Tyto alba (Barn owl): 116965193
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Entry
116965193 CDS
T07816
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
tala
Tyto alba (Barn owl)
Pathway
tala04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116965193 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tala04121
]
116965193 (TRIM54)
Ubiquitin system [BR:
tala04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116965193 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-RING_5
zf-B_box
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
CYP38_PsbQ-like
Prok-RING_4
RHH_9
Zn_ribbon_FGT1_2
UvrD_C
CagA
FlgN
Motif
Other DBs
NCBI-GeneID:
116965193
NCBI-ProteinID:
XP_042659239
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MNFAVGLKPLLAEARSMESLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSSAVPSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESARPLHAKA
EQHLMCEEHEDERINIYCLRCEAPTCSLCKVFGAHKDCEVAPLPAVYQRQKVSGPGGGKL
ARGSGGAACPTDPHTLPIPPQSELSDGIAMLVAGNDRIQAIITQMEEICRTIEDNGRRQK
QHLGLRFDSLYSILEERKKELLQSIAREQEAKVQRVRGLIRQYGDHLEASSKLVESAIQA
MEEPQMAVYLQHSKELLKKITDMSKVSMSSRPEPGYENMDHFSINVDYVAEMLRTIEFQT
EPLGEDEADGPGDGSEAVADEDRLDSLEVPEAVEDVGPRQKPASSLHGQH
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcggtgggactgaagccgctgctggcggaggcgcggagcatggagagcctg
gagaagcagctcatctgccccatctgcctggagatgttcaccaagcccgtggtcatcctg
ccctgccagcacaacctctgccgcaaatgcgccaacgacgtcttccaggcctccaacccg
ctgtggcagtcgcggggctccagcgcggtgccgtcggggggccggttccggtgcccgtcg
tgccgccatgaggtggtgctggaccggcacggggtgtacgggctgcagcggaacctgctg
gtggagaacatcatcgacatctacaagcaggagtcggccaggcccctgcatgccaaggcc
gagcagcacctcatgtgtgaggagcacgaggatgagcgaatcaacatctactgcctgcgc
tgcgaggcgcccacctgctccctctgcaaggtcttcggggcgcacaaggactgcgaggtt
gcgccgctgcccgccgtctaccagcgccagaaggtgagtggccccgggggagggaaactg
gcaaggggctctgggggggctgcctgcccaacggaccctcacacccttcccatcccaccc
cagagcgagctcagcgacggcattgccatgctggtggcggggaacgaccgcatccaggcc
atcatcacgcagatggaggagatctgccgcaccatcgaggacaatggccggcggcagaag
cagcacctggggctgcgcttcgactcgctgtacagcatcctggaggagcggaagaaggag
ctgctgcagagcattgcgcgggagcaggaggcaaaggtgcagcgcgtgcggggcctcatc
cgccagtacggcgaccacctggaggcctcctccaaactggtggagtcggccatccaggcc
atggaggagccccagatggccgtgtacctgcagcactccaaggagctcctgaaaaagatc
acggacatgtccaaggtgtcgatgagcagccgcccggagcctggctacgagaacatggac
cacttctcgatcaacgtggactatgtggcggagatgctgaggaccatagagttccagaca
gagccactgggtgaggatgaggcggacggaccgggggacggcagtgaggctgtggcagat
gaggaccggctggacagcctggaggtgcccgaagccgtggaggatgtggggccgaggcag
aagccggcgagctctctccacggtcagcactga
DBGET
integrated database retrieval system
