Tyto alba (Barn owl): 116963172
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Entry
116963172 CDS
T07816
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
tala
Tyto alba (Barn owl)
Pathway
tala04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116963172 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tala04121
]
116963172 (NHLRC1)
Enzymes [BR:
tala01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116963172 (NHLRC1)
Ubiquitin system [BR:
tala04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116963172 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
Prok-RING_4
RING_XB3-XBAT31
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
116963172
NCBI-ProteinID:
XP_042662745
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MAAEDEAELSLLECRVCFERYGPGGQRRPRNLPCGHVLCRGCVGALGGTERRRLECPFCR
RVCGSAETSDCLPLLQLLEVLGPAGGPSALGRSGGGEAGPAAAGLGLRLSLGGWGSLVNP
TGVAACRRSGRLAVAHDGKKRIHVFGPSGSCLQRFGERGDAGNDIKYPLDVTVTSDGHVV
VTDGGDRAVKAFDFEGRGVLAIREGFCLPWGLDATPESEVILTDSEAGALYRLTADFKKG
ELKKCQMIRSQLISPRGVAVSQTSGAIAVIEHLKAQGLNSSSTRVKIFSAEMDLVGQMDS
FGLNLVFPSKIYTTAVAFDKEGRVVVTDVCSQAVICLGKPEEFPIFNPLISHGLSYPVGL
TYMANNFLVVLDSGDHSVKIYSST
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggacgaggcggagctgagcctgctggagtgccgggtgtgcttcgagcgg
tacggccccggcgggcagcggcggccgcggaaccttccctgcgggcacgtcctctgtcgg
ggctgcgtgggggccctgggcggcaccgagcgccggcggttggagtgtcccttctgccgg
cgggtctgcggctccgccgagaccagcgactgcttgccgctgctgcagctgctggaggtg
ctgggtcccgccggcggcccctcggccttggggaggagcggcggaggggaggccgggccg
gccgccgcgggcctcgggctccggctgtccctggggggctgggggtcgctggtcaacccc
accggggtggctgcctgccgcaggtccgggcgcctggctgtggcgcacgacggcaagaag
aggatccacgtcttcgggccgagcggctcctgcctgcagcggttcggggagcggggggac
gccggcaacgacatcaagtacccgcttgatgtgacggtgacgtcggacgggcacgtggtg
gtcaccgatggcggagaccgcgccgtgaaggccttcgattttgagggccggggggtcctg
gccatccgggagggtttctgtttgccgtggggcttggatgccacccccgagagcgaagta
atcctgactgactcggaggcaggcgccctgtaccgcttgacggccgacttcaagaagggg
gaattaaagaagtgtcagatgatccggtctcagctcatcagcccaagaggggtcgcggtc
tcccagacctcgggtgctatcgccgtgatagagcacctgaaagctcaaggactgaacagc
agtagcacccgcgtgaagatattcagtgcggagatggatcttgttggccagatggatagc
ttcggtctgaacctcgttttcccctccaaaatatataccacggctgtggcctttgacaaa
gagggtcgtgttgtagtaacagatgtgtgcagccaggctgtaatatgcttagggaaacct
gaggagtttcccatctttaaccctctaattagccatgggctttcttatcctgtcggactg
acttacatggcaaacaatttcctcgtcgttttagacagcggtgatcattcagtaaagata
tatagctccacctga
DBGET
integrated database retrieval system
