgaaccaggaccaaaaggagaagccggtttg cctggtgggtttgggattccaggacgacctggggagcctggtgcaaagggtgacaaaggt gaacgaggttttccagggcctccaggaagacttatagatcctggaccaatagataccttt ggtgaaaaaggagagcctggagtttcaggtttgcctggactgaaaggtcaaaaaggtgaa aaaggtttccctggtatacaaggaatcccaggacctccaggtcgaccacttccagacagg gtaggatcacctggtgtccctggagagagaggtgaaaaaggtgaaaagggttctccagga ttccctttacctggaccccctggaagagatggtttcccaggtcccccagggttgcctggc ccaccaggtcctccaggcaaaacagatggaattgatcaatgccagcagggagaacctggt gcaccgggtagtcctggacttccaggaagagatggatttccaggagagatgggagagaaa ggtgacaaaggtgaatcctgtgtcttatgtgataaagtaggacctcctggacttccagga ccacaagggccaccaggtccagcaggttttccaggacaatcaggcttgaagggtgacaga ggcttacctggacttgatggccttccaggggtacctgggccccctggcactccaggactt atgggcagcccaggggcaaaaggagaaccaggagatttttcttatgattctatcctgaaa ggtgaaaagggagatcctggtttcccagggcaaccaggtactcctggaagagaaggaaga ccaggaaaagatggattgccaggtccccagggtccgaaaggagcatcgggtacagctggc ttgaaaggagaacgtggtccccctggccaacctggattccctggagtacgtggtgaaaga ggttttcctggccctccagggataggcgcggcagggttacctggtgacaaaggagacaga ggctttgctggaaccccaggtttaccaggccttccaggagcaaagggtgaagcaggacga agtgtaccacttcccggacctcctggggcggatggccttcctgggccacctggtttccct ggaccccaaggtgacaaagggaatcctgggcttccaggtagacctggcctgccaggagaa aaaggagctgttgggcagcctggtatagggttccctggacctccgggacccaaaggtttc caaggtcagcctggctcgcctggtctgccggggactccgggaacccctggccttgatggt ttgccaggtgtaccaggtttacaaggtcaaaaaggtgaacctggtgtaggtctccctggc cctaagggattgccaggccccccaggcccagctggcatccctggagaaaagggaaatcct ggactgcctggcttacgtggggagcaaggctttccgggcatacctggacagcaaggattc agaggtgaccccggcctcccaggactgcaaggcttgcagggccctccgggcgcgccgggg ctgggcccacaggggtcgccaggacccgctgggcagccaggactccagggaccgccagga cttcctggaataaaaggagaaaggggcttccctggtattccaggtctagatatgccagga ccaaaaggagataaaggtagccagggacagcctggagtaccagggtctgtgggattacct ggcctaccgggtccacagggggctgttggactgaaaggatcagcaggagccaaaggagaa atgggagtcatgggaactcctggactgccaggaactcctggaccagttggagatcgaggg ttgcctggtgaaaaaggtagccaaggtttcaaaggtgtagttggaccacagggtgatcct ggtgtcaaaggagataaaggtgaagccggtctcccaggaaaacctggaacaatggacacc atggacatggttagtctcaaaggccaaaagggagatcaaggagaaaaaggggaccacgga gcaacaggagaaaaagggttacgtggggaatatggagacccaggaattcctgggaaggat ggtgaacctggtactccaggacatccaggaccaaaaggtgatcagggccccccaggatac ccaggggatccaggaattccaggacaaaaaggatccgttggtgaaatgggtttgccagga acacctggagaaaaaggtctgccgggagtaccaggttcaccaggcacaccagggttccct gggcagaaaggtgaaaaaggagacaaaggagcaccaggttttcctggaattggctttcca gggtctcctggtgagaagggagaaccaggaagaacgggtagtccaggaatatctggagat aagggtgaaaagggtagtgcaggaattcctggaatgccgggttccccaggtcccaaagga tcccctggcatggcaggatttccagggagccccggccgccatggagaaaagggtgaaaaa ggacttcctggcttaagtggcattccaggtttaaaaggagagcaaggtgaacctggtgtt ccgggtcctgctggttctattggacagaagggtgaaccaggttatgatgggatcccaggt gcagctggtgcaaagggtgaacaaggtgttccaggcagaggacttccaggatttcctggt gcaaagggagataaaggtgcgaaaggtgaagtgggttttccaggatccccaggaagtccg gggatcccaggcctgaaaggagaaccaggatttgatggtccaccaggccctaagggcagc cagggtcttcctggactcccaggaagtgcaattgagggccctaaaggagacagaggaccc caaggccaacctggccttccaggtttacctggtccaacagggccaccaggacccccaggt ctgaaaggggccaaaggagaccaagggagcaatggctggcctgggactcctggaagtcca ggagtcaaaggtgatccaggtttccagggtctaccaggtagtcctggtttaccaggagat actggtcaaaagggtgatctgggacctccaggagttccaggtgttccaggtccaaaagga tctcctggcttcccaggccttaagggtgagcaaggtgaacaaggtcttcctggatctaaa ggtttacagggcccaccaggcccaccaggtgcttttcagcttgttaaaggggatcctggc ttacctggccctgtaggaccagttggtctcaaaggattcccaggacttccaggtcccaaa ggacagcaaggggtgacaggaccttcaggtatacctggaccacctggtagtccagggttt gatggcaaacctgggcaaaaaggagaagttggtccttatggacccccagggcccagagga ttccctggtccacctggccctgaaggcttgcctgggactatgggcccaccaggtgcacca tctgttgctcatggcttccttgttaccagacatagtcaaaccactgaagaaccatcatgt ccatttggaacaaggctgatttaccatggctactccttgctttatgtacaaggcaatgaa agagcacatggccaagatctgggcacagcaggaagctgtcttcgtaaatttagtaccatg cctttcctattctgcaatatcaacaatgtatgtaactttgcatcaaggaatgactattcc tactggctgtccactcctgaacctatgccaatgagtatggctcctatcactggtgataat atcagaccattcatcagcagatgctctgtgtgtgaagctcctgctatggtaatagccgtt cacagtcaaacaattcaaataccaccatgtcctgaaggctggagttcactttggattggt tactcttttgtcatgcacaccagtgctggtgcagagggctctggccaggccctggcgtct cctggttcctgcctagaggagtttcgcagcgctcccttcattgaatgccatggccggggc acctgcaattattatgcaaatgcttacagcttctggcttgccactatagagaggaatgag atgttcaagaaaccgactccctcaactttgaaagcaggggatctgcgctcaaatgttagc cgttgtcaagtctgtatgagaaaaacataa

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