KEGG   Tyto alba (Barn owl): 104364198
Entry
104364198         CDS       T07816                                 
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
tala  Tyto alba (Barn owl)
Pathway
tala03440  Homologous recombination
tala03450  Non-homologous end-joining
tala04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:tala00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    104364198 (RAD50)
   03450 Non-homologous end-joining
    104364198 (RAD50)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    104364198 (RAD50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tala03032]
    104364198 (RAD50)
   03400 DNA repair and recombination proteins [BR:tala03400]
    104364198 (RAD50)
DNA replication proteins [BR:tala03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    104364198 (RAD50)
DNA repair and recombination proteins [BR:tala03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     104364198 (RAD50)
    BRCA1-C complex
     104364198 (RAD50)
   NHEJ (non-homologous end-joining)
    MRX complex
     104364198 (RAD50)
SSDB
Motif
Pfam: AAA_23 SMC_N Rad50_zn_hook AAA_21 AAA_15 SbcC_Walker_B NPV_P10 AAA_29 DUF2703 AAA_24
Other DBs
NCBI-GeneID: 104364198
NCBI-ProteinID: XP_032862144
LinkDB
Position
Unknown
AA seq 1312 aa
MSKIEKMSILGVRSFGVEDKDKQIITFLNPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNSFVHDPKVAHETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKTEFKTLEAVITR
TKNGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQDHLSNREAQLAASKEN
VKSIESQLDPLKSSLAAVEQNLIKVMRLDNDVKALESRRRQMEKDNQDLQQKMEKVFQGT
DEQLRDRYQNHQRTVKEKEKRLSDCKRELDRTTKECQRFNSEKSELLIERGRLQLQADRH
QEHITTRDSLIQSLAAQLELDGFERAPFSERHITSFHRLLKERQDRDTEAANHLMREFAR
KEAMKQKQIDEIRDKKTGLERTIDLKSDIQNKKQVELKNVKYELQQLEGFSDRILELDQE
IGKTEHELEKAERNSNVETLELEVRTLQNEKINLDKALRKLDQEMEQLNLHTTTITQMEM
LKKDKAEKEEQVRKVKSRHSDELTSLLGYFPNKKQLEDWLHGKNRKINQTRDNLADLNKR
LASVEYHKTYVSDELRKKEAQLSLHEAKLFDVCGSQDFDSDLNKLQDEIEKSSKQRAVLA
GATAVYSQFVTQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESDLK
RKEKKRDEMMSLKPLRRTVVELQDREIPDLRNKVQNANRDLTGLKGEIEEQESLLQMDLS
EEDGAKACLQDITLMERYQTDIRDVERKIAQQEAKLLGVDLSRTVLQVSHEKQEKKHLWD
TVTGKIELKQKLKQDQQNQIQQLKSTVNDLKAEKLQISSSMQRRRQLEEQTVELTTEVQS
LCREIKESKEQVFPLDATLEKLQQEKEDLINTRTASNKETQEKINGIKEKVKDINKYVKE
IENYIQQGKDDYKKQKESELDEVSSRLAACEKQKEKISKEMEMIRQDIDTQKIQERWLED
NLTLRKRNEELKEVEDNIKQLVKEMGEMKVPQMKNEQKHLEEKIESLKRNHHVALGRQRG
FEEEIVRFKKELRESQFKDAEEKYRDMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIEYVEIRSDADENISASDKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQCSEIVKCSVSSLGSYVH
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgtcgaagattgagaaaatgagtatcctcggagtcaggagttttggggtagaagataag
gacaaacaaattatcactttccttaatccactgactattttggtgggaccaaatggtgca
ggaaaaacgactatcattgaatgtcttaaatatatatccactggagattttcctcctggc
accaaaggaaactcatttgttcacgatccaaaggttgcccatgaaacagatgttagagct
cagattcgactgcagttccgagatgtaaatggagagctcgtagctgtccagcgatccatg
gtctgtacccagaaaggcaagaaaacagaatttaaaacacttgaagctgtcattacgaga
acaaagaatggggagaaggtcagtctgagttccaagtgtgcagagattgatcgagagatg
atcagcgcccttggtgtttccaaatcggtgattaacaatgtcattttctgccaccaagaa
gaatccaactggccattaagtgaaggaaaggccctgaaacaaaaatttgatgagatcttt
tcagcaacaaggtatattaaggcactcgaaactctccgtcaagtacgactgaaacaaagc
ttgaaagtaaaagagtgtcagacagaactgaaatacctaaaacagaataaagagaaagca
caggaaatccaggatcatcttagcaacagagaggctcaactggctgcttctaaggagaac
gtaaaatctattgagagccaacttgatcctctaaagagttctctggcagcagttgaacag
aatctcataaaagtaatgaggctagacaatgatgtaaaagccctggagagcaggaggagg
cagatggagaaagataatcaagatctgcaacagaagatggaaaaggtttttcaaggaaca
gatgaacagctacgggataggtaccagaaccaccagagaacagtgaaggagaaggagaag
agattatcagactgtaagcgtgaattagatagaaccactaaagaatgccagagatttaac
agtgagaaatcagaactacttattgaacgaggtcgtcttcaactgcaagcagatcgtcac
caagaacacatcacaacaagggattcgttaattcagtctttggcagcacagctggaatta
gatggctttgagcgagcaccttttagtgaaaggcacattaccagttttcacaggttgttg
aaggagagacaggatagagatacagaagctgcaaatcatttgatgagagaatttgcacga
aaggaagcaatgaaacaaaaacagatagatgaaataagagacaagaaaactggattagaa
agaaccattgacctgaaatcagacattcaaaataagaaacaagttgagctgaagaatgta
aaatatgaattgcagcagttggaggggttttcagacagaattctggagttggatcaggag
attggcaagacagaacatgagctggagaaggctgagaggaacagcaatgtagaaacactc
gaactggaagtaagaactctgcaaaatgagaaaataaacctggacaaagctcttaggaag
ttggatcaagagatggaacagttgaatctacataccacaacaattacccaaatggagatg
ctgaagaaagacaaagccgaaaaagaagagcaggttagaaaagtaaaatcaagacattct
gatgagctgacatcactgttgggatactttccaaataaaaaacaacttgaagactggctt
catggtaaaaatagaaagatcaatcagacaagggataatcttgctgaccttaacaaacga
ctggcgtcagtagaatatcataaaacttacgtcagtgatgagctaagaaaaaaagaagcg
caattgtcccttcatgaagcgaaactttttgatgtttgtggaagccaagattttgacagt
gacctgaacaaacttcaagatgaaattgaaaaaagttcaaaacagcgagctgtgcttgct
ggagccactgcagtttattcacagtttgttacacagctgacagaggagaaccagtcgtgt
tgtccagtttgtcaaagagtttttcaaacggaggctgaactgcaagatgtaattagtgat
ctgcagtctaagctgcgtcttgctccagacaaactgaagtcaacagagtctgaccttaaa
agaaaagagaaaaaacgtgatgaaatgatgagtcttaaaccacttaggcgaactgtagtt
gaactgcaagatagggagataccagacttgaggaacaaggtacagaatgcaaacagggat
ttaacaggcctgaagggagagatagaggaacaggaatcactcttgcagatggatttgtct
gaggaggatggtgccaaggcatgtttacaggatataacactaatggaaaggtaccagact
gatattagggatgtggaacgaaaaattgctcagcaggaggctaagctgctaggggttgat
ttgagtagaactgttctacaagtaagccatgaaaaacaagagaaaaaacacttgtgggat
acagttactggtaaaattgagttaaagcaaaaactcaagcaagaccagcaaaatcagatt
cagcagctgaagagtacagttaatgatcttaaagcagagaaacttcagatttccagcagc
atgcagcgtcgtcgacaactggaggaacagacagtggaattaaccactgaagttcagtcc
ttatgcagagagatcaaggagtcaaaagaacaggtatttcctttggatgcaactttagaa
aaactgcagcaggagaaggaggatctaattaatacaaggactgcaagtaataaagaaaca
caagagaagataaatggcataaaagagaaagttaaagatataaacaagtacgtgaaagaa
attgaaaactatattcaacaaggaaaagatgactataaaaagcaaaaggagtctgaactt
gatgaagtaagttctcggttagctgcctgtgagaagcagaaggaaaagataagtaaagag
atggaaatgattcggcaagatattgacactcaaaagatacaggaaaggtggctagaggat
aatcttactttgaggaaacggaatgaagagctgaaagaagttgaagacaatataaaacaa
cttgtgaaggagatgggagaaatgaaagtcccacaaatgaaaaatgaacagaaacattta
gaggagaaaatagaatctttgaaaagaaaccaccatgttgcacttggccgacaacgtgga
tttgaggaggagattgttcggtttaaaaaggaacttcgagagtcacaattcaaagatgca
gaggaaaagtacagggatatgatgattgtaatgagaacaacagagctagtgaacaaagat
ctggacctttattacaaggctcttgataaagcaataatgacatttcacagcatgaagatg
gaagaaatcaacaaaataattcgtgacctttggcgaagcacctacagaggacaagatatt
gaatatgtagaaattcgttctgatgcagatgagaatatctcggcctccgataaaagaaga
agttacaattacagagtagtaatgataaagggagatacagcactggatatgcgaggaaga
tgtagtgctggccaaaaggtgcttgcttctcttattattcgtcttgctctagcagaaaca
ttctgtctcaactgtggcatcttggcactagatgagcctactaccaatcttgatcgagaa
aacatagagtctcttgcacacgccctggtggagataataaaaagccgctcacaacagcgt
aactttcagcttctggtgataactcatgatgaagattttgttgaacttctgggccgttct
gaatatgtggaaacgttctatcggataaagaagaacattgaccagtgctctgagattgtg
aaatgcagtgtcagctccctaggctcctacgttcattag

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