Tyto alba (Barn owl): 116962982
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Entry
116962982 CDS
T07816
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116962982 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tala03019
]
116962982 (LSM1)
Messenger RNA biogenesis [BR:
tala03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116962982 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
116962982 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
116962982
NCBI-ProteinID:
XP_042657442
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIQDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQAKQESEKLKVQALKER
GLSVPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgcccggcacggccagcctcatccaggacatcgacaagaagcacctggtc
ctgctgcgggacggccggacgctcatcgggtacctgcgcagcatcgaccagttcgcaaac
ttggtgttgcaccagactgtggagcgcatccatgtgggcaagaagtacggggacatcccg
cgaggcatcttcgttgtgagaggagagaacgttgttctgcttggggaaatagacctggag
aaggagagtgacacgcctctgcagcaggtctccatcgaggagatcctggaggagcagcgc
gtggagcagcaggccaagcaggagtcagagaagctgaaggtgcaggcgctgaaggagcgg
ggcctctccgtcccacgggcagacaccctggacgagtattag
DBGET
integrated database retrieval system
