KEGG   Tyto alba (Barn owl): 104364410
Entry
104364410         CDS       T07816                                 
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
tala  Tyto alba (Barn owl)
Pathway
tala03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tala00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104364410 (SF3B3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tala03021]
    104364410 (SF3B3)
   03041 Spliceosome [BR:tala03041]
    104364410 (SF3B3)
   03036 Chromosome and associated proteins [BR:tala03036]
    104364410 (SF3B3)
Transcription machinery [BR:tala03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     104364410 (SF3B3)
Spliceosome [BR:tala03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104364410 (SF3B3)
 Complex B
    104364410 (SF3B3)
 Complex C
   U2 SnRNP specific factors
    104364410 (SF3B3)
Chromosome and associated proteins [BR:tala03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     104364410 (SF3B3)
    TFTC complex
     104364410 (SF3B3)
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7
Other DBs
NCBI-GeneID: 104364410
NCBI-ProteinID: XP_042653430
LinkDB
Position
Unknown
AA seq 1217 aa
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgtttctctacaacctgacgttgcagcgtgccaccggcattagctatgctatccatggc
aatttctcaggaaccaaacaacaagaaattgttgtttcccgaggcaagatcctggagtta
ctccgacctgatcccaacacggggaaggttcacaccctgctgaccgtggaagtgttcgga
gtcattcgttccctcatggcctttaggctgacaggtgggaccaaagactatatcgtcgta
ggcagcgattcaggacgcatcgttattctggagtaccagccctcaaagaatgtgtttgag
aagattcatcaggaaacctttggcaagagtggatgtcgcagaattgttccaggccagtac
ttggctgtagacccaaagggccgtgccgtcatgatcagtgctattgaaaaacagaagctg
gtatatattttgaacagagatgctgctgctcggctcaccatttcctccccgctggaagcc
cacaaggccaataccttggtctaccacgtggtgggagtcgatgtgggatttgaaaaccca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacaggagaagca
gcagccaacacacaacagacgctgacattttatgaactggacttgggtttgaaccatgtt
gttaggaaatacagtgagcccttggaagagcatggcaacttccttataacagttcccgga
ggttctgatggacccagtggggtgctgatctgttctgaaaactacattacctataaaaac
tttggtgaccagcctgatatcagatgcccaattcccaggagacggaatgacttggatgac
ccagagagaggcatgatttttgtctgctctgctacacataagaccaagtccatgttcttc
ttcctggcccagacagagcagggagacatcttcaaaattactctggagactgatgaagac
atggtaacagagattcgactgaagtactttgacactgttcctgttgctgctgccatgtgt
gtgctgaagacagggtttctctttgtggcatctgaatttggaaaccattacctgtaccag
attgctcacctgggtgatgatgatgaggagccagagttctcttctgccatgcctcttgag
gaaggagatacattcttttttcagccacgacctctcaagaacctggtgctggtggacgag
ttggacagtttgtctcctattctttgttgtcagatagcagatttggctaatgaagacaca
cctcagttgtatgtggcttgtggtcgggggccccggtcatctctgagggttctaagacat
ggacttgaggtgtctgaaatggccgtctcagagctgcctggtaaccccaatgctgtatgg
actgtgaggagacatgttgaagatgaatttgatgcctatatcattgtgtccttcgtaaat
gccacactggtgctgtctattggagagactgtagaagaagtgactgactctggattcctg
ggaactacacccaccctgtcctgctctcttcttggtgatgatgctttggtacaggtttat
ccagatgggatccggcacatccgagcagataagagagtaaatgaatggaagacaccaggg
aagaagactattgtaaaatgtgctgtgaaccagagacaagtagtgatagcactgactgga
ggagaactggtttactttgagatggacccgtcggggcagctgaatgagtacacagagaga
aaagagatgtcggctgacgttgtttgcatgagcctggccaatgttccccctggggagcag
cgctcccggttccttgctgttgggctggtggacaacactgtcagaattatttctcttgac
ccttcggattgcttacagccgctgagtatgcaggccctccctgcacagcccgagtcgctg
tgcatcgtggagatgggtggcacagagaagcaggacgagctaggggagaggggctccatt
ggctttctgtacctgaacattggactgcagaatggtgtgctgctgcgaactgtcctggat
cctgtcactggcgatctttccgataccaggaccaggtaccttggttcacggcctgtgaaa
ctcttccgggtccgaatgcaaggccaagaggcggtgctggccatgtcaagccgttcctgg
ctcagttactcctatcagtcacgcttccacctgactcccctgtcttatgagacgctggag
tttgcatctggttttgcttctgagcagtgcccggagggcattgtagccatctccacaaac
acattgaggattttggcactggagaagctgggggcagtcttcaaccaggttgccttcccg
ttgcagtacacgccccgaaaatttgtcattcacccagagagcaacaacctaatcatcatt
gagacagaccacaatgcttacactgaggccaccaaggcacagaggaagcagcaaatggcc
gaggaaatggtggaggctgcgggtgaagatgaaagggagttggctgcagagatggctgca
gcctttctgaacgagaatcttcccgagtccatctttggtgctcccaaggctgggaatgga
cagtgggcctctgttatcagggtgatgaaccccatccagggaaacacgttagatctggtt
cagctggagcagaacgaagctgccttcagcgtggctgtgtgccggttctccaacactggc
gatgagtggtacgtgctggtgggagtcgccaaggacctgattctgaacccgcgctcggtt
gctgggggatttgtctacacgtacaagctggtgaatagcggtgagaagctggagtttctg
cacaagacccctgtggaggaggttcctgcagccattgctccgttccaaggtagagtctta
attggtgttggaaagctcctgcgtgtatatgacctgggcaagaagaaactgctgcggaag
tgtgagaataagcacattgccaactacatctgtgggatccaaaccattgggcacagagtg
attgtttcagacgttcaggagagcttcatctgggtgcgctacaaaaggaatgagaaccag
ctcatcatctttgctgacgacacttatccccggtgggtcacgacagcaactctcctggat
tatgacactgtggctggagcagacaagttcggtaacatctgcgtggtgagattgcctccc
aacaccaatgatgaggtagatgaggatcccacaggcaacaaagctctctgggacagaggg
cttcttaatggagcgtcgcagaaggctgaagtgattatgaattatcacgtgggagagacg
gtgctttccttacagaagaccacgctgattccaggaggctccgaatctcttgtctatacc
accctatcaggagggataggaatcttggtcccctttacttcccacgaggatcacgacttc
ttccagcatgtggaaatgcacttaaggtctgagcaccctcccctctgtggacgagaccat
ctcagtttccgctcctactacttcccggtgaagaacgtgatcgatggggacctgtgtgag
cagttcaactccatggaacctaacaaacagaagaatgtggccgaagagctggaccggacc
ccacctgaggtgtccaagaagctggaagacatccgcacacgctacgctttctga

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