Tyto alba (Barn owl): 104366628
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Entry
104366628 CDS
T07816
Symbol
SMG5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104366628 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tala03019
]
104366628 (SMG5)
03032 DNA replication proteins [BR:
tala03032
]
104366628 (SMG5)
Messenger RNA biogenesis [BR:
tala03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104366628 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
104366628 (SMG5)
DNA replication proteins [BR:
tala03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
104366628 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
104366628
NCBI-ProteinID:
XP_042640917
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MSQGGGATGESGEPEAKVLHTKRLYRAVVEAVHRLDLILGNKAAYQEVFKPENISLRNKL
RELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGI
GFYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCLVYLG
DLARYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCI
QSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRGKDIKRLLVSFMYLQSLLQ
PKSSSLDSELTSLCQSVLEDFNLCLFYLPSPPNLSSTSEDEEEYESGYSFLPDLLIFRMV
IICLMSVHSLKRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFQSDGTD
DQEPREPLNSIEKEAEADLTNHQPSEEQRKNDCKKSKKYSRLSCLRRRRHPQKVDESDLS
EGFDSDSSQGSIKGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGEE
GSGRGKSGPKEALKNCVDGSGLGDSKSPSISKIEAPDPAVNGPASLSTNDASIASNLQAM
STQLFQTKRCFRLAPTFSNILLKPNSESPTLKDGIESKPCVNGDLEKPSLAEQDDVSDSE
ESISSNKSCRNERSLQEKLEIVTNEGLLLTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLS
VLLNLLPSAADLQESGLALCNEVKDILSGAELPDLKANLLLPEDVALRNLPPLKNAHKRF
NFEQDRPIFSAVEESVVRICCIRSFGHFITHLQGSILQFNSELGIFISIAQSEQDNLLHQ
AQAQFHMAAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQH
LAVVKQLATSGRFIIIIPRTVIDGLDFLKKENAGARDSIRYLEAEFKKGNRYIRCQKDVG
KSFERHKLKRQDLDAWNLYKILDSCKQLTVSQGSGEDDTTGMVTIITGFQLEDPTTFSAP
MQSAIQAAANASVEIKNVLEFYKQWKEMG
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgagccagggcggcggggccaccggcgagagcggcgagccggaggccaaggtgctgcac
accaagcggctgtaccgagcagtggtagaggctgttcatcgattggatctcatccttggc
aataaggcagcgtatcaagaagtgttcaagcctgagaacatcagcttgaggaacaagctg
cgggagctgtgtgtgaagctgatgttcttgcatccagtggattatggaagaaaagcagaa
gaactgctctggagaaaagtttactatgaagttatccagctcattaaaacaaataaaaag
cacattcacagccgtagcactctggagtgtgcgtaccggactcacttagttgctggcata
ggattttaccagcaccttctcctctacatccagtctcactatcagctggagctgcagtgc
tgcattgactggacgcatgtaacagaccctctcataggttgcaagaaacctgtgtctgca
tcggagaaggagatggagtgggcacagatggcatgtcacagatgtctggtttatctggga
gatctggctcgctatcagaatgaactggcaggcgtggacacagagttgctggctgagcgg
ttttactatcaagccctttctgttgcaccgcaaattggcatgccctttaaccagctgggg
actttggcagggagcaaatactacaatgtggaagctacctattgctacttacgttgtatc
cagtctgaagtgtcctttgaaggtgcctatgggaacctgaagcggctgtatgacaaagca
gccaaaatgtatcatcagttgaagaaatgtgaaaccaggaagctgtctccaagcaagaaa
cgaggcaaagacattaagaggttgctggtgagctttatgtacctgcagagtcttttgcag
ccaaagagcagttctctggattctgagctgacatctctctgccagtctgttctggaagat
ttcaacctgtgcttgttctacctgccatctccccctaatctgagctcaactagtgaagat
gaagaagagtatgagagtggctactccttccttcctgatctcctgatctttcgcatggtg
atcatctgccttatgagtgttcacagcctcaagagggcaggttcgaagcagtacagtgca
gccatagctttcacactggccctcttctctcacctgataaatcacgtcaatattcgcctg
caggcagagctagaagaaggggaaaatccagtcccagcctttcagagtgatggcacagat
gaccaggagccacgggagccactgaactcgattgagaaggaagctgaagctgacttgacc
aatcatcagcccagcgaggaacaacggaagaatgactgcaagaaaagcaagaaatactcc
cgcctctcctgtttgcgtcgccgccgccacccccagaaggtggatgagagtgacctgagt
gagggctttgactcggactccagccagggctccataaagggcagcgatggctcagaaagt
ggctcagagaagagtgatgaggaagcagaagctgcttttgatgtggagacagactctgac
atgaacagccaagaatctcggtctgacttggaggacatggaggatgagccaggtgaggag
ggaagtggccgaggcaaaagtgggcccaaagaggccttaaaaaactgtgtggatggcagt
gggctgggggactccaagagcccaagcatctctaaaattgaggctccggatccagcagtg
aatgggccagcttccctgagcactaatgatgcaagcatagccagtaatctccaggccatg
tccacccagctgtttcagaccaaacgctgctttcgcttggctcccactttcagcaacatc
cttctgaaaccgaacagtgaatcacccacgttgaaggatggaatagaaagcaagccgtgt
gtcaatggagatctggagaagcccagcttggcagagcaagatgatgtgtctgactctgag
gaaagcatttcaagtaacaaatcctgcaggaatgagcgatcccttcaggagaagctagag
atcgtgaccaacgaaggactgctgctcactgtcaaggtgttcctggactggctgaggaca
aacacggacctcatcatcatgtgtgctcagagctctcagagcctgtggaacaggctgtct
gtgctcctgaaccttttgccttctgctgcagacctgcaggaatcagggctggccctgtgt
aatgaagtcaaggacattctgagtggtgctgagctcccagacctgaaagccaacttgctg
ctcccagaagatgtggccctgcgaaatcttccccctctgaaaaatgcacacaagaggttt
aactttgagcaggaccggcccattttctcggcagttgaggagtctgttgttcggatttgc
tgcattcggagctttggccacttcattacccacttgcaaggcagcatcctgcagttcaac
tcagagcttgggatcttcatcagcatagcacagtcggagcaagacaacttgctgcaccaa
gcccaagcccagtttcacatggctgcagaggaagctcgtcggaacaggctaatgagagat
atggctcagcttcgactgcagctggaggtttctcagctggagggaagtctccagcagccc
aaagcacagtcagccatgtctccttatcttgtcccggacactcaggccctctgccagcac
ctggctgttgtcaagcagttggccaccagcgggaggttcataatcatcatccctcgaaca
gtgattgatggcttggacttcctgaaaaaggagaacgcaggtgctcgggacagcatccgg
tatctggaggcagaatttaaaaagggaaacaggtacattcgttgccagaaagatgttggg
aagagcttcgagaggcataaattgaagagacaagacttagatgcctggaatctctataaa
atactggacagctgcaaacaactgacagtgtcccaaggaagcggagaggacgacaccaca
ggaatggtcaccatcatcacgggctttcagctggaggacccgaccacgttctcggcgccc
atgcagtctgccatccaggcagccgccaatgccagtgtagaaataaaaaatgttctggag
ttctacaagcagtggaaagagatgggctga
DBGET
integrated database retrieval system
