Terriglobus albidus: FTW19_06860
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Entry
FTW19_06860 CDS
T06135
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
talb
Terriglobus albidus
Brite
KEGG Orthology (KO) [BR:
talb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
talb03016
]
FTW19_06860
Enzymes [BR:
talb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
FTW19_06860
Transfer RNA biogenesis [BR:
talb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
FTW19_06860
Prokaryotic type
tRNA splicing ligases
FTW19_06860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QEE27739
UniProt:
A0A5B9E7J4
LinkDB
All DBs
Position
1706206..1707387
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AA seq
393 aa
AA seq
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MQLVDNIPVWGKHEENTLEQAKVCARHADYMALMADGHLGYGVPIGGVIASEGRISPTAV
GFDIACGNKAVRLDIPGSEVRQNIARIMDDVWNTLSFGVGRRNNEDVDHAIFAKDGHPGW
DTDAAKPLKRKAQAQLGTIGSGNHYVDLFVDEQDRAWVGVHFGSRGLGHGIATWFLKAAG
AKDGMMVDPVFLDVTSDLGAQYVAAMQLGGAYAYAGRDWVCGRVARMLGANVVEEVHNHH
NFAWLEEHGGKQMWVCRKGATPAFPGQKGFVGGTMGEQSVILEGVDSPDSKTALYSTVHG
AGRVMGRKQAAGVYDRKTGVCKRPGLVTPQMMQEWLQASGVVLRGGGLDESPHCYKRLHE
VIAEHGDTVRVLHTLTPLGVAMAGANEFDPYKD
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcagttggtagataacatcccggtatggggaaagcatgaagagaacacgctggagcag
gcaaaggtctgtgcccgccacgcagactatatggccctgatggccgatggccatctcggt
tacggcgtgccgatcggcggagtgatcgcaagcgagggccgtatcagccctacggctgtt
ggattcgatatcgcgtgcggaaacaaagccgtgcgtctggatattccgggcagtgaagtg
cggcagaacatcgcgcgcatcatggatgacgtgtggaatacgctctccttcggtgttggc
cgcaggaacaacgaggatgtggatcatgcgatcttcgcgaaggacggccatccgggctgg
gataccgacgccgcgaagcctctgaagcgtaaggcgcaggcacagttgggcaccatcggc
agcggcaaccactacgtcgatctgtttgtcgacgagcaggatcgcgcgtgggttggtgtg
cacttcggctcgcgtggcctgggtcacggcattgcgacctggttcctgaaggctgcgggc
gcgaaggacggcatgatggttgatcctgtctttctggacgtgaccagtgatctaggagcg
cagtatgtcgccgcgatgcagttgggcggagcctatgcgtacgcagggcgtgactgggtg
tgcggccgtgtggctcgcatgctgggtgcgaacgtggtggaagaggtccataaccaccac
aacttcgcctggctggaagagcacggcggcaagcagatgtgggtctgccgcaagggcgcc
acgcctgcgtttccgggacagaagggcttcgtcggcggcacgatgggagagcagtcagtg
attctggagggtgtggactctccggactcgaagacggcgctgtactccaccgtgcacggc
gcgggccgcgtgatgggccgtaagcaggctgccggtgtgtacgaccgcaagaccggggtg
tgtaagcgtcccgggctggtgacgccgcagatgatgcaggagtggctgcaggcatccggt
gtggtgctgcgtggcggagggctggatgaaagtccgcactgctacaagcgtctgcacgag
gtgatcgcggaacatggcgacacggtgcgtgtgctgcatacgctgactccgctgggcgtg
gccatggcgggagcaaacgagtttgatccgtacaaggattga
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