Tyto alba (Barn owl): 116962515
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Entry
116962515 CDS
T07816
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
tala
Tyto alba (Barn owl)
Pathway
tala04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116962515 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tala04054
]
116962515 (DHX58)
Enzymes [BR:
tala01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116962515 (DHX58)
Pattern recognition receptors [BR:
tala04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
116962515 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_11
AAA_19
VMAP-M4
NmrA
AlaDh_PNT_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
116962515
NCBI-ProteinID:
XP_042643176
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MELRGYQREAVAPALRGLNSIIWLPTGAGKTRAAVHVCRRHLETRRGGKVAVLVNKVHLV
DQHAKKELHVLQDSFRVTAISGDSSHKSFFASVVKQSDVVICTAQILQNALLSGDEDTRV
ELTDFSLLVIDECHHTHKEAVYNKIMLNYLQRKLSGQQDLPQVLGLTASPGTGGATSFEG
AVEHILQICANLDTEKITSAQEEVQQLQSHVPQPRKQYDLCQERAQDPFGTRLKRMMEQI
QQHMETPGLPQDFGTQIYEQRIVELEKRAAETFCRKTRVCALHLRKYNDALLINDTVRMI
DAFQCLQQFYAAGRDAKDPTERFLAATFEENRPSLQALAGDRRYENPRLGKLEEILREHF
QPLGTSRGIVFTKTRQSAHSLLGWLQDTAALGGQHVRAAVLTGAGYSNQGRHMTQNEQQD
VIKLFREGALNLLFSTSVAEEGLDIPECNIVVRYGLMTNEIAMMQARGRARAKNSVYSVL
AKANSREVSRELLNEDLVELMERAIGAVQAMPEQEYRLKIRELQQAAVASWLMKEVRISK
RRRLHDPEAVYLYCVNCNLAVCRGTDIRTVEGMHHVNINPSFRLYYRVSSGKIEFQRTFK
DWEPGCRIACSECRQDWGMEMIYRQVKLPILCIKNFVVETPAEKRRYKKWSSVTFPIEEF
DYLDYCSSTHG
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgggggtaccagcgggaggccgtggccccggccctgcgcggccttaacagc
atcatctggctgcccacgggcgcggggaagacccgcgctgccgtccacgtctgccggagg
cacctggagacccgccgggggggcaaggtggccgtgctggtcaacaaggtgcacttggtg
gaccagcacgccaagaaggagctccacgtgctgcaggacagcttcagggtgacggccatc
agcggggacagcagccacaagtccttcttcgccagcgtggtgaagcagagcgacgtcgtc
atctgcacggcccagatcctgcagaacgcgctgctcagcggggacgaggacacgcgcgtg
gagctgacggatttctcgctgctggtgatagacgagtgccaccacacgcacaaggaagcc
gtctacaacaaaatcatgctgaattacctccagcgcaagctcagcgggcagcaggacctg
ccgcaggtcctgggcctgacggcatccccgggcaccgggggggcaacctccttcgagggg
gccgtggagcacatcctgcagatctgtgccaacctggacaccgagaaaatcacgtcggcg
caggaggaggtgcagcagctgcagagccacgtcccccagcccaggaagcagtacgacctg
tgccaggagagagcgcaggacccctttggcacgcggctgaagaggatgatggagcagatc
cagcagcacatggagacgcccggcctgccgcaggacttcggcacgcagatttacgagcag
cgcatcgtggagctggagaagagagcggcagagacgttttgtcgcaagacgcgggtgtgc
gccctgcacttgcgcaagtacaacgacgctttgctgatcaacgacacggtgcggatgatc
gacgccttccagtgcctgcagcagttctacgccgctgggcgggacgcgaaggaccccacc
gagcgcttcctcgccgccacgtttgaggagaacaggccgagcctgcaggcgctggctggg
gaccggcgctatgagaatcccaggctgggcaagctggaggagatcctgcgggagcacttc
cagcccctgggcacctctcgcggcatcgtcttcaccaagacgcggcagagcgcccacagc
ctgctcggctggctgcaggacacggccgcgctcggcgggcagcacgtcagggccgccgtc
ctcaccggcgccggctacagcaaccagggccggcacatgacgcagaacgagcagcaggac
gtgatcaagctgttccgcgagggagccctcaacctgctcttctccaccagtgtggccgag
gagggcctggatatccccgagtgcaacatcgtggtccgctatgggctgatgaccaacgag
attgccatgatgcaggcccggggccgtgcccgtgccaaaaacagcgtctactccgtcctc
gccaaagccaacagcagggaggtctctcgcgagctgctcaacgaggacctggtggagctg
atggagagggcgatcggagcggtgcaggccatgcccgagcaggagtatcgtctcaagatc
agggagctgcagcaagctgcggttgccagctggctcatgaaggaggtcaggatcagcaag
aggcggcggctgcacgacccggaggctgtttacctctactgcgtcaactgcaacttggcg
gtgtgccgcggcaccgacatccgcaccgtggagggcatgcaccacgttaacatcaacccc
agcttcaggttgtattacagggtttcctctgggaaaatagagttccagcggactttcaag
gactgggagccggggtgccgcatcgcatgcagcgagtgcaggcaggactggggaatggag
atgatctaccggcaggtgaagctgcccatcctctgcatcaaaaactttgtggtggagacg
ccagctgagaagaggaggtacaagaagtggagctccgtgacattccccatcgaggagttt
gactatctggactactgctccagcacccacggctag
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