Tyto alba (Barn owl): 104365294
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Entry
104365294 CDS
T07816
Symbol
VPS50
Name
(RefSeq) syndetin isoform X2
KO
K23288
syndetin
Organism
tala
Tyto alba (Barn owl)
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tala04131
]
104365294 (VPS50)
Membrane trafficking [BR:
tala04131
]
Protein recycling
Others
EARP complex
104365294 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
104365294
NCBI-ProteinID:
XP_032847552
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQESAHDLSPIESFRIPSKEELRELREEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYREKLKQQQAAVSKKVADLILEKQPAYVQELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQTSLSLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDISHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHEDHDQDKAAAVSSV
SDVSSVIGTEENSFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISTTVTLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSKKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTFESTGLGLSSSRLRTTLNRIQESLIDLVSADPTGTLTAAEERKEKVPSPHLSHLVVLT
SGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELRK
PVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEEFNRRLNEVSKRVR
IPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIP
DKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDD
IDRPKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgtcagggtctaagaagtcctcaagagagtgct
catgacctcagtcctattgaaagctttcggattcctagtaaggaggagctcagagaactg
cgtgaagaaccaactgatcctcaagctcagcaagaaataattaatagcattgaagaagtt
tatttttccaatgattcctttgatattgtgaagtatgagttagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagaaaaattaaaacaacagcaagctgctgtg
tctaagaaagttgcagacttgattcttgaaaaacagcctgcatatgttcaggaacttgaa
cgtgttacatcattgcagactggccttcagctagcagctgttatctgcacgaatggaaga
agacacctgaatatagcaaaggaaggcttcacgcaaactagtttgagtctccttgcaaat
caaaggaaacgacaattgcttattggactgctaaaatctctgagaacaataaaaacattg
caaagaactgatgtgcgtttgagtgagatgttggaggaagaggactatccaggagctatt
cagctgtgcttagaatgccaaaaagctgcaagcactttcaaacactacagttgtataagt
gagttgaattcaaaactgcaagacaccttggaacaaatagaggaacagttggacgtagcg
ctctccaaaatatgcaagaactttgatatcagtcattatacaaaggttcagcaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttcactcaagcc
attcacaacactgtgtttcaagtagtccttggatatgtggagctgtgtgcaggaaacaca
gacaccaagtttcagaagttacagtacaaagacctctgtacacatattacatcagacagc
tacattccatgccttgctgatctctgcaaagccctctgggaagtaatgctcagttactac
cgaacgatgcagtggcatgaggatcatgaccaagataaggcagcagctgtgtcttctgtt
tcagatgtcagcagtgtgattggaactgaagagaacagttttgaccgcagctatgtaaaa
aagaaattagaacatgggctttcacgaatatggcaggatgttcaactgaaagtgaaaaca
taccttctgggaacagatctgtctaacttcaaatatgatgacttcatatttgtacttgat
gttatcagcaggctgatgcaagtcggagaggaattttgtggcagtaagtctgaagtttta
caagaatccatcagaaaacaaagcgttaactatttcaaaacgtaccacagaacccgtctt
gaagaattaagaatgtttttggagaatgagacgtgggaactttgtcctgttaaatcgagc
tttagtattctgcagcttcatgaatttaagttcatggagcagtcacgttccccatctgtg
tcacctagtaagcagcctgcttcagcaatttcaacaacagtaacattatttgagcagtac
tgtaatggaggaaacccatttgaaatccaggccgacagcaaagatgatgagacagaagac
gtgttagcttccaatgggtatgaatcagatgaacaagaaaaaagtgcgtatcaagagtat
gatagcgacagtgatgtgcctgaagagttgaaaagagattatgtagatgagcagacagga
gatgcccccgtgaaaagtgtttctcgagaaactctgaggagcaaaaagagatcagattat
aacctcaataaagtgaatgcacctatcctaacaaacactacgctgaatgtaataaggctt
gttgggaaatacatgcagatgatgaatattctgaaaccaattgcatttgatgtgatccac
ttcatgtcccagctcttcgattactatctgtatgcagtctatacgttttttggccgaaat
gacacgtttgaatcaacaggactgggcctcagtagcagcagattacgcaccacactgaac
agaatccaggagagtctgattgatctagtctctgctgatcccacaggaactctcacagct
gctgaagagagaaaggagaaggtgccaagcccacatctcagtcatcttgtagttttgact
tctggcaattcgctgtatggtttggcagagagagtggtggccacggaatccttggtgttt
ctggctgagcagtttgagtttcttcagcctcatcttgatgcggtgatgccagctgccaag
aagccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactacgtaaa
ccagtttattggattgttgctgctaaagccattgattatgaacaaatgctgcttctcatg
gctaatgtgaaatgggatgtgaaggaaatcatgtcacaacacaatatatatgtagatgct
cttttaaaggaatttgaagaatttaacagaaggttgaatgaggtgtctaagagagttcgg
attccactgccagtctccaacatcctttgggagcactgcatacgcttggccaatagaact
cttgtggaaggttatgccaatgtaaagaagtgcagcaatgaaggacgtgccttgatgcaa
ctggactttcaacagttcttaatgaaactagaaaagttaacagacattaggcctattcca
gataaagaatttgtggagacctacattaaagcatactacctaacagaaaatgacatggaa
cgctggataaaggaacatagggaatattccactaagcagttgaccaatctggtgaatgtt
tgtctgggctcccacatcaacaaaaaggcaagacagaagctgctagctgctattgacgac
atagacaggcctaaaagataa
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