Tyto alba (Barn owl): 104362335
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Entry
104362335 CDS
T07816
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
tala
Tyto alba (Barn owl)
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tala04131
]
104362335 (VPS13A)
Membrane trafficking [BR:
tala04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
104362335 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
DUF5764
Motif
Other DBs
NCBI-GeneID:
104362335
NCBI-ProteinID:
XP_042643811
LinkDB
All DBs
Position
Unknown
AA seq
3208 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGAVALKNLEIKENALSQLDVPFKVKAG
HIGQLNLQIPWQNLYTQPVEAVLDGVFLLIVPTASIKYDAEKEARQLLEARQRELQRIEE
AKQKIADQDKEKEEKQDTFVEKLVTQVIKNLQVKISNIHIRYEDDITNRNNPLSFGISLQ
NLSLQTSDKNWNPCLHDETAKLFYKLVRLDNLFAYWNVKSEMFYHGGCDESLVNLKQGVA
SHNVIPEGYDFVFRPISAKAKLLMNPRSDVDFSSPKMDLDVNLQDITVEFNKPQYFSVME
LLESIDMMTRNLPYRKYRPDVPLHNNAKTWWKYVIYGILEVNIQPKLQMWSWEHIRHHRK
QVKNYKEMYKMKITSKKPNEEILKLLEEFEKALDIFNITLARQQAEVEATKAGLKIYRPG
VKQDDENSGGWFSWIWSWSGERKDEQKQEVKGSSLEELMTREEKAKLYAAIGYSETAVDP
TLPKSYEAMKFSVNLLSMSISIRENKQTPELVVFALTGLSTVFTQRPGAQAIRFETKITS
LEVTGMSREKCTPCLLSSRTVYSDKSTSLLSIMFETNPLDEKADQRLRIESQPLEIVYDA
MTINSLVDFFRPPKDVHLEQLTSATLMKLEEFREKTSTGLLYVIETQKVLDLKINLMASY
IIVPQKGFYDRTSNLLLLDLGSLKMKSKSRSDLSELKVGQSTIEDIMSRAYDSFDIQLSS
IQLLYSKHDENWQEARKLKYSSQHILQPLDVKVEFSRAMVVTDARMPKFKLSGQLPLLSI
QISDRKLTSILELIDSIPKPESAPATSSPPKITEAAISPVLSAPHLSQGLFPVLDLHSFA
ESESEEEFYDALSSPVEDMPFFEAPSGSLKRASSTRRRKLRKQESLKNMTEFQLRFEVAE
VLIKLCRLTGNTETPVLQLDIVGLGTELKLRTFDMTANAFLREVCLLCPEYMDDNDKPVY
IVTTLDNVADDLLALEYIKADINGPELKTAYQNVLQKIKVNFSSLDIHLHTEALLNAMNY
LNNLLPKQETKVAEEPVHEKTEEKKDVLKKLTSKKSKYEDVIDLNICADLSCLRIFIREK
KHRIAEIHIEGLDSQVIMKKAATEVTAKLKNIIIVDSDEMALYKKALYITGKEVFNFRMI
SYVNATDGIAYTNMDVVDNRIYLTVGCIQVVFVNKFVSTVLAFINNFQAAKEALTEATVQ
AAEKAATGVKELAERSSRLALDINIKAPVVIVPQSAMSANVLVADLGLITVKNQFFIAKT
KTRYNLPPVVDSMTVKLSELKLYRSCFEQGSLQTEVQLLQPLNLEVAVERNLAAAWYNEV
PDIEISGRLKPMNLILSQEDITTILRTLNENIGGSSGASASLPEPKDTTSHCSDMHSTSQ
HSAGVTVVTSAVVELHSPMKIKTTLKLDFRFDSLTLVLYSPNSKQVTNLDQRDDLLKLAE
FKLVLMSAAVKMLSDGSMNASVKLANCTLDDKRQSIQKATPRMVEMKHGFEKKVMVDISY
KQGRDGTILDVIVQEIYLCASMEFLLTVADIFLKANAESAAAQRNLKQSLPLKEQAPVQP
VSTMEMNIVVKNPEIVFVADLTRSDAPALVVTTQCEVFIKNSPERYSMTAAVKEIQMKAC
PFLPEQRKGNITTVLQPCDFFFEMKQSGTDPQTADLTIKSLTIKVSPIIINTVITITSAL
YQTTETTEEEISQIPPDLWNKKDIKNLKMWFLEESNENEDTNPTAELVPTGESLKMNIES
VFLTLEAGVGHRTVPMLLAKSSFIGEVKNWSTLINLRSRLGLEVHYFNEMFGVWEPLLEP
LEVEKTDFFKPWTLEIKMKKKAKKALVESDAEEENYKVPEYKTVIHVSSKDQLNITLSKC
GLQMLSNLGTAFAEAASQTSDIFKKDRAPFVIINSLGLPITVSPSDSFSVLNVEFGAKLF
HLRDGENLNMEFVRTKNESDQFTAMTTLSSKRFYIQICPHNHSTVEKIPLTKVGRCIYSV
RHEESGVERFIVCQIDTVEGSKMITIRSPVQIRNHFSIPLNIFEEGRCLGTASPENEFNI
PLSSYRSVLSLQPLASENGVDGEYDMCEGITFDEIMKNVDSLLQRKCQSVRSTNHSLIIN
IVPVKDTLTSSLYADDQWDFPYVVHLWPSVLLRNLLPYQITYSVEGNGNKYDTLQEGCSA
QIHNAVLDQTKLDLQLLNYLDQNWKSEYHIKSSLPDISFTTFYCITELDKTELDIAVHVT
YTTGQVVIAIHSPYWMVNKTGRMLQYKADGIHRKHPPDYKKPLLFSFQPKNFLQNNKVQL
MVTDSELSDQFSLDTVGSHGSVKCKSHKKEYQVGVTINNSSFNITRIVTFTPFFMISNRS
KYTLEVAEEGKEKWIPIVLQQWCEKQWERELSGMCIPFWPESDANKLLVRVENSDLPPKK
INFDKQENCLLLHLDNKLGGITVDVNLTEHSTVITFSNYHDGAAPFLLINHTKEDIIEYG
QSSLSELEDCLQPNKAVLYTWADPAGSRKLKWKCGNRTEEITPKEDKMEILSLDCRKVVY
LVSFFEGLQRIVLITEDENVFKLTYESVKAELAEQEIVLSLQDVGISLVNNYTKQEVSYI
GITSSDVVWETKPKKKSRWRPMSVKQTDKLEQEFKDYSELTPSENKIIELESNVLVCLTP
NGMNMKIQQPNEIPIRRNYLPALKVEYSSSAHQKSFRIQIYRIQIQNQIPGAIFPFVFYP
IKPPKSITLDSAPKPFTDVSIVMRTAGHSQISHIKYFKVLIQEMDLRLDLGFLYALVEFF
TQTDVPGDQELELFKKDVESLQEELMSVSSMDTSQISLYEYFHISPIKLHLSFSLSTGGE
DSNKEERKNELIPLQSLNLLLKSIGATLTDVQDVVFKLAFFELSYHFCTTQQLQSAVVRH
YSKQAIKQMYVLILGLDVLGNPFGFIRGLSEGVEAFFYEPYQGAIQGPEEFIEGMALGLK
ALVGGAVGGLAGAASRITGAMAKGVAAITMDEDYQQKRREAMNKQPTGLREGITRGGKGL
VSGFVSGITGIVTKPIRGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKKV
ADSSEDVISLRPPRFFGEDGVIRPYRLRDGTGSQMLQKIENGRFAKLRYIAHAMVNSTDL
LMVTKSGVLFVTKGTFGQLTCEWQYTYDEFTKEPFIVDGRRLRIEAKERVKSVFHAKEFG
KIINFKSPEDAKWILSKLEEVRENQPKL
NT seq
9627 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcgctggtcgtggacgtcctgaaccgcttcctcggagactacgtggtg
aacctggacagctcccagctgaagctgggcatctggggaggagctgtagcactgaagaat
cttgaaataaaagaaaatgcactgagtcagctggatgtgccatttaaagttaaagcagga
catattggtcaacttaacctacagattccatggcaaaacctttatactcaacctgttgag
gcagttcttgatggagtttttttgcttattgtgcccacagccagtataaaatatgatgct
gaaaaagaagccagacagctcttggaagcaagacagagggaattgcaaaggatagaggag
gcaaagcagaaaatagctgaccaagataaagaaaaagaagagaaacaagacacttttgta
gaaaaactagtcactcaggtcatcaaaaatcttcaggtgaaaatttccaacatccatatt
cgctatgaagatgatatcacaaatcgaaataaccccttgtcttttgggatttcacttcag
aatctaagtttgcagacctcagataagaattggaatccatgtttacatgatgaaactgcc
aagttgttctacaagcttgtacgactagataacctttttgcttactggaatgtgaaatcg
gagatgttctaccatggtggttgtgatgaatcgttggttaatttaaaacagggagttgcc
agccacaatgtgattccggaaggttatgattttgtattccgcccaatttcagctaaagcc
aaactccttatgaatcctcgatcagatgttgacttttcatcaccaaaaatggatttagat
gtaaatttacaggatataactgttgaattcaataagccgcagtacttcagtgttatggag
cttcttgagtctattgatatgatgactcgaaatctgccatataggaagtacagacctgac
gttccattgcacaacaatgccaagacatggtggaaatatgttatttatggcatccttgaa
gtaaatattcaacctaagctccaaatgtggtcatgggaacatattcggcaccataggaaa
caagtgaagaactataaagagatgtataaaatgaagataacatcaaaaaaacctaatgaa
gaaatcttaaaattgttggaggaattcgaaaaggccttggatatttttaacatcacttta
gcaaggcaacaagcagaagttgaggcaactaaggctggattaaaaatctacagaccagga
gtaaaacaagatgatgaaaattctggtggctggtttagttggatatggagctggtcaggt
gaaagaaaggatgaacaaaaacaagaagtaaagggttcaagtcttgaagagctgatgaca
cgtgaagagaaggctaaactttatgcagcaattggatatagtgaaacagctgtggatcca
acccttccaaaatcatatgaagccatgaagttctctgtgaatttattaagcatgtctata
tctataagagaaaacaagcagactcctgagctggtagtgtttgcattaaccggcttgagt
acagtatttacgcaacgaccaggtgcacaagcaataagatttgaaacaaaaattacctca
cttgaagttacaggcatgtctcgggaaaagtgtacaccctgtctcctatcttctcgaacg
gtctattcggacaagagtacctcgcttttaagcataatgtttgagactaatcctttggat
gagaaagcagatcagaggcttaggatagaatcacagccattggaaatagtatatgacgcg
atgacaataaatagcttagtggatttcttcagacctccaaaggatgtacatttagagcag
ttgacatcagcaactcttatgaagcttgaagagttccgtgaaaaaacatcaacaggactg
ttgtatgttattgaaacccagaaagttcttgacctcaaaattaacctcatggcttcatac
atcattgttccacaaaagggattctatgaccgtacatcaaatttactacttctggatctt
ggtagtcttaagatgaaaagcaaaagtcgttcagatttgtcagaactcaaagtaggacaa
agcactattgaagatataatgtcaagagcttatgacagttttgatatccagctcagcagt
atacagttactgtacagcaaacatgatgagaactggcaagaggctcggaagctgaaatat
tcatctcaacatatcttgcagcccttggatgtaaaagtggaatttagcagagctatggtt
gttacagatgcaagaatgcccaagttcaaactgtctggacagctgcccttactttctatc
caaatatcagaccggaagctgacaagtatcttggagctaattgatagcattcctaagcca
gaaagtgctcctgctaccagttctcctccaaaaataactgaggctgcaatatcccctgtg
ctctcagcaccacatttatcgcaaggtttgtttcctgttttggatcttcattcatttgcg
gagtcagaatcagaagaagaattttatgatgctttaagcagtcctgtggaagacatgcca
ttttttgaagctccatctggttccctcaaacgagctagcagtacaaggcgaagaaaacta
cgtaaacaagaatctttgaaaaatatgacagaattccagctaaggtttgaagtagctgag
gtcttaattaaattatgccgtcttactggtaatactgagacacctgtgctgcagcttgat
attgtagggttaggcactgaacttaaattgagaacatttgacatgactgcaaatgctttc
cttcgtgaagtttgtctgctgtgcccagaatatatggatgataatgacaagccagtttac
atagttactactttggataatgtagcagacgatcttcttgctctggagtacataaaggct
gatattaatggaccagaactgaaaactgcctatcagaatgttctacagaaaataaaggta
aacttttcatctcttgatattcatttgcatactgaagctctgctgaatgctatgaactat
ctgaataatcttctaccgaaacaagaaactaaagttgcagaagaaccagtccatgaaaaa
acagaggagaagaaggatgttcttaagaaactgacatcaaaaaaatccaagtatgaagat
gttatcgacctcaatatctgtgcggatttatcctgtttacgtatctttattagagagaaa
aaacatagaatagctgaaattcacattgaaggtctggatagccaagtgatcatgaagaaa
gcagcaacagaagtgactgcaaaattaaagaacatcattattgtggattctgatgagatg
gcattgtataaaaaggctctttacatcacaggaaaagaagtcttcaacttcagaatgata
tcatatgtgaatgctactgatggcattgcgtatacaaatatggatgttgttgacaatcgt
atttacctaactgttgggtgtattcaagtagtttttgtcaacaagttcgtttcaactgtt
ttggcttttataaataactttcaagctgccaaggaggctcttactgaggcaactgttcaa
gcagcagagaaagcagctacaggtgtaaaagagctagcggagcgtagttcccgtttggca
ctagatatcaatattaaagcacctgttgtgatagttccacagtcagcaatgtctgcgaat
gtcttggtggctgatcttggtttaatcaccgtgaagaaccaattctttatcgctaaaaca
aaaacacggtataatctcccgcctgttgttgactctatgacagtgaaattgagtgaacta
aagttatacaggtcatgcttcgagcagggttcattgcaaactgaagtacagctgctgcag
ccactcaatctggaagtagctgttgaacgaaatttagctgctgcatggtataacgaagtt
cctgatattgaaatatctggccgactgaagcctatgaatctgattctcagtcaggaagat
attaccacaatattgagaacactaaatgaaaatataggtggaagctctggtgcatcagca
tctttaccggaaccaaaagatacgactagccattgtagtgatatgcatagtacttcacag
cactctgcaggtgtaactgttgtaacatcagctgtggtggaattgcattcacctatgaaa
ataaagacaacactaaaactggacttcagatttgactctttgactttagtattgtatagt
ccaaattcaaaacaggttacaaatttggatcagagagatgaccttttgaagcttgcagag
tttaaattagtgttgatgtcagctgctgtcaaaatgttatcagatggttcaatgaatgct
tcagtcaagctggcaaactgcacattagatgataaaagacagtcaatccagaaggctacg
ccaagaatggtggaaatgaaacatggatttgaaaagaaagttatggtggatataagctat
aagcaggggagagatggcactattcttgatgtgattgttcaggagatatacctttgtgca
agcatggagtttctacttactgttgcagatatattcctaaaggctaatgcagaaagtgct
gctgcacaaagaaatctcaaacagtcattacctttaaaggagcaagcacctgtgcagcct
gtatctacaatggaaatgaacattgttgttaaaaatccagagattgtgtttgtggctgat
ttaacaagaagtgatgctcctgcattggtggttacaacacagtgtgaggtcttcattaaa
aatagccctgaaaggtatagcatgacagctgctgttaaagagatacaaatgaaagcttgc
ccatttcttccagagcaaaggaaagggaacattactacggtattacagccttgtgacttc
ttctttgaaatgaaacagtcaggtactgatccacagacagctgatctaacgattaaatct
ctaacaataaaagtttcaccaataatcataaacacagtaattactataacatcagccctc
tatcaaactacagaaacaacagaagaagagattagtcaaattcctccagatttgtggaat
aagaaagatataaaaaacctaaaaatgtggtttcttgaagagtcaaatgaaaatgaagat
acaaatccaactgctgaactggttcccacaggagagtcattgaaaatgaatatagaatct
gtttttctaacacttgaagctggggttgggcaccgaactgtaccaatgcttttagccaag
tcctcatttattggagaagtcaaaaactggagtactctaatcaacctacgttctcgtctt
ggtctagaggtacactattttaacgagatgtttggcgtgtgggaacctttgcttgaacca
ctggaagttgaaaagactgattttttcaaaccatggactcttgaaatcaagatgaagaag
aaggctaaaaaagctttggttgaatcagatgcagaagaagaaaactacaaagttccagaa
tataaaacagtaatacatgtttcctcaaaagaccagctgaacattacactgtctaaatgt
gggctacaaatgttgagtaacttgggcacggcatttgctgaagcagctagtcaaacttca
gacatcttcaaaaaagatcgagcaccatttgtaataataaattctttaggacttcccatc
actgtctcgcctagtgattcctttagtgtccttaatgttgaatttggagcaaaattattt
catttaagagatggagagaatttaaatatggaatttgtcagaactaaaaatgagagtgac
cagttcacagcaatgacaactctgagtagcaagaggttttacattcagatctgtccacat
aatcattccactgtggaaaagattccattgacaaaagtgggtcgatgtatttacagtgtg
agacatgaggaatcaggtgttgaaaggttcattgtctgccaaattgatactgttgaagga
agcaagatgataactatacgttctcctgttcagataaggaatcatttttcaatcccatta
aatatttttgaggaaggaagatgtttaggaactgcttcaccagaaaatgaattcaacatt
ccattgtcctcttacagatccgtactgagtttgcaaccgctagccagtgaaaatggagtg
gatggagaatatgatatgtgtgaaggaattacatttgatgaaattatgaaaaatgttgat
agtttattacaaaggaaatgccagtctgtgaggtcaactaaccactcacttatcatcaat
attgttcctgtaaaagacacgttgacatcttcattatatgcagatgatcaatgggatttt
ccatatgttgttcatttatggccttctgttcttcttcgcaatcttcttccttatcaaata
acttattctgtagagggaaatggaaacaaatatgacactctacaagaaggatgttcagcc
cagattcataatgcagtcttggatcaaacaaaactagatttacagttgcttaactatctt
gatcaaaactggaaaagtgagtaccatataaaaagcagtctacctgatatcagcttcaca
acgttttactgcatcacggagttggataagactgagctggatattgctgtccacgtgacc
tacacaacggggcaggtggttatagcaattcacagtccatactggatggtaaataaaact
ggtcgaatgttgcaatacaaagctgatggtattcaccgcaagcatccaccagattacaaa
aagccgctccttttttctttccagcccaaaaacttcctccaaaataacaaggtgcaactt
atggtaactgacagtgaactgtctgatcagttttcactggacaccgttggaagtcacggt
tctgtgaaatgcaagagtcataaaaaggaatatcaagttggtgtcaccataaacaatagc
agttttaatattactagaattgtgactttcactccattttttatgatctcaaatagaagc
aaatacactttggaagtagctgaagagggcaaggaaaagtggattcctattgttttacaa
cagtggtgtgagaaacaatgggaaagggaacttagtggcatgtgcattcctttttggcct
gaaagtgatgccaacaaactgcttgttagagttgaaaattctgatctccccccaaagaag
ataaattttgataagcaagaaaactgtctgctactgcatttggataacaagcttggagga
attacagtggatgttaatctgactgaacattctacagtgattaccttttctaattaccac
gatggcgctgctccatttctcttgataaaccatactaaagaggacattattgagtatggc
caaagctccctcagtgaattggaggactgtcttcagccaaataaggcagtgctgtatact
tgggcagacccagcaggatctagaaaactgaaatggaaatgtggaaatagaactgaggaa
attaccccaaaagaggacaaaatggaaatactcagcctggattgtagaaaagtggtctat
ttagtttcattttttgaaggtttgcagcgtattgtcctcatcactgaggatgagaatgta
tttaaattgacatatgaaagtgtaaaagcagaactagcagaacaagaaattgttctgtct
ttgcaagatgttggaatttcactggttaataattatacaaagcaagaggtgtcctacatt
ggaattacaagttctgatgtggtttgggagacaaaacccaagaagaagtcaagatggaga
ccaatgagtgttaagcagactgataaattagaacaagaattcaaagattacagtgaacta
actccttcagaaaataagattattgagttggaatcaaatgttttggtatgtttaactcct
aatggaatgaatatgaaaattcaacaaccaaatgagattcctatcagaagaaattatctg
ccagctttaaaagtagaatacagttcatctgcacatcagaagtctttcagaattcaaatt
tacaggatacagatacaaaaccagattcctggagccatatttccctttgtgttctatcct
attaaacctccaaagtccatcaccttggattcagcaccaaaaccatttactgatgtcagt
attgttatgagaactgcaggacattcacaaatatctcatattaagtattttaaggttctg
attcaagagatggatctcagattagatcttggcttcctgtatgctctagttgaatttttt
acacagactgatgtgccaggtgaccaagagctagaacttttcaaaaaggatgttgaatct
cttcaagaagaactgatgagtgtgtcatcaatggatacttcacaaatcagcttgtatgag
tactttcatatctctccaattaagttacacttaagcttttcactcagtaccggtggagaa
gatagtaacaaagaagaaagaaagaatgaattgataccacttcagtccttgaatctcctg
ctgaagagtataggggccaccctcacagatgtacaagatgttgtctttaagttagcattt
tttgaactcagctatcatttctgtactacacagcagctccagtcagcagttgtaaggcat
tattcaaaacaggctattaagcagatgtatgttcttattcttggccttgatgtcttgggt
aatccatttggattcataagaggcttgtctgaaggagtagaagcattcttctatgaacct
taccagggtgccatccagggtcctgaagagtttatagagggaatggcactaggacttaaa
gcactagtagggggagctgttggtggattagctggtgctgcatcgagaatcactggtgct
atggcaaaaggggtcgctgcaataactatggatgaggattaccagcagaaaagaagagaa
gccatgaataaacagcccactggtctgagagagggtatcactcgtggtggaaaaggatta
gtttctggttttgtcagtggcataacaggaatagttacaaaaccaataagaggagctcag
aaagaaggagcggctggttttttcaaaggtgttggaaaaggcttagtgggagcagtagct
aggcctactggaggaatcatagacatggcaagcagcacatttcagggtattaaaaaagtt
gcagattcatcagaagatgtaataagcctgcgcccacctcgattctttggtgaagatgga
gttattagaccttacaggttaagagatggaactggaagtcaaatgttacagaaaattgaa
aatggaagatttgcaaaactcagatacattgcacatgctatggtcaacagtacagatctg
ttaatggtaactaaaagtggtgtgttatttgtgacaaaagggacatttggacagctgaca
tgtgaatggcaatacacttatgatgaatttaccaaagaaccattcatcgttgatggcaga
agattacgcattgaagccaaggaacgagttaagtctgtgttccatgccaaagaatttgga
aaaattattaattttaaaagtccagaggatgctaagtggatcctttcaaaactggaagaa
gtgagagagaatcagccaaaattgtaa
DBGET
integrated database retrieval system
