Tyto alba (Barn owl): 104367218
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Entry
104367218 CDS
T07816
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha
KO
K08524
retinoid X receptor alpha
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03320
PPAR signaling pathway
tala04148
Efferocytosis
tala04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104367218 (RXRA)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
104367218 (RXRA)
03320 PPAR signaling pathway
104367218 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tala03000
]
104367218 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tala03310
]
104367218 (RXRA)
Transcription factors [BR:
tala03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
104367218 (RXRA)
Nuclear receptors [BR:
tala03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
104367218 (RXRA)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
104367218
NCBI-ProteinID:
XP_042642662
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All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MDTKHFLPLDFSNQVNSTSLNSPTSRGPMATPSLHPSIGPGIGSSLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPSTPSLGFGTSSPQLNSPMNSVSSEDIKPPLGLNGV
LKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKD
CLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKIL
EAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDD
QVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSK
MRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRFA
KLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaacacttcctgccactggatttctccaaccaagtcaattccacgtccttg
aactctcccacaagccgggggcccatggccaccccatccctccacccgtccatcgggccg
ggcatcggctcctcgctgggctccccgggccagctccactcgcccatcagcaccctgagc
tcgcccatcaacggcatgggacctccgttctccgtcatcagctcccccatgggcccgcac
tcaatgtccgtcccctccacccccagcctgggattcggcaccagcagcccgcagctcaac
tcgcccatgaactccgtcagctcggaagacattaagccacccctggggctcaatggagtc
ctcaaagtgccagcacatccctcaggaacgatggcctccttcaccaagcacatatgtgcc
atctgcggggacagatcttcaggtaaacattacggggtttacagctgtgagggctgcaaa
ggcttcttcaagcgcacggtgcggaaggacctcacctacacttgccgcgacaacaaagac
tgcttgatcgacaagcgccagcgcaaccgctgccagtactgccgctaccagaagtgtctt
gcgatggggatgaagcgagaagctgtccaggaggagaggcagcgggggaaggaccgcaac
gagaacgaggtggagtcgacaagtagcgccaacgaggacatgcccgtggaaaagatcttg
gaagctgaactcgcggtggagccaaagacagagacgtacattgaagcaaatatgggcttg
acgccaagctcgcccaatgacccggtgacgaacatatgccaggcagcagacaaacagctc
ttcaccctggtggagtgggccaagaggatccctcacttctccgagctgcccctggacgac
caggtcatcttgctcagagcagggtggaacgagctcctaatcgcctccttctcccaccgc
tccatcgccgtgaaagacgggatcctcttagccacggggctccacgtgcaccggaacagc
gcgcacagcgctggcgtcggggccatcttcgacagagtactgacagaactcgtgtcaaag
atgcgagacatgcagatggacaagacagagctaggctgcctgcgagccattgttctcttc
aaccctgactcgaaaggtctctccaacccggctgaagtggaagcgttacgggagaaggtg
tacgcgtcactagaggcatactgcaaacacaaataccccgaccagcccgggaggttcgca
aagctcttgctccgtctcccagccctccggtccatcggcctgaaatgcctggagcacctc
ttcttcttcaagctaataggcgacacaccaatcgacaccttcttgatggaaatgctggaa
gcgccccatcaaatgacttag
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