KEGG   Tyto alba (Barn owl): 116963536
Entry
116963536         CDS       T07816                                 
Symbol
PTCH2
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 2
  KO
K11101  patched 2
Organism
tala  Tyto alba (Barn owl)
Pathway
tala04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:tala00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    116963536 (PTCH2)
SSDB
Motif
Pfam: Sterol-sensing TRA2_N Patched MMPL
Other DBs
NCBI-GeneID: 116963536
NCBI-ProteinID: XP_042663938
LinkDB
Position
Unknown
AA seq 1437 aa
MGAAVAAAANGSGGGGAAPAPPAPXLPFRGAAGGRRQHSPPHRHRHRHRHRHRHRHRPRR
PHGGRRARPHITGGGYPASPLAPAMPAEPPRSAPPLRAARRKPLPEGRAVGQRAPLWLRA
RFQALLFALGCRIQRHCGKVLFVGLLVFGALAVGLRVASIETDIEHLWVEAGSRVSQELR
YTKEKLGEESVYTSQMLIQTPKKDGENILTQEALQLHLEAALAASKVQVSLYGKSWDLNK
ICYKSGVPIIENGMIERMIEKLFPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWSNLDP
LQLMEELGQFTSLEGFKELLEKAEVGQAYMERPCLDPRDPQCPPSAPNKQSQQSPDIPAE
LSGGCHGFSRKFMRWQQELILGGTTKDSQGKLLRAEALQTMFLLMSPRQLFEHFKDDYEI
HDISWSEEKAGAILEAWQRKFVELAQDSIPPNATQSVHAFSTTTLNDIMKSFSDVSIIRV
AGGYLLMLAYACVTMLRWDCSKSQGAVGLAGVLLVALSVASGLGLCSLLGISFNAATTQV
LPFLALGIGVDDMFLLAHAFTETSQHIPFKERTGECLKRTGTSVALTSVSNMIAFFMAAL
VPIPALRAFSLQAAVVVVFNFAMVLFVFPAILSLDLHRREKRRLDILCCFYSPCSSRVIQ
IQPQELADANDNHACHPSPYGHPGVATSTQITTTVQAFTRCDPSGHHVVTVLPPTSQVCT
SPAVLLPPTDPLGSQVFAPSSSTRDLLAQLDEAKGGRECVPLPFCRWSLADFAREKYAPL
LLRTRTKVVVAVLFLGLLGLSLYGTTMVHDGLYLTDIVPRDTKAHAFISAQFKYFSFYNM
FIVTKGGFHYPGAQAALLSLHQAFSTVKYVVREGNHDLPKMWLHYFQDWLRGLQATFDRD
WQAGRITHDSYRNGSEDGALAYKLLIQTGNKKEPFNFNQLTTRRLVDENGIIPPDTFYIC
LTVWASNDPLGFAASQANFYPPPPEWIHDKYDTTGENLRIPAAQPLEFAQFPFYLSGLRR
TADFVEAIESVRAICREAAQRHGVLSYPSGYPFLFWEQYIGLRHWFLLAISILLACTFLV
CALLLLNPWTAGIIVSILAMMAVELFGIMGLMGIKLSAIPVVILIASVGIGVEFTVHVAL
GFLTAAGSRNVRSAAALEHTFAPVMDGAVSTLLGVLMLAGSEFDFIMRYFFAVLTILTLL
GLLNGLVLLPVLLSVIGPPPEASQADNSPHLPPREPVPPCLGPGGLYVRCAPAWPATFPD
PSDTERYAEGVGPGSPRGPFIVPPAPAHILLEAGKDPSFPHITVLKPYKDSPDVRGKKEA
PSLQPAPPLPFGEPCPTLPRDNPQPCPLGARPAPPTALPTYSTHLQGPASSYTTVTATAS
VTVALHPTLPGSYPNFSPEGFAAGERDCLEEPSAGGTAVPDTFEMQSMGRRGAGARR
NT seq 4314 nt   +upstreamnt  +downstreamnt
atgggcgctgccgtggcggcggcggccaatgggagcggcggcggcggcgcggccccggcg
ccccccgcccccngcctcccctttagaggcgcggcgggcggccggcggcaacacagccct
ccgcaccggcaccggcaccggcaccggcaccgccaccgccaccggcaccggccccgccgc
ccgcatgggggccgccgcgctcggccccacataacggggggggggtacccagcctcgcca
ctcgcccccgccatgccggccgagcccccccgctccgcgccgccgctccgcgccgcccgc
cgcaagccgctgcccgagggcagggccgtgggccaaagggccccgctgtggctgcgggcc
cgctttcaggcgctgctcttcgccctgggctgccggatccagcggcactgcgggaaagtg
ctcttcgtggggctgctggtgttcggggcgctggccgtggggctgcgggtggcctccatc
gagaccgacatcgagcacctctgggtggaagcaggcagccgggtgagccaggagctgcgc
tacaccaaggagaagctgggcgaggagtctgtctacacctcccaaatgttgatccaaacc
ccgaagaaggacggggagaacatcttgacgcaggaggccctgcagctccacctcgaggcg
gccttggctgccagcaaagtccaagtctcgctgtatggaaaatcgtgggatttgaacaag
atctgctacaagtcgggtgtccccatcattgagaacggcatgattgagaggatgatagag
aagctgttcccctgtgtgatcctgacgccactggactgcttctgggaaggcgccaagctg
cagggaggctcagcatacctcccaggccgcccggacatccagtggagcaacctggaccct
ctgcagctgatggaggagctggggcagttcacatccctggaaggtttcaaagagctgctg
gagaaggcagaggtggggcaagcttacatggagcggccctgtctggacccccgggatcct
cagtgccctcccagtgcccccaacaagcagagccagcagagccccgacatcccagccgag
ctctcggggggctgccacggcttctccaggaagttcatgcgctggcagcaggagctgatt
ttaggtggcacgaccaaagactcccagggcaagctgctacgtgccgaggccctgcagacc
atgttcctcctcatgagcccccggcagctctttgagcacttcaaggatgactacgagatc
catgacatcagctggagtgaggagaaggcgggtgccatcctggaggcctggcagaggaaa
tttgtggagctggcacaggactccatcccgcccaacgccacgcagagcgtccatgctttc
tccaccaccacgctcaacgacatcatgaagtccttctccgacgtcagcatcatccgggtg
gccgggggctacctcctcatgctggcctacgcctgcgtcaccatgctgcggtgggactgc
tccaagtcccaaggggccgtgggcctggccggggtcctgcttgtggctctctccgtggcc
tctggcctgggcctttgctcactgctaggcatctccttcaacgcagccaccacccaggtc
ctgcccttcctggcccttggcatcggtgtggacgacatgttcctcttggctcacgccttc
actgagaccagccagcacattcccttcaaggagcgaacgggcgagtgcttgaagcgcacg
ggaaccagtgtggctctcacctccgtcagcaacatgatcgccttcttcatggcagctctg
gtgcccatccctgccctgcgcgccttctccctccaggctgcggtggttgtggtgttcaac
tttgccatggtgctgtttgtcttccctgccatcctgagcctggacctgcaccgccgggag
aaacgccggcttgacatcctctgctgcttctatagcccttgctcctcacgggtcatccag
atccaacctcaggagcttgccgatgccaacgacaaccatgcctgccacccgtctccttac
ggacaccctggtgtggccaccagcacccagatcaccaccaccgtgcaagctttcacccgg
tgcgacccgtcgggccaccacgttgtcaccgtcctgccacccacctcccaggtgtgcacc
tcgcccgctgtcctcctgcctcccaccgaccccctgggctcgcaggtcttcgccccgtcc
agctccacccgggacctgctggcccagctggatgaggccaagggcgggcgggagtgcgtc
cccctgcccttctgccgctggagcctcgctgactttgcccgggagaagtacgccccgctc
ctcctgcggacccggaccaaggtggtggtggcagtgctgttcctggggctgctggggctg
agcctctacggcaccaccatggtgcacgacgggctctacctgacggacatcgtaccgcgg
gacaccaaggcacacgccttcatctcggcccagttcaagtacttctccttctacaacatg
ttcattgtcaccaagggcggcttccactacccgggcgctcaagccgccctgctcagcctg
caccaggccttcagcaccgttaagtacgtggtgcgggaaggcaaccatgacctgcccaag
atgtggctccattacttccaggactggctgcgagggctccaggccaccttcgacagggac
tggcaagccgggcgcatcacccatgacagctaccgcaatggctccgaggacggggcgctg
gcgtacaagctcctaatccagactggcaacaagaaggagcccttcaacttcaaccagctg
accacgcggcggctggtagacgagaatggcatcatcccccctgacaccttctacatctgc
ctgaccgtgtgggccagcaacgaccccctgggcttcgccgcctcccaggccaacttctac
ccgccgcctcccgagtggatccatgacaagtacgacaccacgggcgagaatctgcgaatc
ccagcagcccagccactggagttcgcccagttccctttctacctgagtgggctgcgtcgc
acggctgactttgtggaggcgattgagagtgtgcgggccatctgccgggaggccgcccag
cgccacggggtgctgagctaccccagcggctaccccttcctcttctgggagcagtacatc
ggcctgcgccactggttcctgctggccatcagcatcctgctggcctgcaccttcctcgtc
tgcgccctgctgctgctcaacccctggacggccggcatcatcgtctccatcctggccatg
atggcagtggagctgtttggcatcatggggctgatgggcatcaagctgagtgccatccct
gtggtcatcctcatcgcctcggtgggcatcggtgtggagttcactgtccacgtggccctg
ggcttcctgacagccgcggggagcaggaacgtgcgctcggccgcagcactggagcacacc
tttgcccccgtgatggatggtgcagtctccaccctcctaggcgtcctcatgttggccggc
tccgagtttgacttcatcatgaggtacttctttgcggtgcttaccatcctgacgctgctg
gggctgctcaacgggctggtgctgctgccagtcctgctttccgtcattggaccaccccct
gaggcatcccaggcggataacagcccccacctgcccccacgggagccggtgcccccgtgc
ctgggtccgggggggctgtatgtccggtgtgccccagcctggcctgccaccttccctgac
ccctcagacacggagcgctatgcagagggtgtggggccaggcagcccccggggacccttc
atcgtgccccctgccccagcacacatcctgctggaggctggcaaggaccccagcttcccc
cacatcactgtgctgaagccctacaaggacagcccggatgtccgggggaagaaggaggct
cccagcctgcagcctgcaccccccttgccctttggggagccgtgccccacactgccccga
gacaacccgcagccctgcccgctgggcgcccggccagcaccccccacagccctgcccacc
tacagcacccacctgcagggtcccgccagcagctacaccactgtcacagccaccgcttcg
gtgacggtggccctgcaccccacgctgcctggctcctaccccaatttcagccccgagggc
tttgccgctggcgagcgggactgcctggaggagcccagcgccggtggcactgccgtgccc
gacaccttcgagatgcagagcatgggacgccgcggggcaggcgcccggcgctag

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