Tyto alba (Barn owl): 104368081
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Entry
104368081 CDS
T07816
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X2
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
tala
Tyto alba (Barn owl)
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tala04121
]
104368081 (PDZRN3)
Enzymes [BR:
tala01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104368081 (PDZRN3)
Ubiquitin system [BR:
tala04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
104368081 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
104368081
NCBI-ProteinID:
XP_032841632
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MGCSLCTLQKQEEQYKLLYEVCQVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRTPRAK
VFTPPHDSQLVDVGTQTDITFEHIMALSKMSSPTPPVSVLDPYLLPEDHPSVHEYYDPND
YMGGIHQEMDRDELELEEVDLHRVNSQDKLGLTVCYRTDDEDDMGIYVSEIDPNSIAAKD
GRLREGDRIIQINGIEVQNREEAVALLTSEESKNISLLVARPEIQLDEGWMDDDRNDFLD
DLHMDMLEEQHHQAMQFTASMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDDSTRND
ESSEQENNADDHTTSSNTLGSQKKLTYSHDTLGSGDMQFSNESFISADCTDVDFLGIPVD
ECERFRELLELKCQVKSANPYSLYYHNSTLDMSKSDQESVDRELEMLNEELRNIELECLN
IVRAHKMQQLKDQYREPWMLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTG
ESCRSTPLTLEISPDNSLRRTAEGINCQGNEGAVAYNVSQKNLFASSESHESSTGKCHAS
AKDPDLGKQLESKERKASDGSKSPTHGQKPSGSYTSPYHHSPYKHAHIPAHAQHYQSYMQ
LIQQKSAVEYAQSQMSLVSMCKDFNSSQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRER
AIKIKEERSGMTTDDDAISEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQ
QGAEEKKEMNIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcagtttgtgcactctacagaagcaggaagaacagtacaagttactgtatgaa
gtttgtcaggtcaatggaaaggatttatctaaagcaacacacgagcaggcagtggaagca
ttcaaaacagccaaggagcccatcgtggtgcaggtcctgagaagaactccccgcgccaag
gtcttcactcctcctcacgactcgcagctggtagatgtgggcacacagaccgatatcacg
tttgaacacatcatggctctaagcaagatgagctcacctactccacctgtctctgtgcta
gacccctacctcctacctgaagaccatccatcagtgcatgaatactatgacccaaatgac
tacatgggaggaattcaccaagaaatggaccgagatgagttggaattagaggaagtagat
ttacatagagtgaacagccaggacaagcttggccttactgtatgctatagaacagatgat
gaagatgacatgggtatttatgtgagtgagattgatcccaacagtattgctgcaaaagac
ggacgactccgagaaggggatcgcattattcagatcaatggcatagaggtacagaaccga
gaagaagctgtggcacttctcaccagtgaagagagcaagaatatctccttacttgttgca
agaccagaaattcagctggatgaaggatggatggatgatgacagaaatgattttctggat
gacttgcacatggacatgttagaggaacagcaccaccaggcaatgcaatttactgccagc
atgcttcagcagaagaaacacgaggaggatggaggtaccacagatacagccactatttta
tctaaccagcacgagaaggacagtggcgtggggcgcacagacgacagcactcgcaacgac
gagagctctgagcaggaaaacaacgcagatgatcacaccacctcctccaacaccttaggg
agccagaagaagctgacgtacagtcatgacaccctaggaagtggcgatatgcagttcagc
aacgagtcatttatctcggccgactgcacagacgttgacttccttggcatccccgtagac
gaatgtgagagattccgggaactgctggaactgaagtgccaggtgaagtctgccaaccct
tacagtctgtattatcataacagcactctggatatgagcaaaagtgaccaagaaagcgtt
gacagagagctggaaatgctgaatgaggagctgcgcaatatcgagctagagtgcctgaat
attgtgagagctcataaaatgcagcagctgaaagatcagtacagagagccctggatgctg
cataacagcgggttccgcaactataacacaagcatcgacgttcgcaggcacgagctctca
gacattacagagctccccgagaagtctgacaaggatagctcgagtgcctataacacaggc
gaaagctgccgaagcacaccactcacgctggagatttcccctgacaattcgctgcgcaga
actgcagaaggcattaactgtcaaggtaatgagggggcagtggcatataatgtctcccaa
aagaacttatttgctagctcagaaagtcacgaatccagcactggtaaatgccatgcctct
gctaaagatcctgaccttggcaagcagctggaaagcaaggagagaaaagccagcgatggg
agcaaaagccctactcatggtcaaaaaccttctggctcctacacctccccataccatcac
tctccatacaagcatgctcatattcctgcccacgcacagcactatcagagctacatgcag
ctgatccaacagaaatcagcagtggagtatgcacagagccaaatgagtctggtgagtatg
tgcaaagactttaattcaagccagagcgaaccgaggatggagtggaaagtcaaggtcaga
agcgacgggacgcgctacattacaaagaggccagtcagggacaggctgctgagagaacgc
gccataaagatcaaggaggagcgcagtggtatgacaaccgacgacgatgccataagtgaa
atgaagatgggccgttactggagcaaggaggagcggaagcagcatttagtgaaagcgaag
gagcagaggaggaggcgtgagtttatgatgcagagcaggttagattgcttaaaggaacag
caaggcgcagaagaaaagaaagagatgaatatcattgaactgagccacaaaaaaatgatg
aagaagagaaataaaaaaatatttgacaattggatgacaatccaagaactgctaacccat
ggaacaaagtcaccagatggtacacgggtgtacaattccttcctgtcagtgactactgta
taa
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