Tyto alba (Barn owl): 104368177
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Entry
104368177 CDS
T07816
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
tala
Tyto alba (Barn owl)
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tala03036
]
104368177 (CHD5)
Chromosome and associated proteins [BR:
tala03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104368177 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
104368177
NCBI-ProteinID:
XP_042650771
LinkDB
All DBs
Position
Unknown
AA seq
1953 aa
AA seq
DB search
MRGPAAGRELLGGADNEEDVSEEDDGVLEGLEEFFAEEQVAVQKKKKSKKLKDSKAAKIK
RRKKEGSNDEMSDNEEEIEEKSESEGSDYSPNKKKKKKLKDKREKKPKRKKKDEEEDDNE
DGGLKEPKSSAQLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKM
MTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVSVTPPLAASPQQCAVPTVIRKAKT
KEGKGPGVRKKIKGSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSA
SINSSSVRSECSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRA
YHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEEGGEEEEDDHMEFCRVCKDG
GELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPAAPL
PPVLPDAELALPPPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKN
DMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDKKG
DIHYLIKWKDLPYDQCTWEIDEIDIPYYENLKHLYWNHRELMLGEDTRPLKKLNKKGKKL
KEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADE
MGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKES
RSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVV
DEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLE
EFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR
NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKL
MLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF
NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY
RFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVE
GMVSQGQRIAMPDAVTPFSDTLSTKGGAVTPGVKKKHGGTPPGDNKDVDDSSVIHYDDAA
ISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWE
KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDE
DFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGM
PPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVL
TRIGVMSLVRKKVQEFEHVNGKYSTPDLILEGPESKKSSEIVSSDPNTPVPASPAHMPTG
PVALVDKTEMQLGFQEEKDQVEQKCRKVSDSQVPASAEKVESEEPPENCDGKEKPREEKQ
EESEKAEPSPEPLVKDEGIQEKEKPSEKPELNSSPGKGEDREVRAAEDAKVEEKEQSEAQ
QNGDKEEEEDGKKDDRNMNFRFMFNIADGGFTELHTLWQNEERAAISSGKIYDIWHRRHD
YWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALV
IEEQLRRAAYLNMTQDPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVL
NQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLATRGGDPAVQQGSFGSSQ
IYNNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgcggggaccggcggccggccgggagctgctgggcggcgcggacaacgaggaggacgtc
tcggaagaagatgatggggtgctggaaggactggaggagtttttcgcagaggagcaagtt
gctgtgcagaagaagaagaaatcaaagaagctgaaagacagcaaggctgccaaaatcaag
aggaggaagaaggaggggagcaatgatgaaatgtcagacaacgaagaggagatcgaggag
aaatctgagagtgaagggagcgactattcccccaacaaaaagaagaagaaaaaactgaag
gacaagagggagaaaaagccaaaacggaagaagaaggatgaagaggaggatgacaatgaa
gatggaggtctgaaggagccgaagagctcagcccagctgatggaagaatggggcctcgat
gatgtagattatgttttctcagaagaagattatcatactctgactaattacaaggctttc
agccagttcctcaggcctctgatcgccaagaagaaccccaagatccccatgtccaagatg
atgaccgtgctcggtgccaagtggcgggagttcagtgccaacaacccgttcaagggcagc
tcggcggcagcggcggcagcggccgtcgctgcagctgtggagaccgtcagtgtcaccccg
ccgctcgccgccagcccccagcagtgcgccgtgcccaccgtcatcaggaaggccaagacc
aaggagggcaagggtccaggcgtgcggaagaaaatcaagggctccaaagacgggaagaaa
aaggggaaggggaaaaagatggcaggcttgaaattccggtttggaggaatccccagcaaa
aggaaaaagggctcctcgagcgaagaggaagagcgggaggaatccgacttcgacagtgcc
agcatcaacagctcctcagtgcgctccgagtgctcggctggcctggggaagagagggaag
aggaggagaaagaaaaagaggatcgaagaaggggatggctatgagacggaccaccaggac
tactgcgaggtgtgccagcagggcggggagatcatcctgtgcgacacttgtccgcgcgcc
taccacctcgtctgcctggaccccgagctggagaaggcccccgagggcaagtggagctgc
ccccactgcgagaaggagggcatccagtgggagccgaaggaggaggaggaggaggaagag
gaaggtggcgaggaggaggaggacgaccacatggagttctgtcgggtctgtaaggacggt
ggggagctgctgtgctgcgacacctgcccgtcgtcctaccacctccactgcctgaacccg
ccgctgccagaaataccaaacggtgaatggctctgccctcgctgtacatgccctcccttg
aagggcaaagtccagcgcatcctgcactgggcctggaaggagccgccggccgccccgctc
ccgcccgtgctgccggacgcggagctggctctgcccccgcccaaggtgctggaggggatc
ccggagcgcgagttcttcgtgaagtgggcaggcctctcctactggcactgctcctgggtc
aaggagctgcagctggagctctaccacaccgtcatgtaccgcaactaccaacggaagaac
gacatggatgagccgccggccttcgactacggctctggggatgaggacagccagagggag
aagcggaagaacaaagacccccagtacgccaagatggaggagcggttctaccgctacggc
atcaagcctgagtggatgatgatccaccgcatcctgaaccacagctttgacaaaaaggga
gacatccattacctgatcaagtggaaagacctgccgtacgaccagtgcacctgggagatc
gacgagatagacatcccctactacgaaaacctcaaacacctctactggaaccacagggag
ctgatgctgggggaagacacgcgccctctgaagaagctgaacaagaaagggaaaaagctg
aaagaggagaagctggaaaagcctccagaaacgcctctcgtggaccctacggtgaagttt
gacaagcagccgtggtacatcgatgccacgggaggcacgctccatccttaccagctggaa
gggctgaactggctgagattttcctgggcccaagggacggatacaatcctggccgatgag
atggggctggggaagactgtgcagactattgtgttcttgtattccctgtacaaggagggc
cactcaaaagggccgtatctggtcagtgcccctctctccaccatcatcaactgggagcgc
gagtttgagatgtgggcacctgacttctatgttgtgacctacacgggggacaaagaaagc
cggtcagtcatccgggaaaatgagttttcttttgaagacaacgccatccggagtggaaag
aaggttttccggatgaagaaggaagcccagatcaagttccatgtcctgctcacctcctac
gagctgatcactattgaccaggcggtgctgggctccatcgagtgggcctgtctggtggtg
gatgaagcgcacaggctgaagaacaaccagtccaaattctttagagtattaaatagctac
aagatcgactataagctgctgctcactgggaccccgctccagaacaacttggaagagctc
ttccacctgctcaatttcctgacgcccgagaggtttaataacctggaggggttcctggag
gagtttgcagacatctccaaggaggaccagatcaaaaagctccatgatctgctgggtccc
cacatgctgcggcggctcaaggcggatgtgttcaagaacatgccggccaagacggagctg
attgtgagagtggagctgagccagatgcagaagaagtactacaaattcatattgacgagg
aattttgaagccctgaattcgaagggtggtgggaaccaggtctcgctgctcaacatcatg
atggacctgaagaagtgctgcaatcacccgtacctctttcctgtggcggcggtggaggcc
ccagtgctgcccaacggatcctacgatgggaattcgttggtcaaatcttctgggaaactg
atgctgctccaaaagatgctgaagaagttacgggatggaggccacagagttctgatcttc
tcccagatgacgaagatgctggacttgctggaggatttcctggagtacgaaggctacaag
tacgagcggatagacgggggcatcaccggcggcctgcgccaggaggccatagacaggttt
aacgctcctggtgctcagcagttctgctttctcctctctacccgcgccggcggtctgggc
ataaaccttgctacagccgacacagtcattatttatgattctgactggaatccccacaat
gacatccaggcgttcagcagagctcaccgcatcgggcagaacaagaaggtgatgatctac
cgcttcgtgaccagagcctccgttgaagagcgcatcacccaggtggccaaaaggaagatg
atgctcacccatctggtggtccgcccggggctcggctccaagtcgggctccatgaccaag
caagagctggacgacatcctcaagtttgggacagaagagctcttcaaggatgatgtggaa
ggcatggtgtctcaggggcagcggatcgccatgccagatgctgtcacccctttctctgac
acgctgtcaaccaaggggggtgcagtgactcccggtgtgaaaaaaaagcacggtggcacc
ccaccgggtgacaataaggacgtggatgacagcagcgtgatccactacgacgatgctgcc
atctccaaacttctggaccgaaaccaggacgcgactgatgacacggagctgcagaacatg
aacgagtatctcagctcctttaaagtggcccagtatgttgtgagagaagaggacggtgtg
gaggaggtggaacgtgagatcatcaagcaagaggagaatgtggaccccgactactgggag
aagctgctgcggcaccactatgagcagcagcaggaagatctggccaggaacttggggaaa
gggaagagaatccgcaagcaggtcaactacaacgacgcctcgcaggaggaccaggagtgg
caggacgagctctctgacaaccagtcagagtactccattggctccgaggatgaggatgaa
gactttgaagagaggccagaaggtcagagtggcagaagacaatcccggaggcagctgaag
agcgaccgggacaagcctctccctcctttgctggcaagagttggggggaacattgaggtt
cttggcttcaacgcccggcagcgcaaggctttcctgaacgccatcatgcgctggggcatg
ccgccccaggacgccttcaactctcactggctggtccgggacctgcgagggaagagcgag
aaggagttcagggcgtacgtgtctctcttcatgaggcatctgtgtgaacccggggcggat
ggtgccgaaaccttcgcagacggtgttccccgggaagggctgtcacgccagcacgtcctg
actcgcataggcgtcatgtcactagtaaggaagaaggtgcaggagtttgagcatgtcaac
ggcaagtacagcaccccggatctgattctcgagggcccggagagcaagaagtccagtgag
attgtgtcttcagatcccaacacccctgtcccggccagcccagcacatatgcccacggga
cccgtggcccttgtggacaaaacagaaatgcagctcgggttccaggaggagaaggaccaa
gtggagcagaagtgcaggaaggtgtctgacagccaggtgcctgcgagcgcagagaaggtg
gaaagcgaagagcccccggaaaactgtgatggcaaagagaaaccgagggaagagaagcaa
gaggagagtgaaaaggctgagccttctcccgagcccctggtgaaagatgaggggattcaa
gagaaagagaagccttcggagaagccagagttgaacagcagcccagggaaaggggaggac
agagaagtcagagcagcagaggacgccaaggtggaagagaaggagcaaagcgaggctcag
caaaatggtgacaaagaggaagaggaggacgggaagaaggacgacagaaacatgaacttc
cgattcatgttcaacattgctgacggtggctttacagagctgcacacgctgtggcagaac
gaggagagggctgccatctcctccggcaagatctatgacatctggcaccgccgacacgac
tactggctgttggcaggaattgtcactcacggctatgcccgctggcaggacatccagaac
gacccgcgctacgtgatcctgaacgagcccttcaagtcggagatacataaggggaactac
ctcgagatgaagaacaagttccttgcccggcggttcaagttgctggagcaggccctggtg
atcgaggagcagctgcggagggctgcgtacctcaacatgacccaagaccccagtcacccg
gccatggccttgaacgcccgtctggctgaagtggagtgccttgccgagagccaccagcac
ctctccaaagagtccctggctgggaacaagcctgcgaacgccgtcctgcacaaggtgctg
aaccagctcgaggagctgctgagcgacatgaaggccgacgtgacgcgcctgccctccatg
ctgtcccgcatcccgcccgtggccgcccggctgcagatgtcggagcggagcatcctcagc
cgcctggccacccgcggcggggaccccgctgtgcagcagggctccttcggttcctcccag
atctacaacaacaacttcgggccaaatttccgaggtcccgggccgggcgggattgtcaac
tacagtcagatgcctctgggaccgtacgtgaccgatatttag
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integrated database retrieval system
