Tyto alba (Barn owl): 104368454
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Entry
104368454 CDS
T07816
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
tala
Tyto alba (Barn owl)
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tala03036
]
104368454 (HFM1)
Enzymes [BR:
tala01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104368454 (HFM1)
Chromosome and associated proteins [BR:
tala03036
]
Eukaryotic type
Meiosis-specific proteins
Others
104368454 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
104368454
NCBI-ProteinID:
XP_042641629
LinkDB
All DBs
Position
Unknown
AA seq
1440 aa
AA seq
DB search
MFNCTDTVFSLDDLFYEGPDTRQRYLENEEPKIWCIAPAPAIAEIPTAEELQRELEKTTD
NTYMGGRKHQQFIQQYKTKAEEINDKSAAPVNFDIASEKEVLQLSVGERQKISFQHENLK
MVSLFLSSDQDKSKTGTQVSKQPGTIFSQNNILSNFPENSDDDSVCSTLRKSLFKTSGYT
YKNTEFKDSCVDVKEIDTYLNTRENMKEMRKEGLWRNDHHTLITKDSNFTLHRLNDGDIE
SKNGIKSFSNASEILDMTGTTGRKLEILRAVTEIPTQFRSIFKEFPYFNYAQSKALDDLL
YTDRNFVICAPTGSGKTVMFELAITRLLMEAPLPWLNIKVVYMAPIKALCSQRFDDWKEK
FGPVGLSCKELTGDTVMDDLFEIHHAHIIITTPEKWDSMTRRWRDNSIVQLVRLFLIDEV
HVIKDESRGATLEVVVSRMKTVQCSLWRLSANHDTVPPLRFVAVSATIPNAEDIAEWLSD
RKMPAVCLKIDEDQRPVKLRKIVLGFPCSDNQTEFKFDLTLNYKIASIIQTYSEQKPALV
FCATRKGVQQAASVLAKDAKFLLSIEQKQRLQRSANSLKDSKLRDLFMYGVAYHHAGMEL
SDRKIIEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYVGGMFQEYSETDILQMI
GRAGRPQFDTTATAVIMTRWSTREKYIQMLNGADIIESSLHRHLVEHLNAEIVLHTVTDV
TVALEWIRSTFLYIRALKNPTHYGFSPGLDKIGIEAKLQELCLKNLNDLSSFDLIRMDET
NNFKPTETGRLMAWYYIAFDTVKQFFTIKGTETLNELITMISNCTEFLDVKLRINEKKIL
NTLNKDKDKMTIRFPMEGKIKTREMKINCLIQAQLGCIPIQDFTLTQDTGRIFRNGLRVT
RWLSDFLASCKNNFSAFLNSLILAKCFRCKLWENSLHVSKQLEKIGVSLSNTMVNAGLTS
FKKIEDTNARELELILNRHPPFGNQIKESVLHLPKYELDIEQLPKYSDTLAEILITIKLT
NYEQLQTKRTATDFHYVTLVIGDADNQVIFNQKIMDSVLLKTGNWTKKIEVKRALKSEDI
SINLISSDYVGLDIQQAYTAFYLTPKPVGSKVVTNQNLKAESSLDMYYGSPQSLPAAKVD
RGGRSKQEITYKKYGNRECNHRCKNKDVCGHDCCKTGVPPKSEMNGDSKFSLYLADLRSR
NSVSSVPPVKRLKMQMLNHTQNVDLKQFAFTPKSLSPALPRSDNKQSSSSPSVDQVDNVN
SLGVSQKQLQSRNYGKSNALGVDFELRDDIWDDIDDEKLVFASNFASRELDECEPLCQYT
RSKATNDVSKASCTLQDETSIWNSVVSVVSSTSKVNVSVQSGNMNMLSFQEKKHSNLSQE
LKNVQCPSISKIISDSSKFTRKDDFFIFTKEQEKEVDPRYLLDDENNDVNPFLGIFDGIL
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactgtacagatacggtcttttcattggatgatttattttatgaaggcccagat
acaagacaaaggtatctagaaaatgaagagcctaagatttggtgtattgcacctgctcca
gctattgctgaaattccaactgcagaggagttacagagggaattggaaaaaaccacagac
aacacttacatgggagggagaaaacaccagcagtttatacaacaatataagactaaagct
gaggaaataaatgataaatcagcagcacctgttaattttgacatagcctctgaaaaagaa
gttctccaactaagtgtaggagaaagacagaaaattagttttcagcatgaaaatctgaaa
atggtttcattgtttctctcttctgaccaagataaatctaaaacaggaacacaggtttct
aagcaacctggtacaattttttcacaaaataacatattaagcaattttccagaaaacagt
gatgatgacagtgtctgttcaacattaagaaaaagcttatttaaaacgtctggttataca
tacaaaaatacagaatttaaagatagttgtgtggatgtgaaagaaattgatacttactta
aatacaagagaaaacatgaaagaaatgagaaaagaaggtttatggagaaatgatcatcat
actctgataactaaagactcaaatttcactctgcatagattaaatgatggggacattgaa
tctaaaaatggaattaaatcattttccaatgcttcagagattctggatatgacaggaact
acaggaagaaaattggaaattttgagggcggttacagaaataccaacccaatttagaagt
atttttaaggagttcccatattttaactatgcacagtctaaagctttggatgatcttctt
tatacagatcgaaattttgtgatttgtgctccgactggctctggaaaaactgtaatgttc
gagctagctattaccagattactcatggaagccccactgccttggttgaatattaaagtt
gtttacatggctccaataaaagctctatgcagtcaacgttttgatgattggaaagaaaaa
tttgggcctgtaggactcagctgcaaggaactgacaggagatacagtgatggatgattta
tttgaaatacatcacgctcacattatcatcactacacctgaaaaatgggatagcatgact
agaaggtggagagacaactcgatagtccagcttgtacgactgtttctcattgatgaggtg
catgttataaaggatgaaagccgtggtgcaacattagaagttgtagtcagtcgaatgaag
actgttcagtgttctctttggcgtctttcagcaaatcatgacactgtgcctcccttgaga
tttgtagctgtttctgcaacaatcccaaatgctgaagatattgcagaatggctttccgat
cgtaagatgcctgctgtatgtctgaaaatagatgaggatcaacgaccagtgaagctacgc
aaaattgtgcttggttttccttgcagtgacaatcagacagaattcaaatttgacttaact
cttaactacaagatagctagtattatacaaacatactctgaacaaaaaccagcacttgtg
ttttgtgccacaagaaaaggcgtacagcaggctgcttctgttcttgcaaaagatgctaaa
tttctactgagtatagaacagaaacaaagattacagaggtctgcaaattcattgaaagat
tccaaactgagagatcttttcatgtatggtgtggcttatcatcatgcgggtatggagtta
tctgacagaaaaataattgaaggagcttttactgtaggagacttaccagtactttttact
actagcaccttagctatgggagtcaatctacctgcacatctggtggttataaaatccaca
atgcactatgttggaggaatgtttcaagagtacagtgaaactgatattctgcaaatgatt
gggagagcaggaaggcctcaatttgacactacagctacagcagttattatgactcgttgg
agtacaagggagaagtatatacagatgttaaatggtgctgatataatagagagcagctta
cacaggcatcttgttgagcacttaaatgcagaaatagtgctacataccgtcacagatgtc
actgtagctttggagtggatacgatcaacattcttgtacattagagctttaaaaaatcca
actcattatggtttttcacctggattagataaaatcggaattgaagcaaaattacaagaa
ctgtgtttgaagaacttaaatgatttatcatcttttgatttgatcaggatggatgaaaca
aataatttcaaaccaacagagactggaagattaatggcatggtattatattgcatttgat
acagtgaaacaatttttcacaattaagggaacagagactttgaatgaattgattacaatg
atctccaactgcacagaatttctggatgtcaagttaagaataaatgaaaagaaaatactt
aacactttgaataaagacaaggacaaaatgactatcaggtttccaatggaggggaagata
aaaacaagagaaatgaaaataaactgtcttattcaggctcagctaggatgcattcctatt
caggacttcactttgacgcaagatactggcagaatatttagaaatggcttaagagttact
agatggttatctgacttcctggcatcatgcaagaacaacttttctgcttttttaaattct
ctgattttagcaaagtgtttcaggtgcaaactttgggaaaattcacttcatgtgtctaag
caattggaaaaaattggtgtatcactgtcaaacactatggtaaatgctgggctgacatca
tttaaaaaaatagaagacacaaatgcaagggaacttgaattgattttaaacagacatcct
ccttttggaaaccagataaaagaatctgttttgcaccttccaaaatatgaacttgacatt
gaacagcttccaaaatacagtgatacattggctgaaatcttgataaccatcaaattgaca
aactatgagcagctacagacaaagagaacagcaacagactttcactatgttacattggtc
ataggagatgctgacaaccaagtcatttttaatcagaaaattatggattctgtgctgctg
aaaactggaaattggacaaagaaaattgaagtgaaaagagctcttaaatcagaggacatt
agtataaatttaattagttctgattatgttggccttgatatacagcaagcatatactgcc
ttttacttaacaccaaaaccagtgggaagtaaagtggttacaaatcaaaacctgaaagct
gagtcttcacttgatatgtattatggctcaccacaaagtctgccagcagcaaaagtagat
agaggaggcagatctaaacaagagattacttacaagaaatatggaaacagagaatgcaac
catcgctgtaaaaataaggatgtgtgtggacatgactgctgtaaaacgggagtacctcca
aagtctgagatgaatggagattcaaagttttctttatacctagctgatttaagaagcagg
aactcagtttcatctgtacccccagtaaaacggttaaagatgcagatgttaaatcatact
cagaatgtggacctcaaacaatttgcttttacacctaagtctttgtcgccagcattgcca
aggtctgacaataaacagtcatcttcatcaccctcagtggaccaggtagataatgttaat
agcttaggagtctctcagaaacaactgcaatcccggaattatggaaagagtaatgctttg
ggcgtggactttgaactgagagatgatatttgggatgatattgatgatgagaagttagta
tttgcgagcaactttgccagtagagaattagatgagtgtgaaccactttgccagtataca
agaagcaaagccacaaatgatgtttcaaaagcctcatgcacattacaagatgagaccagt
atttggaactcagttgtttctgtggttagcagcacatcaaaagtgaatgtatctgtacag
agtggaaatatgaatatgctcagttttcaagaaaaaaagcattcaaatctttcacaagag
ctgaaaaacgtacagtgtccttcaatctcaaaaataatctcagattcttcgaaattcact
aggaaagatgatttttttattttcacaaaagaacaggaaaaagaagtggatcccagatat
cttcttgacgatgaaaacaacgatgtcaacccctttcttggaatatttgatggtattttg
taa
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