Tyto alba (Barn owl): 104363706
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Entry
104363706 CDS
T07816
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tala
Tyto alba (Barn owl)
Pathway
tala02010
ABC transporters
tala04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104363706 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104363706 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tala02000
]
104363706 (ABCA1)
Transporters [BR:
tala02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104363706 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
104363706
NCBI-ProteinID:
XP_032865126
LinkDB
All DBs
Position
Unknown
AA seq
2262 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQMLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDAKRLLLYSQQDT
SIKDVQKVLGKLRKLGNSYGSDLKLRDFLVDNETFSDFLHHNVSMPSSAAKELLDAEVNL
QQVIVSGYRMRLQDLCNSSSLSEFLTIQNKTAAMDSEAFLCTLPKEKLHAAEQAFHANLN
PLKPLQRRLTLNSSLWDLSETVEALRDSLGKLVKELLSMKSWSDMRQEVMFLNNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVTNFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAVRKVMTEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKGKALWDLHLPATNWTVEDVAHFLSNHPEDFETANG
SVYTWMDAFNETDRAIQTISRFMECVNLDKLEPVATEVRLINKSLELLDERRFWAGIVFT
EIAPNSIELPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDV
VEQAIIRVQTGTEKMTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSVVF
VFLSIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDYVSFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEEAQDRQHPHSDQKGPSEVCKEEEPMHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMAIDV
GLPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDVFDPNDSDIDPAESRETDLLSGMDGKGSYQM
RGWKLTQQQFMALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYDEQYTFISNDAPEDTGTQRLLDALLNKPGFGTRCMQGHSIPDTPCSVGQREWTTA
SVPDSVLDIFLKGNWSMENPSPSCECSSEKIKKMLPVCPAGAGGLPPPQREQDTADILQN
LTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASSSLMLPPSHEVTDAIKQVK
KILELTQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQ
EGKNPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPVLA
LLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTK
IYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILS
NIQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGE
KYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFF
GHAFPGSVLKEKHRNMLQYQLPSSPSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagctgggattgctactatggaagaacttcacctacagaagaaga
cagactttccagatgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctatgagcagcatgagtgccacttcccaaataaagct
atgccttcagcaggaactttgccatggatacaggggatcatctgcaatgccaacaaccct
tgtttccgctacccaactccaggggaatcccctggtattgttggaaacttcaatgcctcc
attgtttcccgcctgttctcagatgccaagaggttactcttatacagccagcaggacacg
agcataaaggatgtccagaaagtcctgggaaaactgcgcaagttggggaactcctatggc
tcagacttgaaacttcgggatttcctggttgacaatgagactttctcagacttcctccat
cataatgtgtccatgccatcatctgcagcaaaggagctactggatgcagaggtcaacctc
cagcaggtcattgtgtccggttacagaatgcgactgcaagatctctgcaacagctcatca
ttgtctgaatttcttacaatccaaaataagacagcggccatggattctgaagcctttctt
tgcaccttgccaaaggaaaaactccatgcagctgaacaagccttccatgctaacctgaat
cctctgaagccccttcagagacgacttactttaaattcctccttgtgggatctgtcagag
actgtggaagctttgagagatagccttgggaagcttgttaaagagttgctgagcatgaag
agctggagtgacatgaggcaagaggtgatgttcctgaacaatgtgaatgcctcaaactct
tctacacagatctaccaggctgtgtcgcgcatcgtttgcggccatcctgaaggcggaggg
ctcaaaattaaatccctcaactggtatgaggataacaattacaaagcactgttcggaggc
aacagcactgaagatgatgtaactaacttctatgataactccacaacaccctactgcaat
gagctgatgaagaacctggaatccagtccgctttccaggattatctggagggctttgaaa
cccttgctgattgggaagatcctgtacactcctgacacaccagccgtaaggaaggtcatg
actgaggtgaacaggacattccaggagctgggtgtgttccgtgaccttggtgggatgtgg
gaggagataagcccaaagatttggacgtttatggaaagcagtcaggaaatggatctcatt
cggacactgctgaaaggcaaagctctctgggacctgcacttgccagctaccaactggaca
gtggaggacgttgcccatttcctgtcaaaccatccagaagactttgagacagcaaatggc
tcagtgtatacctggatggatgccttcaatgagacagaccgggctatccagaccatctcc
cgcttcatggagtgtgtcaacttggacaaactggagcctgtggccacagaagtccggctt
ataaacaagtctttggagcttctggatgaaaggaggttttgggctggtatagtcttcacc
gaaatagctcctaacagcatagagctccctcaacatgtgaaatataagatacgcatggac
attgataatgtggaaaggaccaacaagatcaaggatgggtactgggatcctggtccccgt
gctgacccctttgaggatatgcgctatgtttggggaggctttgcctacctgcaggatgtt
gtggaacaggccatcatcagggtgcagacaggcacagagaagatgacaggagtttatgtg
cagcagatgccatacccgtgttacgtggatgacatatttctgcgtgttatgagccgctcc
atgcctctcttcatgactctagcctggatctactcagtggctgtgataattaagggcatt
gtgtatgagaaggaagcccggctgaaggagacaatgaggattatgggacttgacaatggc
atcctttggctaagctggttcattagcagcctcatccctctcctgatgagtgcaggcctg
ctggtactgatccttaagatggggaatctgctgccctacagtgaccctagcgtggtgttt
gttttcctctcgatcttcggtgttgtgaccatcctccagtgcttcctcatcagcactgta
ttctccagggccaatctggcagctgcctgtgggggcatcgtctatttcacactgtacctg
ccttatgtgctgtgtgttgcctggcaagactatgtcagcttctcactcaagatctttgcg
agcctgctgtctccagtagcctttggctttggttgtgagtactttgcactctttgaggag
cagggagttggtgttcagtgggataacttctttgagagcccattggaagaagatggcttt
agcatcaccacatctgctgtcatgatgttgttcgacaccttcctatatggggtcatgacc
tggtacattgagtctgtcttcccaggccagtatgggattcccaggccctggtacttccct
ttcacaaagtcctattggtttggtgaggaagcacaggacagacagcaccctcattctgac
cagaaagggccttcagaagtctgcaaggaggaagagcctatgcatctgagccttggggtt
tccatccagaacctggtcaaggtttatcgtgatggcaagaaagttgctgtagatggtctc
acactgaacttctatgaggggcaaatcacctcctttctgggacataatggagcagggaaa
accactacaatgtccatcttgactggcttgttccccccaacctcgggcacagccttcatc
ctgggcaaagatatccgctctgagctcagcactatcaggcagaacctgggtgtatgtcca
caacacaacgtgctgtttgacttgctgactgtggaggagcacatctggttctatgctcgg
ctcaaagggctgccagaaaagaaggtgaaagaggagatggagcagatggcaatagatgtt
ggtttgcctcacaaactgaaagctaggacaagcaaactctctggtggcatgcagaggaag
ctctcagttgcattagcctttgttggtggctccaaggttgtcattttggatgagccaaca
gctggggtggatccttattctcgcagagggatatgggaattgctcctgaagtatcggcaa
ggccgcactatcattctctccactcaccacatggatgaggcagacattcttggggaccgg
attgccataatttctcatggcaagctctgctgtgttggctcttctctcttcctgaagaac
cagctaggaacaggctattatttgaccctggtcaagaaggatgtggattcttctctgagc
tcctgccgaaacagcagcagcacagtgtcctatctgaaaaaggatgacagtgtctcccag
agcagctctgacgctggccttggcagtgaccatgaaagtgacacactgacaatagatgtc
tctgcaatttcaaacctcattaccaagcatgttcctgaggccaggctagtggaggacatt
ggtcatgaattaacctatgtcttgccatacaaggctgccaaagagggagcttttgtggag
ctgttccatgaaattgatgaccgtctctctgaccttggcatttccagctacggcatctct
gaaaccactctggaggagatcttcctaaaagtggctgatgatagcggtgtagatgcagaa
acctcagatgggacactgccagccagaagaaacaggcgtgtgtttggagacagacagagc
tgccttcgtccatttactgaagatgatgtgtttgatcctaatgattcagacatagatcca
gcagaatccagagagacagaccttctcagtggcatggatgggaaaggctcctaccagatg
agaggctggaagcttacccagcagcagttcatggctctgttgtggaagaggctgcttatt
gccaagagaagccgaaagggcttctttgctcagattgtgctaccagctgtctttgtgtgc
attgctctcatgttcagcctgatcgttcctccctttgggaagtatcccagcctggaatta
cagccctggatgtatgatgagcagtacacttttattagcaatgatgctccagaagataca
ggcactcagaggcttttggatgcccttctcaataagcctggttttggaacacgctgtatg
cagggacactccatcccagacactccttgctctgtggggcagagggaatggaccactgct
tcagtcccggactcggtcctggacatctttttgaaaggcaactggagcatggagaatcct
tcaccatcttgtgagtgcagcagtgagaagatcaagaagatgctgcctgtgtgccccgct
ggtgcaggcgggctgccaccgccacagcgtgagcaagacactgctgacatcctccagaat
ctgacaggccgcaatatatcggactacctagtgaagacctatgtgcagatcattgcgaaa
agcttaaagaataagatttgggtgaatgaattcaggtatggcggcttttccttgggagcc
agcagctccctcatgcttcctccaagccacgaagtcactgatgccattaaacaggtgaag
aaaatcttggagctaacacaggggagttctggagatcggtttctcaacagcttgtcaagt
ttcatgaaaggcttggatactaagaacaacgtgaaggtgtggttcaataacaaaggctgg
catgccattgcgtccttcctgaatgtaatcaacaatgccatccttagggccaacctgcag
gagggcaaaaaccctagtgcttatgggatcactgccttcaaccacccactcaacctcacc
aagcagcagctctctgaagtggccctgatgaccacctctgtggatgtcctagtctccatc
tgtgtgatctttgccatgtcctttgttcctgccagctttgtggtcttcctcatccaagaa
cgtgtcagcaaggctaaacatttgcagttcatcagtggtgtgaagcctgtgatttactgg
ctggccaactttgtctgggatatgtgcaactacattgttccagctacgctagtcatcatc
atcttcatctgtttccagcagaagtcctatgtatcctcctccaacttgcctgtgctggct
ctccttctgtttctctatgggtggtccatcacccctctcatgtatccagcctccttcgtg
ttcaaaatccccagcacagcatacgttgtgctgaccagtgtgaacctcttcattggtatc
aatggtagtgtggccacctttgtcctggagctcttcaccaacaacaagctgaacaacatc
aatgacatcctgaagtctgtcttcctcatcttccctcacttctgcctggggcggggactc
attgacatggtgaaaaaccaggccatggctgatgctctggagaggtttggagaaaatcgt
tttgtgtcccctctgtcatgggacctggtgggaaggaacctctttgccatggcagtagag
ggcgttgtctttttcctcatcacagtgctcatccagtacaggttcttcatcaaacccagg
cctgtctatgccaagctgcctccggtgaatgatgaagatgaggatgtaaccagagagagg
cagaggataattagtggaggaggacagagtgacatcttggaaatcaaggagctaaccaag
atctacagaatgaagcgaaagccagcagttgatagaatctgtgttggaatcccccctgga
gagtgctttgggctcctgggagtcaatggtgctggcaagtcatccacttttaagatgcta
actggtgatacagatgtgacaggaggagaagctttcctcaaaggaaacagtatattgtcc
aacatccaagaagtccaccagaacatgggctactgcccacagtttgatgctgttaatgaa
ctgctgacggggcgagagcacttggagttcttcgcactcctgagaggtgttccagagaaa
gaagtctgcaaggttggtgagtgggcaattcgaaaactgggccttgtgaaatacggagaa
aaatatgctgggaattacagtggagggaacaggcgcaagctctccacagccattgccctc
attggagggccacctgtggtgttcctggatgagccaacaacagggatggatcccaaagca
cgtcgtttcttgtggaactgtgctctgagtgtaatcaaagaggggagatcagtggtgctc
acatctcacagcatggaagaatgtgaagccctgtgcactcgaatggcgataatggtcaat
gggcgattcagatgtctgggcagtgtccagcatttaaagaacaggtttggagatggttac
accatagtggtgagaattgcaggggcaaacccagacctgaagcctgttgaagagttcttt
gggcatgccttccctggaagcgtcctaaaagaaaagcatcggaatatgctgcagtaccag
cttccctcttcaccatcctccttggccagaatatttagtattctctcacagaacaaaaag
agactccacatagaagactactctgtttctcagaccacacttgaccaagtatttgtaaat
tttgctaaggaccaaagcgatgatgaccacactaaggatctgtcattgcacaaaaaccag
actgtggtagacattgcaatccttaattccttcctgcaagatgaaaaggtaaaagaaagt
tgtgtgtga
DBGET
integrated database retrieval system
