Tyto alba (Barn owl): 104364410
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Entry
104364410 CDS
T07816
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104364410 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tala03021
]
104364410 (SF3B3)
03041 Spliceosome [BR:
tala03041
]
104364410 (SF3B3)
03036 Chromosome and associated proteins [BR:
tala03036
]
104364410 (SF3B3)
Transcription machinery [BR:
tala03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104364410 (SF3B3)
Spliceosome [BR:
tala03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
104364410 (SF3B3)
Complex B
104364410 (SF3B3)
Complex C
U2 SnRNP specific factors
104364410 (SF3B3)
Chromosome and associated proteins [BR:
tala03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
104364410 (SF3B3)
TFTC complex
104364410 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
104364410
NCBI-ProteinID:
XP_042653430
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctacaacctgacgttgcagcgtgccaccggcattagctatgctatccatggc
aatttctcaggaaccaaacaacaagaaattgttgtttcccgaggcaagatcctggagtta
ctccgacctgatcccaacacggggaaggttcacaccctgctgaccgtggaagtgttcgga
gtcattcgttccctcatggcctttaggctgacaggtgggaccaaagactatatcgtcgta
ggcagcgattcaggacgcatcgttattctggagtaccagccctcaaagaatgtgtttgag
aagattcatcaggaaacctttggcaagagtggatgtcgcagaattgttccaggccagtac
ttggctgtagacccaaagggccgtgccgtcatgatcagtgctattgaaaaacagaagctg
gtatatattttgaacagagatgctgctgctcggctcaccatttcctccccgctggaagcc
cacaaggccaataccttggtctaccacgtggtgggagtcgatgtgggatttgaaaaccca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacaggagaagca
gcagccaacacacaacagacgctgacattttatgaactggacttgggtttgaaccatgtt
gttaggaaatacagtgagcccttggaagagcatggcaacttccttataacagttcccgga
ggttctgatggacccagtggggtgctgatctgttctgaaaactacattacctataaaaac
tttggtgaccagcctgatatcagatgcccaattcccaggagacggaatgacttggatgac
ccagagagaggcatgatttttgtctgctctgctacacataagaccaagtccatgttcttc
ttcctggcccagacagagcagggagacatcttcaaaattactctggagactgatgaagac
atggtaacagagattcgactgaagtactttgacactgttcctgttgctgctgccatgtgt
gtgctgaagacagggtttctctttgtggcatctgaatttggaaaccattacctgtaccag
attgctcacctgggtgatgatgatgaggagccagagttctcttctgccatgcctcttgag
gaaggagatacattcttttttcagccacgacctctcaagaacctggtgctggtggacgag
ttggacagtttgtctcctattctttgttgtcagatagcagatttggctaatgaagacaca
cctcagttgtatgtggcttgtggtcgggggccccggtcatctctgagggttctaagacat
ggacttgaggtgtctgaaatggccgtctcagagctgcctggtaaccccaatgctgtatgg
actgtgaggagacatgttgaagatgaatttgatgcctatatcattgtgtccttcgtaaat
gccacactggtgctgtctattggagagactgtagaagaagtgactgactctggattcctg
ggaactacacccaccctgtcctgctctcttcttggtgatgatgctttggtacaggtttat
ccagatgggatccggcacatccgagcagataagagagtaaatgaatggaagacaccaggg
aagaagactattgtaaaatgtgctgtgaaccagagacaagtagtgatagcactgactgga
ggagaactggtttactttgagatggacccgtcggggcagctgaatgagtacacagagaga
aaagagatgtcggctgacgttgtttgcatgagcctggccaatgttccccctggggagcag
cgctcccggttccttgctgttgggctggtggacaacactgtcagaattatttctcttgac
ccttcggattgcttacagccgctgagtatgcaggccctccctgcacagcccgagtcgctg
tgcatcgtggagatgggtggcacagagaagcaggacgagctaggggagaggggctccatt
ggctttctgtacctgaacattggactgcagaatggtgtgctgctgcgaactgtcctggat
cctgtcactggcgatctttccgataccaggaccaggtaccttggttcacggcctgtgaaa
ctcttccgggtccgaatgcaaggccaagaggcggtgctggccatgtcaagccgttcctgg
ctcagttactcctatcagtcacgcttccacctgactcccctgtcttatgagacgctggag
tttgcatctggttttgcttctgagcagtgcccggagggcattgtagccatctccacaaac
acattgaggattttggcactggagaagctgggggcagtcttcaaccaggttgccttcccg
ttgcagtacacgccccgaaaatttgtcattcacccagagagcaacaacctaatcatcatt
gagacagaccacaatgcttacactgaggccaccaaggcacagaggaagcagcaaatggcc
gaggaaatggtggaggctgcgggtgaagatgaaagggagttggctgcagagatggctgca
gcctttctgaacgagaatcttcccgagtccatctttggtgctcccaaggctgggaatgga
cagtgggcctctgttatcagggtgatgaaccccatccagggaaacacgttagatctggtt
cagctggagcagaacgaagctgccttcagcgtggctgtgtgccggttctccaacactggc
gatgagtggtacgtgctggtgggagtcgccaaggacctgattctgaacccgcgctcggtt
gctgggggatttgtctacacgtacaagctggtgaatagcggtgagaagctggagtttctg
cacaagacccctgtggaggaggttcctgcagccattgctccgttccaaggtagagtctta
attggtgttggaaagctcctgcgtgtatatgacctgggcaagaagaaactgctgcggaag
tgtgagaataagcacattgccaactacatctgtgggatccaaaccattgggcacagagtg
attgtttcagacgttcaggagagcttcatctgggtgcgctacaaaaggaatgagaaccag
ctcatcatctttgctgacgacacttatccccggtgggtcacgacagcaactctcctggat
tatgacactgtggctggagcagacaagttcggtaacatctgcgtggtgagattgcctccc
aacaccaatgatgaggtagatgaggatcccacaggcaacaaagctctctgggacagaggg
cttcttaatggagcgtcgcagaaggctgaagtgattatgaattatcacgtgggagagacg
gtgctttccttacagaagaccacgctgattccaggaggctccgaatctcttgtctatacc
accctatcaggagggataggaatcttggtcccctttacttcccacgaggatcacgacttc
ttccagcatgtggaaatgcacttaaggtctgagcaccctcccctctgtggacgagaccat
ctcagtttccgctcctactacttcccggtgaagaacgtgatcgatggggacctgtgtgag
cagttcaactccatggaacctaacaaacagaagaatgtggccgaagagctggaccggacc
ccacctgaggtgtccaagaagctggaagacatccgcacacgctacgctttctga
DBGET
integrated database retrieval system