Tyto alba (Barn owl): 104365823
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Entry
104365823 CDS
T07816
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
tala
Tyto alba (Barn owl)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
VWA_2
FN3_Tor_3rd
DUF4998
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
104365823
NCBI-ProteinID:
XP_032866304
LinkDB
All DBs
Position
Unknown
AA seq
1473 aa
AA seq
DB search
MLIHTCFIFACLPVVSHVWGRVGQGSGRLKLTVLSEDRLQMKWKETEGNINGYKVRVKPM
AGDSEQEVMLKTKTPKATVGGLSPTKEYTLQVYVLNGSQEALFAKRKFVIEELKNASQTR
NNRRNSGAASGKNLTSLGNSAAEHSGVAEATPPPLNTVLTQPAKDKAEKKRQKGTQPKGS
GEATRNQPSAEASVTEATPTTTRSSQRTPANSERESLGKEKPTKDSLRRGSQFQCNTSAM
TDIVLLVDGSWSIGRNNFKLIKEFLSNLISPFSISQDKIRVGLSQYSSDPRTEWDLSTYS
TRDQVLEAMKNLRYKGGNTFTGLALTHVLEQNLKSDAGARLEAEKLVILLTDGKSQDDAN
LAAQTLKNLGIEIFAIGVKNADEAELKQVASEPLELTVYNVLDFPLLSSLVGRLTRVLCT
RIKEKSNKENAGSTVKDISANTGPQLSPTNLKISAVTSKSMHLSWSPPLRPPKKYRIVYY
PSKGGIPKEVILDGAVSSLQLSNLTSHTEYLVSVFPIYDTVVGDGLRGVTSTLPLSSPRS
LRVSELSHNSMRLSWKAAQGATHYLVLCSAAPDGAEDYTTEVKVAQPEVLLDGLSPSTEY
SVAVYAMYGEDASDPASIQETTLALSPPRYLSFSELSHASVRVSWEPASPAVKAHHVTYV
SSRGSNTGKVEVPGTATSTVLRPLSSLTQYFISVRSTYDEGDSFPITGNVTTLKVPPPRA
LKVTELSGNSLRLQWEAVAASDVVVYQIKWNTTGGEKPQELSVAGNVATAVLPGLQKNTD
YKISIWAYYKDGARSDTVSVQHRTNSRSPPTNLFIDSETPTSLQVHWTPPDGRIQHYKIT
YNPVSDAGAQQTIMASGKSSSVTLQSLLPDRAYRVIVSAIHYVGESEITSTTGRTAPVLS
KFPSIRGFVPSKTEACPTISSAEGSVRGFDMMEAFGLVEKEYASIKGVAMEPFVFSGSRT
FTLFRDTQLTQRTSDVHLFAIPPEHTIIILLRLLPETPKEPFAVWQITDEDFQPLLGVIL
DPSKKSLTYFNHDYKADLQEVSFDQQEVKKIFYGSFHKVHVAVSHFKIKLYLDCKKIAEK
PINTLGSISTAGFIMLGKVTRTRGPRSGSASFQLQSLRIMCSSGGAEEDRCCDLPALRDE
ETCPTLAPACSCTSGHPGLPGPPGPPGSPGRRGPQGQQGEPGPKGEPGPPGQIGPEGPSG
QQGSPGSQGITVQGPVGPPGIKGEKGDTGSPGMQGIPGVQGAPGRDGLQGAKGVRGLEGT
AGPPGPPGPRGFQGMTGSRGSSGEKGPPGDVGPTGLPGPKGERGEKGEPQSLATIYQLVS
QACERMIQTHVLKFDSFIHQHARKPVPVWEERLKPGEPGAPGPPGPPGSNGERGENGIPG
QPGKDGYPGERGAPGPKGEKGISGANGEGIQGPRGRTGPPGEVVLGKPGPKGNPGNAGPQ
GFPGARGQPGQSGYPGGCDVSGCYGASRRDFIP
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgctgattcacacttgtttcatttttgcctgcctgcctgtggtgagccacgtctgggga
cgagtgggccaagggtcaggccggctgaaactcactgtcctttcagaagacaggctccaa
atgaaatggaaagagactgaagggaacatcaacggctataaagttcgagtgaagcccatg
gcaggggactctgagcaagaagtcatgctgaaaaccaagactcccaaagccacagtgggg
gggctgagccctaccaaggaatatacgctgcaggtctacgtgctcaacggctcccaggaa
gccctgtttgccaagcggaaatttgtgatagaggaactcaaaaatgcatcccagactaga
aataaccgaagaaactcaggagctgcatcaggaaagaatctcacctctttggggaactcg
gcagctgagcacagtggggtggcagaggccaccccaccacccctgaacactgtcttgaca
cagccagcaaaggacaaagctgaaaagaaaaggcagaagggaactcagccaaagggctca
ggagaagccacaagaaaccagcccagtgcagaagccagtgtgacagaagcaacaccaaca
accacaagatcctcccaacgcactcctgcaaactcagagagagagtctctaggaaaagaa
aaacccacaaaggattcattgaggcgaggttcccagttccagtgcaacacatctgcaatg
actgatattgtcctgcttgtggatggatcctggagcatcggacgcaacaatttcaagctc
attaaggagtttctgagcaatttgatttccccgttcagtatttcccaagacaagataaga
gtagggctgtcccagtacagcagtgatccccgcacagagtgggacctgagcacttactct
acgagggaccaggtgctggaggccatgaaaaatttgcggtacaagggcggcaacaccttt
acaggtctggcactgacccacgtcctggaacagaatttgaaatcagatgctggtgcccgc
ctggaggctgagaagttggtgatactcctgactgatggaaaatcccaggatgatgccaat
ctggctgctcagactttgaaaaacctgggtatagagatatttgccattggggtgaagaat
gcggacgaggcagagctgaagcaagtggcctcggagccactggagctcaccgtgtacaac
gtgttggatttcccactgcttagctctctggttggcaggctcacccgggtcctgtgcacc
aggatcaaagagaagagcaacaaggaaaatgcaggcagcactgtgaaagatatctctgcg
aacacgggtcctcagctaagcccaaccaaccttaaaatatcagctgtgacctctaagagc
atgcacttgtcctggagtcctcctctgagaccaccaaagaaatacaggattgtgtattat
ccatctaagggtggtattcccaaagaggtgattttagatggagcagtctcctctttgcag
ctttccaatttgacctcgcacacggagtatctggtgtcggtgtttcctatttacgacacg
gttgttggggatgggctgagaggtgtcacctccacattacctttgtcttcccctcgctct
ctgcgtgtctctgagctgagccacaacagcatgaggctgagctggaaggcagcccaggga
gctacgcactacctggtgctctgctccgcagcccctgatggtgcagaggactatacaaca
gaggtgaaggtggcccagcctgaggtcctgctcgatgggctgtcgcccagcacagagtac
tctgtcgcggtgtacgcgatgtatggggaagatgcgagtgatccagccagcatccaggaa
accaccttggccttgagtcctcccagatacctgagcttctccgagctcagccacgcgtcc
gttcgagtcagctgggagcctgcgtctccggctgtgaaagctcaccacgtcacctatgtt
tctagcagagggagcaacactgggaaggtggaggtccctggcactgcaacatccactgtc
ctgagacctttgtcttccctcacccaatacttcatcagtgtcagatctacgtatgatgaa
ggggactcctttccaattacgggcaatgttaccaccttgaaggtccccccaccgcgtgcg
ctgaaggttaccgagctctccgggaacagcctccgactgcagtgggaagctgtcgccgcc
tctgatgtggttgtctatcagatcaaatggaacacaactggtggagagaagcctcaggag
ctctccgtcgctggaaatgtggcaacggctgtcctgccaggcttgcagaagaacactgac
tataaaatatccatctgggcctattacaaagatggtgctcgaagtgacactgtttctgtt
cagcacaggaccaattccaggagcccacccaccaacctcttcatcgactctgagaccccc
accagcctccaggtccactggacccccccagacggccgcatacagcactacaaaatcacc
tacaaccctgtttctgatgctggtgcccagcaaacaatcatggcttctggtaaaagcagc
agcgtgaccctgcagtcgttgctgcccgatcgagcctacagggtgatcgtttctgccatc
cactacgtgggagagagcgagatcacgtccacaacgggacggacggctcctgtgttgtct
aaattcccttcaatacgaggattcgttccatctaaaacagaggcctgccccaccatcagc
tctgcagaaggctccgtacgaggatttgacatgatggaagcttttggcttagtagagaag
gaatatgcctccattaaaggcgtagctatggagccatttgtattcagtggttcccgtacc
ttcaccctgttcagagacacccagctcacccagaggaccagtgacgtccacctctttgca
atcccacccgagcataccatcatcatcctcctgcgcctcctgcccgagacgcccaaggag
ccctttgctgtgtggcaaataacagacgaggacttccagccccttcttggtgttatcctt
gaccccagtaagaaatccttgacctacttcaatcatgactacaaggctgatttgcaggaa
gtctcctttgaccagcaggaagtgaagaagatattctatgggagctttcataaggtgcac
gtggccgtgagccacttcaagatcaaactctatctggactgtaagaaaatagcggagaaa
cctatcaacaccctcggcagcatctccactgctggcttcatcatgctgggaaaagtgaca
aggaccagaggacccaggagcgggtctgcatcgttccagctgcagtctttgcggatcatg
tgcagcagcggaggggcagaggaagacagatgctgtgacctccctgcactgagggatgag
gagacctgccctaccttagctcctgcctgctcgtgtacttctggccacccaggcttgcca
ggacccccagggccccccggcagccctgggaggaggggaccccaagggcagcagggcgag
ccaggacccaagggtgaaccaggcccacctggacaaatagggccagagggtcctagtggc
caacaaggctctccaggttctcaaggaatcactgttcagggtcctgtgggaccaccagga
attaaaggagagaaaggagacactggaagtcctggcatgcagggcattcctggtgtgcaa
ggagctccaggcagggatggtcttcaaggtgcaaagggggtgagggggctagaaggcaca
gctgggcctccgggacctcctggaccaaggggtttccaaggaatgacaggctcccggggc
agcagtggagagaagggacctccgggtgatgttgggccaacaggtcttccgggtccaaaa
ggagaaagaggagagaaaggggaaccacagtccttggccacaatttaccagcttgttagc
caggcttgtgagcggatgattcaaactcatgtgttgaagtttgactcattcattcatcag
catgcaaggaagccagttcctgtttgggaagaaaggttaaaaccaggagaaccaggagca
ccagggcctccaggtccccctgggagtaatggagaaagaggagaaaatggcatccctgga
cagccaggaaaagatgggtatcctggagaaagaggtgccccagggcccaaaggagaaaaa
gggatatctggagccaatggggaaggaatccaaggacccagaggcagaacaggcccacca
ggagaagttgtgctggggaaaccaggtcctaagggtaaccctgggaatgctggtcctcaa
ggttttcctggtgctagagggcagcctgggcagtctggatatccagggggttgtgatgtc
tctggatgctatggggcaagtagaagagatttcatcccctga
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