Tyto alba (Barn owl): 104368844
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Entry
104368844 CDS
T07816
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
tala
Tyto alba (Barn owl)
Pathway
tala04382
Cornified envelope formation
tala04510
Focal adhesion
tala04512
ECM-receptor interaction
tala04518
Integrin signaling
tala04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104368844 (COL4A3)
04518 Integrin signaling
104368844 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104368844 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104368844 (COL4A3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104368844 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tala04147
]
104368844 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
tala00536
]
104368844 (COL4A3)
Exosome [BR:
tala04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104368844 (COL4A3)
Glycosaminoglycan binding proteins [BR:
tala00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104368844 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104368844
NCBI-ProteinID:
XP_032861265
LinkDB
All DBs
Position
Unknown
AA seq
1672 aa
AA seq
DB search
MAGRAGPSRPALLLLLLALLRPGRAAAAESCVCKGKSPCFCDSMKGNKGEKGFPGVPGPP
GHRGFPGPEGPPGPQGPKGSPGLMGFVGPKGIRGVPGIPGFSGPPGLPGEPGAVGPPGSL
GVPGCNGTKGDRGFPGPPGRRGAPGVPGIAGIKGEKGCPADGYNQGYGAKGDPGLPGMPG
LQGAQGPQGYPGELGPQGPPGVSGLPGKAGPPGPKGLMGLKVIGTKGRKGDTGLTGPPGP
PGTVIVTLSGPDNMTDLKGEKGEKGSRGLPGPMGFTGPVGDSQSEKGDRGEPGAQGKPGK
EGAPGPPGLPGPKGEQGKPGLAGRLGAKGMKGNVGPPGACGQTEYYDHVIHEKGDEGPPG
PPGPKGQRGMPGPQGRPGDAGRPGVSRPGLRGPPGFPGPKGKKGEKGQTGLCIVGPPGLP
GIAGRPGSVGLPGPPGEPGRVTFKTGLPGLPGEPGCTGPPGPPGDIGMKGDEAYLCTDCS
YILGMPGLPGSPGPHGQDGMPGREGTTGPKGSPGSPGAPGFPGAQGPPGFRGDQGHKGSK
GEPGYVYPEGPKGERGDPGAKGDKGRKGSSGFRGRPGSKGSKGSKGEEGLAGSKGDRGLL
GLPGSLGHPGERGLPGLPGYGPQGIRGFKGSKGIPGPPGLPGEAGLKGETSRITPLPALP
GPQGPDGLPGPPGVPGRAGARGQPGDTGHPGPTGDTGFPGLGFPGNPGPKGDKGLAGGRG
SPGCEGKIGDPGRAGNLGQPGEKGDPGMVIPGEPGRLGSPGGHGIPGSKGDTGFPGLPGL
PGRAGHDGDDGLRGDRGSPGVPGDPGFPGKPAECLIGLPGLPGGQGATGPPGGRGSQGSK
GKLGPPGLSIPGIYGTPGEPGLIGLQGNTGLPGPKGQSGRPGISGVPGSRGEPGTMGWLG
IPGPPGMIGRPGNPGVRGSSGFPGLKGRKGFLGAKGEPGDKGFPGPFETLVGTGNKGEQG
LKGVQGRMGLRGEKGYAGVQGPPGLDGSEGIPGVPGVKGFMGLPGIPGGQGFPGAPGNKG
DMGTPGPKGQKGSPGFPGPSGDPGPPGYAGFPGDKGDPGYPSPGPPGEPGPKGDPGPPGV
LGSKGEKGSQGHPGHKGVPGSHGIRGETGGAGIPGKLGPPGDTGVKGQQGRPGQQGIIGP
PGAVGVPGKNGLVGERGNQGQDGMPGPPGVKGEPGASGRGIPGLQGIPGRRGIKGDMGLP
GFPGPPGMKGHQGDQGPIGPPGLPGLPGFQGTTGIAITGQKGNRGTAGADGRPGAPGFPG
PPGLSTPSMKGSKGVRGADGIPGPTGPAGDTGPPGPKGIEGQSGYPGARGDQGFLGFPGV
KGEKGNQGPPGPQGAEGPRGPKGQHGAPGVTGRIFSIPGSKGPPGPPGIPGTPGDQGIEG
IPGLQGLKGVKGLPGRFGLPGQPGLPGPKGDRGFPGQRGQPGLIGFPGLQGLPGSPGTII
AGPTRRGFIFTRHSQSTKIPSCPHGTSQIYVGYSLLFVQGNERAHGQDLGTAGSCLQRFN
TMPFLFCNTNDVCSFASRNDYSYWLSTAAVMPVDMAPISGRALEPHISRCVVCEGAAMVI
AVHSQTTVVPACPEGWISLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRAIPFIECHG
RGTCNYYTNSYSFWLASLNPRRMFRKPLPQTLKAGELENIISRCQVCMKRPA
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atggccggcagggctggtcccagccgcccggcgctgctgctgctgctgctcgccctgctc
cggccgggccgcgccgcggcggcggagagctgtgtatgcaaaggtaaaagtccctgcttt
tgcgatagcatgaaaggtaataagggtgaaaaaggctttcctggtgttccaggtccacct
ggtcatagaggctttcctggtccagaagggcctccagggccacagggaccaaagggttct
ccagggcttatgggctttgttggacccaaaggtatacgaggagtcccaggaatacctgga
ttttcaggtcccccaggccttccaggtgaaccgggagctgttggtcctcctgggtcattg
ggtgttccaggttgcaatggcacaaagggtgatcgaggttttccaggtcctccaggtaga
agaggtgctccaggagttccaggtattgctggcatcaaaggagagaaggggtgccctgca
gatggatataaccaagggtatggtgcaaaaggtgatcctggattgccaggaatgcctgga
cttcagggggcccagggtcctcaaggatatcctggggaacttggaccacagggccctcca
ggtgtttcaggcttgccagggaaagcaggacctcctggacctaagggtcttatgggactg
aaagtaataggaaccaaaggaagaaagggtgacactgggttaactggaccccctggacca
ccgggaactgttattgtgacattaagtggaccagacaacatgacggacttgaaaggagag
aaaggagaaaaagggtcaagaggacttccagggccaatggggtttacagggccagttggt
gattctcaaagtgaaaagggcgaccgaggagaacccggagcacagggtaaacctggaaaa
gaaggtgccccgggtccacctggtttaccgggaccaaagggtgaacagggcaaaccagga
ctggctggcaggctgggagctaaggggatgaaaggaaacgttggtccacctggagcttgc
ggtcaaacggagtactatgatcatgtgattcatgaaaaaggagatgaaggaccccctgga
cctccaggaccaaaaggtcaacgtggcatgccggggccacagggtcgtcccggagatgct
ggtagaccaggtgtgtcaagacctggtttgagaggtcccccaggatttcctgggccaaag
ggaaaaaaaggagagaaaggacaaactggcttatgtattgtaggccctccaggactgcct
ggtattgctggcagacctggttctgttggattaccaggtcccccaggagaaccaggtaga
gtaacatttaaaacaggcctaccaggacttcccggagagccagggtgtacaggacctcca
ggacctccaggagatattggcatgaaaggtgatgaagcttacttgtgtactgattgcagc
tatattctgggaatgcctggtcttcctggttctcctgggccacatggccaggatggcatg
cctggtagagaaggaacaacaggtccaaaaggttctccaggttctccaggagcaccaggg
tttccaggagctcaaggacctccaggttttagaggagatcaaggacataaaggatcaaaa
ggtgagccaggatatgtgtatccagaagggccgaaaggtgagcgaggagatccaggggcc
aagggagacaaaggaaggaaaggttcaagtggatttcgaggaagacctggctctaaagga
tccaagggttctaaaggtgaagagggattggctggttcaaaaggagatcgaggactactg
ggattacctggcagtcttggtcatcctggagagagggggcttcctggactgccaggatat
ggaccgcaaggaataagaggtttcaaaggctctaaaggaatacctggtccacctggatta
cctggagaagctggcctgaaaggagagaccagtaggataactccactgcctgcattgcca
ggacctcaaggaccagatggtttacctggacccccaggagtgcctggtagggctggagca
agaggtcagccaggtgatacaggacatccagggccaacaggtgacacaggctttccaggg
cttgggtttcctggaaacccaggtccaaaaggagacaaaggacttgcagggggcagaggg
tcaccaggttgtgaaggaaagattggagatccaggccgagctggaaacctaggacaacca
ggagaaaagggtgacccaggcatggttattcctggagagccaggtagactgggttcacca
ggaggtcatggtattcctggctcaaaaggtgatactggatttccaggacttccaggccta
ccagggcgtgctggacatgatggtgatgatggcctaagaggagatcgtggctcacctgga
gttcctggagatccaggttttccagggaaacctgctgaatgtcttattggcttgccaggt
ttgccaggtggccagggagctacaggcccaccaggaggaagaggttcgcaaggttcaaaa
ggaaaactaggtcctcctggcttgagtatcccaggaatctatggaacacctggggaacct
ggattgataggtcttcagggaaatacaggattacctggtcccaagggacagtctggaagg
ccaggaatctctggtgtgccaggttcaaggggagagccaggtacaatgggctggttagga
attcctggaccccctggcatgattggaagaccaggaaacccaggtgtcagaggttcttct
ggcttcccaggactgaagggaagaaaagggtttcttggagcaaaaggcgaaccaggtgat
aaaggttttcccggaccatttgagaccttggttggtactgggaataaaggagaacaaggc
ttaaaaggagttcaaggaagaatgggtctaagaggagaaaaaggatatgctggagtgcaa
ggtcccccaggtcttgatgggtctgaaggaatacctggtgtaccaggtgtcaaaggattt
atgggtcttccagggattcctggaggacaaggattcccaggtgcaccaggaaacaaaggg
gacatgggaactccaggtccaaaaggtcagaaaggatctccaggctttccaggaccatca
ggtgaccctggtccaccaggctatgctggctttccaggtgacaaaggagatcctggctac
ccatctcctgggcctccaggagaacctggtccaaagggagatccaggacccccaggagtt
ctgggcagcaaaggagaaaaaggatcccaaggtcatccaggacataaaggagtaccagga
tcacatggaatcagaggggaaactggaggtgcaggaatcccagggaagcttggacctcct
ggagatactggtgtcaaaggacagcagggccgtccaggacaacagggcattataggccct
cctggtgctgttggagtccctggaaaaaatggacttgttggtgaaagaggtaatcaaggt
caggatggtatgcctggtcccccaggagtaaagggagaaccaggagcatcagggagagga
atccctggccttcaaggtattcctggtcgtagaggaatcaaaggggacatgggactgcct
ggttttcctgggccaccaggtatgaaaggtcatcagggtgatcaaggacccattggacct
cctggcttaccagggttacctggatttcaaggcacaacaggcattgcaattactggccaa
aaagggaatagaggtactgctggtgcagatggaagaccaggtgctcctggttttccaggg
cctcctggtctttccactcccagcatgaaaggaagcaaaggtgttagaggggcagatggc
attccagggccaacaggcccagccggcgacactggtcctcctggtccaaaaggaatagaa
ggtcaatcaggttatcctggtgctagaggggaccaaggatttcttggattcccaggtgta
aaaggagaaaagggtaatcaaggaccccctggaccacaaggtgcagaagggccaagggga
ccaaagggtcagcatggtgcacctggagtcactgggagaatattctccatcccaggaagc
aagggtcctcctggaccgccaggaatcccaggaacaccaggtgatcaaggaattgaaggg
attcctggactacaaggacttaaaggagtaaaaggtctaccaggaaggtttggtcttcca
ggtcaaccaggactgcctggtccaaaaggagacagaggatttccaggacaaagaggacaa
cccggactgattggctttccaggtctacaggggttacctggatcaccaggtactatcatt
gctggtccaacaagaagaggttttatctttacccgccatagtcaatcaacaaagattcct
tcatgcccacatgggacatcgcagatctatgttggctattcactgctttttgtacaagga
aatgaacgagcacatggacaagatcttggaacagctggtagctgcttgcagagatttaac
accatgccgttcctattctgtaacaccaatgatgtttgtagttttgcttctcgcaatgac
tattcgtactggctgtcaactgcagcagtaatgccagtagacatggcaccgatttctggc
agggcattagagccccatataagcaggtgtgttgtctgtgaaggagctgcaatggtaata
gcagttcacagccaaaccactgtagttcctgcatgtccagaaggctggatatctctctgg
aagggtttttcttttgttatgtatacaagtgccggctcagaagcttctggccaagcactg
gcatctcctggatcttgtttggaagaatttcgagccatcccattcatagagtgccacggc
agggggacgtgcaactactatacaaattcctacagtttctggttggcatcattaaatcca
agaagaatgttcaggaaacctctgccacagactttgaaagcaggagaactagaaaatatc
atcagccgttgtcaggtctgcatgaagagaccagcctaa
DBGET
integrated database retrieval system