Tyto alba (Barn owl): 104367569
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Entry
104367569 CDS
T07816
Symbol
MEX3C
Name
(RefSeq) RNA-binding E3 ubiquitin-protein ligase MEX3C
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
tala
Tyto alba (Barn owl)
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tala03019
]
104367569 (MEX3C)
04121 Ubiquitin system [BR:
tala04121
]
104367569 (MEX3C)
Enzymes [BR:
tala01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104367569 (MEX3C)
Messenger RNA biogenesis [BR:
tala03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104367569 (MEX3C)
Ubiquitin system [BR:
tala04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104367569 (MEX3C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
Prok-RING_4
RING_XB3-XBAT31
zf-C3HC4
KH_2
KH_DEAH11_2nd
zf-RING_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
104367569
NCBI-ProteinID:
XP_042660557
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MPTVRAVAAYPAGEPAEPPRLPPDPPPPPLLLLQQRLSGLGLRHRGLGGAARRRAGLAAP
PDPPGEPGPGGAEEEEEEEEEEAAAGDEGHLEEELLAGEEEEEEEDPAALLLLSSSSSPS
QPLPLLPPLGSVLLSPAFDVQEAAAAGALGGAGDPQGMMAAMLSHAYGGGGGGGAAAGLN
GEPAGLLRRKSVNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPIFV
VTGRKEDVAMAKREILSAAEHFSMIRASRNKNSPALGGLPCTPNLPGQTTVQVRVPYRVV
GLVVGPKGATIKRIQQQTHTYIVTPSRDKEPIFEVTGMPENVDRAREEIEMHIAMRTGNY
VELNEENDFHYNGTDVSFEGGVLGCAWLASNPAPPSRTRMISNYRNDSSSSLGSGSTDSY
FGSNRLADFSPTSPFSTGNFWFGETVPSVGTEDLAVDSPVYDSLPTPSQTIWTPFEPVNP
LAGFGSDAAGSAKPPYRGSQPSTPRLSPTFSESLDHPLARRARSDPPSVGHQPGLPIYIP
AFSNGTNSYSSSNGGSASSSPAESRRKHDCVICFEREVIAALVPCGHNLFCMECANKICE
KETPSCPVCQTAVTQAIQIHS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgtcagagccgtggcggcctaccccgccggcgagcccgccgagcctccgcgg
ctccccccggacccgccgccgccgccgctgctgctgctccagcagcgcctctccggcctc
ggcctccgccaccgcggcctgggaggggcggctcggcggcgggcgggtttggcggcgccg
ccagacccccccggagagccggggcctggcggggcggaggaggaggaggaggaggaggag
gaggaggcggcggcgggggacgaggggcacctggaggaggagctgctggcaggggaggag
gaggaggaggaggaggacccggccgcgctgctgctgctctcctcgtcctcctcgccctcc
cagccgctcccgctgctgccgccgctgggctccgtcctgctctcgcccgccttcgatgtg
caggaggcggcggcggcgggagcgctcggcggggcgggcgatccgcagggcatgatggcg
gcgatgctgtcccacgcctacggcggcggcggcggcggcggcgcggcggcgggcctgaac
ggggagccagcggggctgctccgccgaaagagcgtcaacaccaccgagtgcgtgcccgtc
cccagctccgagcatgtggccgagatcgtggggcggcagggttgcaaaataaaagcacta
agggccaagacaaatacttacattaagacccccgttcgtggagaggaacccatctttgtt
gtcactggacgaaaagaggatgtagctatggcgaaaagggaaattctctcagctgctgaa
cacttctccatgatcagagcgtcgcgcaacaagaacagtcctgccctgggaggcttgcca
tgtacccccaacctgccgggccagacgacagtccaagtcagggtgccttaccgtgtagtt
gggctagtggtggggccgaagggagctacaatcaaaagaattcagcagcagacccacacc
tacatagtcactcccagcagggacaaggagcccatcttcgaagttacaggaatgcccgaa
aacgtggaccgggcgcgcgaggagatcgagatgcacatagccatgcgtaccgggaactac
gtggagctgaacgaggagaacgacttccactacaacggtacggatgtgagctttgaagga
ggcgtgctggggtgtgcgtggctggcttctaatcctgcccctcctagccgcaccaggatg
atctccaattatagaaacgacagctccagctccttgggaagtggctccacagattcctac
tttggaagcaatagactggctgacttcagcccaacgagtccgttcagcacaggcaacttc
tggttcggagaaacggtgccttcagtgggcacggaagacctcgcagtcgactcccctgtg
tacgactccttaccaacaccatcccaaaccatttggaccccttttgaacccgtaaaccca
ctcgctggcttcggcagcgacgcggcgggtagcgccaagcctccgtaccgagggagccag
ccgtcgactccccgcctgtcgcccacgttttcggaaagtctggatcacccgctggcgagg
agagcgaggagcgacccacctagcgtgggccaccaacccggccttcccatctacatccct
gctttctccaacggtaccaacagctactcctcatccaacggcggctccgcgtccagctct
cccgccgagtccaggcggaagcacgactgcgtcatctgcttcgagagggaagtcatcgcg
gccctggtgccctgcggccacaacctcttctgcatggagtgtgccaacaaaatctgtgaa
aaggaaacgccatcgtgtcccgtttgccagacagctgttactcaggcaatccaaattcac
tcttaa
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