Tyto alba (Barn owl): 104365509
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Entry
104365509 CDS
T07816
Symbol
FN1
Name
(RefSeq) LOW QUALITY PROTEIN: fibronectin
KO
K05717
fibronectin 1
Organism
tala
Tyto alba (Barn owl)
Pathway
tala04510
Focal adhesion
tala04512
ECM-receptor interaction
tala04518
Integrin signaling
tala04810
Regulation of actin cytoskeleton
tala04820
Cytoskeleton in muscle cells
tala05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104365509 (FN1)
04518 Integrin signaling
104365509 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104365509 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104365509 (FN1)
04810 Regulation of actin cytoskeleton
104365509 (FN1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104365509 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tala04131
]
104365509 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tala04147
]
104365509 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
tala00536
]
104365509 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
tala04990
]
104365509 (FN1)
Membrane trafficking [BR:
tala04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
104365509 (FN1)
Exosome [BR:
tala04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
104365509 (FN1)
Glycosaminoglycan binding proteins [BR:
tala00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104365509 (FN1)
Domain-containing proteins not elsewhere classified [BR:
tala04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
104365509 (FN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Pur_ac_phosph_N
Fn3_Dep-1_2nd
fn2
Fn3_VIN3
Fn3_Dep-1_3rd
Interfer-bind
NDNF
FN3_Tor_3rd
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
104365509
NCBI-ProteinID:
XP_042664406
LinkDB
All DBs
Position
Unknown
AA seq
2487 aa
AA seq
DB search
MRGRTAWRLALLALCLGAAAAEGGGRGGGGGQRRGGKSRRQAQTTSVPQGTPAQSKQTCY
DNGRYYQINQQWERIYLGNTLVCTCYGGSRGFNCESKPEPEETCFDKYTGSTYRVGETYE
RPKDSMIWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNG
KGEWTCKPVAERCYDNTAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCND
HDTKTSYRIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHTSLHTTSTGSGSPSFTNVQT
ALYQPQPQQPQPQPYGQCITDNGVVYSVGMQWLKTQGSQQMLCTCLGNGVSCQEIAVTQT
YGGNSDGEACVLPFTYDGRTFYSCTTEGRTDGHLWCSTTSNFEQDRRYSFCTEQNVLVQT
RGGNSNGALCHFPFLYNNRNYTDCTSEGRRDNMKWCGTTENYDADQKFGFCPMAAHEEIC
TTNDGVMYRVGDQWDKQHDMGHMMRCTCVGNGRGEWTCIAYSQLRDQCIVDGITYDVNQT
FHKRHDEGHMLNCTCFGQGRGRWKCDPVDQCQDSETRTFYQIGDSWEKYVHGVRYQCYCY
GRGIGEWHCQPLQTYPGSTGPVQVIITESTNQPNSHPIQWNAPERSHITKYILRWRPKNS
GRQWKEATIPGYQNSYTISGLKPGVIYEGQLISVQRYGHKEVTRFDFTTTSTTAVTSNTV
SGETTLLPPVVATSESVTEITANSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPST
ATSVNIPDLLPGRKYIVNVYQISEEGEQNLILSTSQTTAPDAPPDHSVESVDDTSIVIRW
SRPQAPITGYRIIYTPSVEGSSTELNLPDTATSVTLSDLMPGVQYNISIYAVEENQESTP
VFIQQETTGVPRTDEVPSPKDLQFVEVSDIKITIMWTPPQSQVSGYRVEVIPVNRPGQHG
QRLPITRSSFAEVLDLLPGTTYLFKIFAVSHGRESKPLTGEQTTKLDAPTNLRFLNTTEH
SVLVLWTRPRAVITGYRLTAGPTRGGQPRTYNVGPSATKYLLRNLQPGTEYTVYLVAVKD
DLQSARETGVFTTYQPVGSVPPFNTEVTETSIVITWTPAPRIGFKLGVRPSQGGEAPREV
ISDSGSIVISGLTPGVEYTYSLTVLMDGQERETPIIRRVTTPLSPPTNLRLEPNPDTGVL
VVSWDRSTTPGISGYRVTTAPTNGQQGSTLEEVVGADQTTCTFENLNPGVEYNVSVYSVK
DDQESVPISETITQEVPQLTDLSFVDITDSSIGLRWTPLNASTIIGYRITVVAAGESVPI
FEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNVGP
DTMRVTWTAPTSIVLSSFLVRYSPVKKDEDVAELTISPSDNMVMLTNLLPGTEYLVRVYS
VSEQHESAPLSGIQKTGLDSPSGLDFSDITANSFTVHWIAPRATITGYKIRHHPEHGVGR
PKEDRVPPSRNSITLTNLLPGTEYVVSIIAVNGREESVPLVGQQTTVSDVPRDLEVTPTS
PTSLVISWDAPAVTVRYYRITYGETGGSSPVQEFTVPGTMSTATITGLKPGVDYTITVYA
VTGRGDSPASSKPVTVTYKTEIDTPSQMQVTDVQDNSISIRWLPSTSPVTGYRVTAVPKK
GHGPTKTKNVPADQTQVTIEGLQPTVEYMVSVYAQNQNGESLPLVETAVTNIDRPKGLTF
TEVDVDSIKIAWESPQGQVTRYRVTYSSPEDGIHELLPAPGGEEDTAELHGLRPGSEYTI
NIVAIYDDMESLPLTGTQSTAIPPPTNLKFTQVTPTSLTVNWNAPNVRLTGYRVRVNPKE
KTGPMKEINLSPDSTSAVVSGLMVATKYEVSVYALKDSLTSRPAQGVVTTLENVSPPRRA
RVTDATETTITITWRTKTETITGFQVDAVPASGQNPIQRTISPDVRTFTITGLQPGNDYK
IYLYTLNENARSSPVVIDASTAIDAPSNLRFLTTTSNSLLATWQPPRAKITGYIIRYEKP
GSPAKEVLPRPRPGTTEATITGLEPGTEYIIYIIAVKNNQKSEPLVGRKRTDELPTLITR
PHPNQPDILDVPSIDEGTPYLTNNRYDNGNGIQLPGTSGHPQTIGHQGQQVFFEEHGYRR
PVPTTATPLRPGSRRQPPNVDEAIEIPGYQVPIIVEPSYPHSRGPRRNDTTGQEALSQTT
ISWRPLLESSEYIISCQPVSQDEDTLQFRVPGTSSSATLTGLTRGATYNIIVEALKDHRR
QKVLEEVVTVGNTVSEGLNQPADDTCFDTYTGSFYSIGEEWERLSETGFKLWCQCLGFGS
GHFRCDSSKWCHDNGVNYKIGEKWDRQGENGQMMSCTCLGNGKGEFKCEPHETTCYDDGK
MYQVGEQWQKEYFGAICSCTCYGGQQGWRCDNCRRPSVEVAPEGSAGHTYTQFTQRYHQA
TNTNVNCPIECFMPLDVQADTQHPRGK
NT seq
7464 nt
NT seq
+upstream
nt +downstream
nt
atgcggggccgcaccgcgtggcggctggcgctgctcgctctctgcctgggggctgcagcg
gcggaggggggggggcggggcggcggcggggggcagcgccgcggaggcaagagccggcgg
caagcgcaaaccacctcggtacctcagggcacccccgcgcagagcaagcagacctgttat
gacaacggaagatactatcagataaatcagcagtgggagcgcatttacctgggaaacacg
ctggtctgtacctgctatggtggaagcagagggtttaactgcgaaagcaagcctgaacct
gaagaaacttgttttgacaaatacactggatccacttaccgagtaggggagacttatgag
cgccccaaggactccatgatctgggactgtacttgcattggagctggacgtgggagaatc
agctgcactattgccaatcgctgccatgagggtggccagtcctacaagattggcgatacc
tggcgccggccccatgagacgggtggctacatgctggagtgcgtatgcctgggcaacggg
aagggcgagtggacctgcaagcctgtggctgagcgatgctatgacaacacggctgggacg
tcctacgttgtgggtgagacctgggagaagccctaccagggctggatgatggtggactgc
acctgcctcggggagggcagcggccgcatcacctgcacctccagaaataggtgcaatgac
catgacaccaagacttcctacagaattggagacacctggagcaagaaggataaccgtgga
aacttgcttcagtgcatctgtactggtaatggcagaggtgaatggaaatgtgaaaggcac
acatcactgcatacgactagcactggatctggctctcctagcttcacaaatgtacagact
gcgttgtaccagccccagcctcaacagccccagcctcagccgtatggccagtgcataact
gacaatggagtggtgtactccgtgggcatgcagtggctcaagacacagggcagccaacaa
atgctttgtacctgcctgggcaatggagtcagctgccaggaaatagctgtgacccaaaca
tacggtggcaattctgatggagaagcctgtgttctgcctttcacctatgacggaaggact
ttctattcctgcaccactgaaggccgcacagatgggcacctgtggtgcagcaccacttcc
aactttgagcaagacaggagatactccttctgtaccgagcagaatgttttggtccagaca
cgtggtggcaattccaatggtgctctgtgccacttccccttcctgtacaacaaccgcaac
tacactgactgtacttctgagggacggagagacaacatgaagtggtgtggaaccactgag
aactatgacgctgaccagaaatttggtttctgccctatggctgcccatgaagaaatctgc
acaaccaatgatggtgtcatgtaccgcgttggggaccagtgggataaacaacatgacatg
ggccatatgatgagatgtacttgtgtaggaaatggccgcggagaatggacttgcattgca
tattcccagctcagagaccagtgcattgtggacggtatcacctatgatgtgaaccagacc
ttccacaagcgtcatgatgaggggcacatgctgaactgcacatgctttggccagggccgg
gggagatggaaatgtgatcctgttgatcagtgccaggattcagaaacccgtaccttttac
caaatcggagattcgtgggagaagtatgtccatggagtcagataccagtgctattgctat
ggtcgtggtattggagaatggcattgccagcctctgcagacctatcctgggtcaacgggg
cctgttcaggtgatcatcacagagagtacaaaccagccaaactcccaccctatccagtgg
aatgctcctgaacgatctcacatcaccaagtacatcttgcgttggagaccgaaaaactct
ggaaggcagtggaaggaagccaccatccccggctaccagaattcctacaccatctcaggc
ctgaagcctggtgtgatatatgaaggacagctcatcagcgttcagcggtatggtcacaaa
gaagtcacccgctttgactttaccacaaccagcaccacagcagtgacaagcaacactgtt
tcaggagagacaactcttcttcctcccgtggttgctacttcagagtcagtcactgaaatt
acagccaacagctttgttgtctcctgggtttctgcttctgacacagtttctggattccgt
gttgagtatgagctgagcgaggagggtgatgagccacagtatcttgatcttccaagcaca
gccacttctgtcaacatccctgacttgcttcctggtcgcaagtatattgttaatgtctat
cagatctctgaagaaggagagcagaatctgatcctgtctacttcacagactacagctcct
gatgcacctcctgatcattctgtggaaagtgtagatgacacatcaattgtcattcgctgg
agcagaccacaggctcccatcacaggctacagaattatctatacaccctccgtggaaggc
agcagcacagagctcaacctgcctgacactgcaacctctgtaacactcagtgacttgatg
ccaggtgttcagtacaacatcagcatctacgcagtggaagaaaatcaggaaagtactcct
gtcttcatccaacaggaaaccacaggcgtcccgcgcacagatgaagttccttcacccaaa
gacctgcagtttgtggaggtttctgacatcaagatcaccatcatgtggaccccaccgcag
agccaagtgtctggctatcgagtggaagtgatccctgtcaatcgccctggccaacacggc
cagagactgcctatcaccaggagctcttttgctgaagttcttgacctgctcccaggaaca
acctatctctttaagatctttgccgtgagccacggcagggagagcaaacctttgactgga
gagcaaaccaccaagctcgatgcccctaccaacctgagattcctcaatactacggagcat
tcagtgttagtgttgtggacgcggccccgtgctgtgatcacaggataccggctgactgca
ggtcccacaagaggaggacaaccaaggacctacaatgtgggaccttctgccaccaagtac
cttctcagaaacttgcagcctggcactgagtacacagtgtaccttgtggcagttaaagac
gacttgcaaagcgccagagagactggagtcttcacaacttatcagcctgttggctctgtt
cctccttttaacacagaagtgactgagacttctattgtcatcacctggacacctgcccca
aggattggtttcaagctgggcgtgcgcccaagccaaggcggagaggctccccgggaggtc
atctctgattctggcagcatcgtgatatctggcctgacccctggagtggagtacacctac
agccttacagtcctgatggacggccaggagagagagactcccatcatcaggagagtgact
acaccattgtctccaccaaccaacctgcgcctggagcccaatcctgataccggggtcctg
gtagtctcttgggatagaagcacaacaccaggcatcagtgggtaccgagtgaccactgct
cctaccaatgggcaacagggctctaccttggaggaagtagtaggtgcagatcagaccacc
tgcacctttgaaaacctaaaccccggtgtggagtacaatgtcagcgtttactcagtcaag
gatgaccaggagagtgtccccatctctgaaaccatcacacaagaggtgccccaactcact
gacctaagctttgttgacataactgactcaagcatcggcctgaggtggaccccgttaaat
gcctccaccattattggttaccgcatcacagtagttgcggcaggagaaagtgtccctatt
tttgaagattttgtggactcctcggtaggatactacacagtcacaggcttggagccgggc
attgattacgacatcagtgtaatcacactcattaatggcggagagagcgcccctaccact
ctgacacagcaaacggctgtgcctcctcccactgatctccgcttcactaatgtggggcct
gacaccatgagggtgacttggaccgcaccaacttccatcgtgctgagcagtttcctggtg
cgctactcacctgtgaagaaggatgaggatgttgcagagctgacaatttcaccctcagac
aacatggtgatgttaacaaatctgctccctggtactgaatatctggtgagagtctacagt
gtttctgagcaacatgagagtgcgcctttgtctggaatccagaaaacaggccttgattcc
cccagtggccttgacttctcggatataactgctaactctttcaccgtccactggattgct
cctcgtgccaccatcacgggctacaaaatccggcatcacccagagcatggcgttggcagg
cccaaggaggaccgtgtgcccccctcacggaactccatcacccttaccaacctgcttcca
gggactgagtacgtggtcagcatcatcgccgtcaacggcagggaggagagcgtgcccctg
gtcggccaacaaacaacggtttctgatgttccaagggacttggaagtgacccccaccagc
ccaaccagccttgtgatttcctgggatgctcctgcagtgacagtcagatactaccggatc
acttacggtgaaacaggtggaagcagccccgtgcaggagttcacagtgcctggcaccatg
tctactgctaccatcactggcctcaaacctggcgtagactacaccatcactgtgtatgct
gtaactggccgtggagacagccctgccagtagcaagccagtcactgtcacctacaaaaca
gaaatagacacaccatcacagatgcaagttactgacgtccaggacaacagtatcagcatc
cgatggctcccttcaacatccccggtcacgggctatcgcgtgacagctgtccccaagaaa
ggacacgggcccacaaaaactaaaaacgtccctgcagatcaaacgcaagtcactatcgaa
ggtctgcagcccacagttgagtatatggtcagtgtctatgctcagaaccagaacggagag
agcctccccttggttgagacagctgtcaccaacattgaccgccctaaaggactaacattc
actgaggtggatgttgattccatcaaaattgcttgggaaagcccgcaggggcaagtcacc
aggtacagggtgacctactcaagccctgaggatggaatccatgagctattgccggcccca
ggtggcgaagaagacactgctgagctgcatggcctcaggccaggttctgagtacactatc
aatatcgttgccatatacgatgacatggagagcctgcccctcactgggacccagtccaca
gcaatcccacctccaacaaacctgaagtttactcaggtaactcccaccagtcttaccgtc
aactggaacgcaccaaacgttcgcctcactggctacagagtcagagtgaaccccaaagaa
aagactggtcctatgaaagagatcaacctttcgccggacagtacgtctgctgtcgtgtct
ggattaatggtggcaaccaagtatgaagtgagcgtgtatgccctgaaggactctctgacc
agccgaccagcccagggggtggtcaccactcttgaaaatgtgagtccccctcgcagggcc
cgtgtgacagatgccaccgagacaaccatcaccattacctggagaaccaagactgagacc
atcactggcttccaagtggatgccgtcccagcgagtggccagaaccccattcaaaggacc
atcagccctgatgttaggactttcactatcacgggcttgcaacccggcaatgactacaag
atctacctttacactctgaacgagaatgcacgcagttccccagtagtgattgatgcctcc
actgctatcgatgctccttctaacctgcgcttccttacaaccacaagcaactccctcctg
gctacctggcagcccccacgagccaagatcacaggctacatcatcagatacgagaaacct
ggctcgcctgccaaggaggttctgcctcgcccccggcccggcaccaccgaggctactata
actggtttggaaccaggaaccgaatacatcatctacatcattgctgtgaagaacaatcaa
aagagtgaaccactggttggcagaaaaaggacagatgagcttcccacgttgattaccaga
ccgcaccccaaccaacccgacatcctcgacgtaccttccattgacgaggggaccccttac
ctcacaaacaataggtatgacaatggaaacggtatccaacttccaggcacctctgggcac
ccgcagacaataggacaccagggtcaacaagtcttctttgaggagcacggctacaggcgg
cctgtacccacgacagcaactccccttcggccggggtcaaggcggcaaccaccaaatgta
gatgaagcaattgaaatccctgggtaccaagtgcctatcatagtggaaccttcataccct
cactcccgtgggcccaggcgcaacgacaccacgggtcaagaagctctttctcagacaacc
atctcttggaggccgttgctggagagctccgagtacatcatctcatgccagccagtcagc
caggatgaagacactctgcagttcagggttcctggcacttcctccagtgctacgctcact
ggtcttacgagaggggccacctacaacatcatagtggaagccctgaaagaccaccggagg
caaaaggtgctggaggaggtggtcacagttggcaatactgtgtctgaaggactgaaccag
ccagctgacgacacctgcttcgacacttacactggctccttctattccattggcgaggag
tgggagcgcttatctgaaacaggctttaaactctggtgccagtgcttaggctttggcagc
ggtcatttcagatgcgattcttctaagtggtgccacgataatggtgtaaactacaagatc
ggggagaagtgggaccggcagggtgagaacggccagatgatgagctgcacctgccttgga
aatggaaaaggagaattcaagtgtgaacctcatgagaccacgtgctacgatgatgggaag
atgtaccaagttggagagcagtggcagaaggagtacttcggggccatctgctcctgcact
tgctacggagggcagcagggctggcgttgtgacaactgccgcagacccagcgtggaggtg
gcccccgaaggctctgccggccacacctacacccagtttacacagaggtaccaccaggcc
acgaacaccaacgtcaactgccccattgagtgtttcatgcccctagatgtacaggcagac
acacaacatccacggggaaagtaa
DBGET
integrated database retrieval system
