Tyto alba (Barn owl): 104364091
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Entry
104364091 CDS
T07816
Symbol
SETX
Name
(RefSeq) probable helicase senataxin isoform X3
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
tala
Tyto alba (Barn owl)
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tala03021
]
104364091 (SETX)
Enzymes [BR:
tala01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104364091 (SETX)
5.6.2.5 RNA 5'-3' helicase
104364091 (SETX)
Transcription machinery [BR:
tala03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104364091 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
AAA_30
Viral_helicase1
UvrD-helicase
AAA_22
AAA_16
ResIII
RNA_helicase
nSTAND3
DUF4164
Motif
Other DBs
NCBI-GeneID:
104364091
NCBI-ProteinID:
XP_032867880
LinkDB
All DBs
Position
Unknown
AA seq
2567 aa
AA seq
DB search
MSTCRWCTLSGSDTTEFLKSYASKQLSPEDLEGSSDDLCYCLECVVEYHKAREKLPRLHE
VLWELETSRLVAHIEKSMQEEAGEDDELFIVNENGDTQLSGYVGPDFENNLRVPLIEILK
YPYLLLHEKIAELCVEVLCRMEQSHSSFQVFEKYPGIYLFLVHPNEVIRRWAILTARNLG
KVDRDDYYDLQEVLTCLFKVIELGLFERPDIYSFSVVEKGKLILLPSHLYDTANYKNYWL
GICMLLTVLEEQAMDSLLLGPDKQNDFMQCILHTMEKEAADDSTDPFWPALHCFMVILDQ
LGSKVWGQLIDPVQAFQTIINSVSYNNEIKNIRSSFKRTKSEPESDYNDDMVTCSQIVYN
YNTEKPQKDTGWKTAICPDYCPNMYEDMQTLANVLQSDIGSEMRVHHSTFLWFIPFVQSL
MDLKDLGVAYIVEVIHYLCLEIRGILNERIQQCDKISEFFLLILVSIIELHRNKKCLHLL
WISSQEWVEAVVRCAKLPAIAFTRCTEKASGQYVRGSSAVSLQASNSVQHACVLLIRSLL
KEGYQIGQHALCKQYLDKLNLLLRGNLSLGWQLNIQETQELQMCLKQVTRSMKDRQLNTS
VPVGNNANSKTLPTISVKQEKSAHDGGCEASIHGRDDLCSPLAAISKEDGDEDYQNFFPG
RKTAWEEECRDATESSRSWTSTDVNIKKELNDLTTWEYGCPQNSLSTKVYGKIQENRSND
LVTVKCDTDNPCFNPNAQHSDFRRGGELESKCEAGTITPMQLAAQTCIGSPKHVYSSDVK
ERNMSPSSSSKFKVDVRRLVNLKSKVQKIKWSSKVLQPRNLKNYSLATSASKAEIEQSKF
CTGCLCTSKDCHKHQGVNTVCEKENSVGTSSSRSCEGMQEKNTNSGFQSRLTPTKQVSEE
TPLDCSSSSTNEPGTEENEDGSILLSGSSDTLLKKVSTEEKSCSVLKSVFKTDTDMQTSD
QDQPHLNDLVKYDCKGEISKTFCMDKTLAKGCVPSSSENKRVISNPASQIRPLLMKCESS
DRLFEFSKYFKRENNSVGRNKEDYVKMASEDNILTDSQVDRELSKLSLTAYAKSVNFPFD
SSQESSVHHDVCDIKRKVKGAVRSSSDGQSTVSPCDADCLDNQVIVISDSSDEEEGVADK
EASKEKNESVCPEEQPSISSCISDSGNKIESKTPNSPSSPLLLEDCESQYFEFETEDDVF
SVWQDTQENSMEATPEHMQHDVSTAVDNSNSDGLLNDHTNEWGYDVDYISDDTMEEEANL
AEKQVENISHQKETDNKEVVTNSTLQESISKGNSKDQLENFADKGSVAKGFTLDSKLTEP
RASTSNISLASKLALKKKSMSPRKRIAKSEIARTIQRSPKKPPVLKTAQNKKLLQITSKN
SQPGRLMPAVVPPRKVRQCPVPASTVEKLGLKKAPRKAFELSQRSLESLAQLRSYGKAAG
RVGVVQKKKTKLIAPQSLSVKYNKKLLACQDRQFLRQTRPQKSVRVKNTAGSSESRNKKV
SKVDTKSMKQKPKSFELASVEGSVEKKREETVCPSASERKFENLSVEEETCISKMPCSSD
SNRKSEDNSMMVPPVSRDSSLSAFVGDDKDEPSGKGFIVQPECEKTASKENGCKPNENTE
DDDDLFLTQLDPVDMELCSEEEGVQDTTIAGKNPEEVDTAESLQQNESSTIVKCKYKDCM
EKVEKPAVYCSKHPGTSSEADHLFAKPSLLPPKMKKPSTTKIFSSASSSRNAAFSKDLED
VKKLPPASKSKVNAAKLVVVRPPNARAIPIRNQTCKFPSFSNVPQPHISNNVLQPQNGQN
NNASNISRRPAQEDYSSFVGAQQRDHSIFVNEVLQWTYEMFANSSQFGPPINLLHSVVAS
VPVQFQGYNEYFNTFFPLMMLNAFETLAQEWIENQRVREKSYYFYLQNFCADMNTADFTA
HLQESDLARQLHPKEDDLIFFVVQKKKDTFKEESEMENHIVNHVGLVKRFSRASGCLTRQ
KEQRTVCHLSVQTRGNLSFFINKQVKCVVVGSLVTTHRTFKGLLLLNRNFLSKPIIYPKY
SDFCPRDLPAASESTALNMNEYNEDQKRAIETAYAMVKQHPELPKICLIHGPPGTGKSKT
IVGLLSRVLRENTRNEKTTQKTNSKIKLNRFLVCAPSNAAVDELMKKIIVTFKEKCQNKQ
EPLGNCGDIKLVRLGAEKAINSEVRGFSLDKQVEHRMKRKPADCDQDIQKKKAALDQKLD
MLSRQRAMHRCEKREVSQILDDEIGRLSKERQQLASQLKEVRVHSQKVQADIILESDIIC
CTLSTSGGSLLESAFWRQRLVPFSCVIVDEAGQSCEVETLIPLVHRCTKLVLVGDPRQLP
PTVKSIKAQEYGYGQSLMARLHTHLEQQVQSNVLRSLPVVQLTVQYRMHPDICLFPSNYV
YGGTLKTDKATEENRCSSEWPFQPYLIFDVGDGREERDNDSFSNPQEVKLVMELIRTIKE
KRKDLGVRRIGIITPYSAQKKKIQEQLDRVFRNNSPGEVDTVDAFQGREKDCIIVTCVRA
NSTKGSIGFLASLQRLNVTITRARFSLFILGRLKTLMQPECLLLFCK
NT seq
7704 nt
NT seq
+upstream
nt +downstream
nt
atgagtacatgtcggtggtgcacacttagtggttctgacaccactgagttcctgaagagc
tatgcttctaagcagttgtccccagaagatcttgaaggatccagtgatgacctgtgttac
tgcctggagtgtgtggttgaataccacaaagcaagggaaaaattgccaaggttgcatgag
gtcttgtgggagttggaaacctcccgtctggttgcccacatagagaaatccatgcaagaa
gaagctggagaagatgatgagttgtttatagtgaatgagaatggagacacacagctgtct
ggttacgtgggcccggattttgagaataacctgcgagtgccccttatagaaatactgaaa
tacccatatctgctgctgcatgagaaaatcgctgagctgtgtgtggaagtgctctgtaga
atggaacaaagtcacagctcctttcaggtctttgagaaatacccaggaatttatctcttt
ctggtacacccaaatgaagtgattcgtcgatgggccatcctaacagcaaggaatttaggg
aaggttgacagggatgattactatgacttacaggaagtactgacttgcttgttcaaagtt
attgagttggggctttttgagaggccagatatttacagcttttcagtggttgaaaagggt
aaactgatccttctgccatctcatttatatgatactgccaactacaagaactattggcta
gggatttgtatgctgctaacagtgttggaagaacaagctatggactccttgttactgggc
ccagacaaacaaaatgatttcatgcagtgtatacttcacaccatggagaaagaagcagct
gatgattctactgaccccttctggcctgcgctgcattgtttcatggttattttggatcag
ctcggatctaaagtatggggtcagcttattgatcctgtccaagcctttcaaaccattatc
aacagtgtgagctacaacaatgaaataaaaaatatacgcagtagctttaagaggacaaaa
tctgaaccggagtcagactacaatgatgacatggttacttgcagtcagattgtgtataat
tataacacagaaaagcctcaaaaggatactggatggaagactgccatttgtccagactac
tgccccaacatgtatgaagatatgcaaacactggctaatgtgcttcagtctgatattggc
agcgagatgcgtgtccatcacagcacatttctctggttcatcccttttgttcagtcactt
atggatctcaaggacttgggtgtagcatatatagtagaggtcattcactacctctgcttg
gaaatcagaggtattctcaatgaaagaatccagcagtgtgacaaaatctctgaatttttt
ctcctgatcttggtatcgattatcgaactacacagaaataaaaagtgcctacatttgcta
tggattagctcccaagaatgggtagaagcagtggtgagatgtgctaagcttccagctata
gcatttacacggtgcactgaaaaagcatctggacaatatgtgagaggttcatcagcagta
tctttacaagcttctaattctgtacagcatgcctgtgtcctgttgatacgtagccttctt
aaagaaggctatcaaattgggcagcatgctctttgcaagcaatacctggacaaactcaat
cttcttctgagaggaaatctatccttaggttggcagctgaacatccaggaaacccaggaa
ttacaaatgtgtttaaagcaagttacaagaagtatgaaggacagacagttgaatacctct
gtgcctgtaggaaacaatgcaaactctaaaactttgcctaccatttctgtaaagcaagag
aagagtgcacatgatggtggatgtgaggcgagtatacatggcagagatgacctctgttca
ccacttgctgccatatcaaaggaagatggagatgaagattatcagaatttcttccctgga
agaaagactgcatgggaagaggaatgtagagatgcaactgaaagttcaagatcttggaca
tccacagatgtgaatattaaaaaggaacttaatgacttgacaacttgggaatatggctgc
ccacagaactctttgtcaacaaaagtatatgggaaaattcaggaaaatagaagcaatgat
cttgtgacagtgaagtgtgatacagataatccatgctttaatccaaatgcccagcattca
gatttcagaagaggtggagagttagaaagcaaatgtgaagcaggaaccataacaccaatg
caactggctgctcaaacttgtataggttctccaaaacatgtttatagctcagatgtaaag
gaaaggaatatgtctcccagttcctcttcgaagtttaaagtagatgtgcgtagactcgtg
aatttgaaaagcaaggtacagaaaatcaaatggtcgtcaaaagtattgcaaccacgcaac
ttgaaaaactacagtttagcaacaagtgcttcaaaagcagagatagagcaatctaagttt
tgcactggctgtctgtgtacaagcaaagattgtcataagcatcaaggagtgaatactgtg
tgtgagaaggaaaactctgttggtacttcatcttcaaggagttgtgaaggtatgcaggag
aaaaataccaacagtggttttcagtccagactgacccccactaaacaggtatcagaagaa
acaccactagattgctctagctcttctacaaatgaacctggtacggaggaaaatgaagat
ggcagtattttgctttcaggtagtagtgacaccttattgaaaaaggtatccactgaagaa
aaatcatgttcagtattgaagtctgtgtttaagacagacactgacatgcaaacttcagac
caggatcagcctcatttaaatgatttggttaagtatgactgtaaaggtgaaatttcaaag
acattttgtatggataaaactttagcaaaaggttgtgttccatctagctctgaaaacaag
agggttatatccaaccctgcttctcagatcaggccgctgttgatgaagtgtgaatcaagt
gacaggttgtttgaattttcaaaatatttcaagagagagaacaattcagtggggaggaac
aaggaggattatgtgaagatggcttctgaagataatattttaacggactcccaggttgat
agagaactcagtaaattatctttaactgcatatgccaaaagtgtcaattttccctttgat
tcaagccaagaaagctcagtgcaccatgatgtgtgtgatattaaaaggaaggtgaaaggt
gctgtaagatcttccagtgatggtcaaagtaccgtgtctccctgtgatgcagattgcctt
gacaatcaagtcattgtaatttcagactcttctgatgaagaagaaggtgtggctgacaag
gaggcatcaaaagaaaagaatgaaagtgtgtgtcctgaagagcaaccttcaatctctagc
tgtatttctgatagtggtaacaaaatagaatcaaagactccaaactctccaagctctcca
ttgttactggaagactgtgagtctcagtactttgaatttgaaacagaagatgatgtcttt
tcggtttggcaagatactcaagagaatagtatggaagcaactccagagcatatgcaacat
gatgtttcaacagcagttgataatagtaattcagatggcttactgaacgatcacacaaat
gaatggggttatgatgtggattacataagtgatgataccatggaagaagaagcaaactta
gcagaaaagcaggtagaaaatatttctcatcagaaggaaactgataataaagaagtagta
actaattcaacattgcaggaatctattagtaagggaaattcaaaagatcaactggagaat
tttgcagacaaaggttctgttgctaaaggcttcaccctggattcaaaattgactgagccc
agagcatctacgtctaacatctcattagcttcaaagctggcccttaagaaaaagagcatg
agtccacggaagagaatagcaaaatctgagatagcaagaactattcaaagaagtcctaaa
aaacctcctgtccttaaaacagcacaaaataaaaagctacttcaaatcacatcaaaaaat
tctcaacctggtaggttaatgcctgctgtggttcccccaaggaaggttcggcagtgtcct
gtaccagcatcaactgtagaaaaacttggtctgaagaaagcaccccgcaaagcatttgaa
ttatcccagcgctctttagagagtctagctcaattgcgcagctatggtaaagctgcaggg
cgagttggagttgtacagaaaaagaagactaaactaattgctcctcagagtttgtctgta
aagtataataaaaagttgctagcctgtcaagaccgtcagtttttaaggcagacaaggccc
cagaaaagtgtcagagtgaaaaatactgcaggaagttctgagagtagaaataaaaaagtt
agcaaagtggatacaaaatctatgaaacaaaagcctaaaagttttgaactggcatctgtt
gaaggatctgtcgaaaaaaaaagggaggagactgtttgtccttctgccagtgagagaaaa
tttgaaaacctctctgtggaggaggagacatgtatctctaaaatgccttgttcttcagac
tcgaacagaaaatcggaagataacagtatgatggttcctcctgtatctagggattcaagt
ctctctgcgtttgttggagatgataaagatgaaccttcaggaaaaggcttcattgtccag
cctgagtgtgagaagacagcttcaaaagaaaatggatgtaaaccaaatgaaaacactgaa
gatgatgatgatttatttttaactcagttagatcctgtggatatggaattatgttctgaa
gaggaaggtgttcaagatactactatcgctggtaaaaatccagaggaagtggatactgct
gaaagtcttcagcagaatgaatcttcgactattgtgaaatgtaaatacaaagactgtatg
gaaaaagtggaaaaaccagcagtgtactgtagtaagcatccaggcaccagctcggaagca
gatcacttgtttgccaaaccttctctcctgccacctaaaatgaaaaagccttccactacc
aaaattttcagctcagcaagttcttcacggaatgcagccttcagcaaggatcttgaagat
gttaaaaagctacctccagcttcaaaaagcaaagtgaatgcagcaaaactggtggtggtc
aggccaccaaatgccagggctataccaatacgaaatcaaacatgcaaatttccaagtttc
agtaacgtacctcaaccccatatttctaacaacgttctccagccacaaaatggacagaac
aacaatgcttcaaatatttccagaaggcctgcccaggaagactattcttccttcgttggt
gctcagcaacgtgaccatagtatttttgttaatgaagttctacagtggacttatgaaatg
tttgccaactccagccaatttggacctccaattaatctcctgcattctgtagtagcctct
gttccagtccaatttcagggatacaatgagtattttaatacatttttccccttgatgatg
ctaaatgcctttgaaacgctagcacaagagtggatagaaaaccagagagtaagagagaag
agttactacttctacttacagaacttctgtgctgatatgaatacagcagattttacagct
catcttcaggaaagtgatttagcaaggcagcttcatccaaaggaggatgacttaatcttt
tttgtggtccaaaagaaaaaagacaccttcaaggaagaaagtgagatggagaaccatata
gtgaatcacgttggtcttgtgaagcgattttctcgtgcgtctggctgtttaactagacaa
aaggagcagcgtactgtctgtcatctttctgtgcaaactcgaggcaatttgtcattcttc
ataaataagcaagtgaagtgtgtggtggttggctccctggtgaccacacaccgaacattc
aaaggtttactactactgaacaggaatttcttgtctaaacccatcatatatccaaagtac
agtgacttctgtcccagagatttgccagcagcttcagaaagcactgcactgaatatgaat
gaatacaatgaagatcaaaagagagccattgagacagcttatgccatggtaaagcaacat
ccagagcttcccaagatctgcctcatccacggaccacctggaacagggaaatcaaaaact
attgttggacttctgtctcgtgttttgagagaaaacactaggaatgaaaagacaactcaa
aaaacaaattccaagatcaagctaaaccgttttctagtttgtgcaccatcaaatgctgct
gttgatgaactcatgaagaagatcattgttacatttaaggaaaaatgccaaaacaagcag
gagcctttgggaaattgtggtgatatcaaattagtgcgacttggtgctgaaaaagcaatc
aacagtgaagtgcggggatttagcctggataagcaagttgaacatagaatgaaacgaaag
ccagctgactgtgaccaggatattcagaagaaaaaagcagcactggatcaaaagctggac
atgctgtctcgtcagcgtgccatgcacagatgtgagaagagggaggtaagtcaaatttta
gatgatgaaattggcagactttcaaaggagagacaacagcttgcttctcagctaaaggag
gttcgggtgcattctcagaaagtacaggcagatatcatcttggagtcggacatcatctgc
tgcacactgagcacaagtggaggaagtctgctggaatctgctttttggcggcaaagactt
gttcctttcagctgtgtcattgtggatgaggcagggcagtcctgtgaggttgaaacactg
attccactggtgcatcgctgtactaagcttgtccttgttggagatcccagacagctccct
cctactgtaaaatcaataaaagctcaggaatatggctacggccagtccctgatggcacgc
ctgcacacgcacctggagcagcaagtgcagagcaatgttctacgaagcctgccggttgtg
cagctgactgtgcagtacaggatgcaccctgacatctgcctcttcccatccaattatgtt
tatggcgggactctaaaaactgacaaagcaacagaagagaacagatgttcttcagagtgg
ccattccagccctaccttatttttgacgtaggagacggtcgcgaggagcgagacaatgac
tcttttagtaatcctcaggaagtgaagctggtgatggaattgattagaacaattaaagaa
aaaaggaaggatctcggagttcgtcgcattggaataattactccctacagtgcacagaaa
aagaaaattcaagaacaactggacagagtatttaggaataatagcccaggagaagtggac
acagtggatgcatttcagggacgagagaaagactgcatcatagtgacatgtgtccgggca
aacagcactaaagggtcaattgggtttctggcaagtcttcagcgtctgaacgttacgata
acccgagccagattcagcctcttcattcttggaagactgaaaacgcttatgcagccagag
tgcctattgctgttttgcaagtga
DBGET
integrated database retrieval system
