Terriglobus albidus: FTW19_25105
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Entry
FTW19_25105 CDS
T06135
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
talb
Terriglobus albidus
Brite
KEGG Orthology (KO) [BR:
talb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
talb03009
]
FTW19_25105 (rlmD)
Enzymes [BR:
talb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FTW19_25105 (rlmD)
Ribosome biogenesis [BR:
talb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FTW19_25105 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
RrnaAD
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
QEE30993
UniProt:
A0A5B9EFL8
LinkDB
All DBs
Position
complement(6281554..6282840)
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AA seq
428 aa
AA seq
DB search
MKLRIEKAIYGGNGLARMTEGEQAGKAVFVPFALPGEVVDAGVRASKKGFSEAELLSVLE
PAPERVVAPCRHFGVCGGCQYQHAAYEAQLAMKRGILRETLERAGVRQLPEITVHSAASW
HYRNRIRLRCENNRLGYNRRGSHVFLPIAECPIAAPLLWQAAQTLMELPLEGIAEVELFT
DASESKLQLTLLAAKPIASQRLARLSEALQAKVPQLIGASVVQADRDQRGHRGQPDESVE
GHVAAQWGEPSLPYAAAGQSYRVQAGGFFQVNRFLIDTMVSLVTADRSGQHAWDLYAGAG
LFTAALMPRFAQVTAVEIGEASFRELSSLVTAPHRALRATTAEFLRRGKLQTPDLVVVDP
PRAGLGAEVVERLGALQARQIVYVSCDPATFSRDAAGLLQSGYTLAELHLVDMFPQTFHL
ETVTVFER
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcgcatcgagaaggccatctacggcggcaacggtctcgcccgcatgaccgaa
ggtgagcaggcgggtaaggccgtcttcgttcccttcgctcttcccggcgaagtagtggat
gccggcgttcgcgcatcgaagaaaggtttttccgaggcggaattgctctccgtgcttgag
cccgcgccggaacgcgttgtcgcaccgtgccgtcacttcggcgtatgcggcggatgccaa
tatcagcatgccgcctacgaggcgcagctggccatgaaacgcggcatcctgcgcgagacc
ctggagcgcgcaggtgtacgccagcttcctgagatcaccgtccactccgccgcctcatgg
cactatcgcaaccgtattcgcctgcgctgcgagaacaaccggctcggctacaaccgtcgc
ggatcgcatgtctttctaccaattgcagagtgccctatcgccgcgcccctgttgtggcag
gcagcccagacgctgatggaacttccgctggaaggcattgccgaagtggagctgtttact
gatgcctctgaaagcaaactacaactcactctgcttgccgcaaagcccatcgcgtcacag
cgtctggcgcggctcagtgaagcattgcaggcgaaggtgccgcagctcatcggagccagt
gttgtgcaggccgatcgtgaccagcgcggacatcgcggtcagccggatgagtcggtggaa
ggccacgttgcggcacagtggggtgagccctctctgccgtacgcagcggcaggtcagagc
tatcgtgtccaggcaggcggcttcttccaggtgaaccgttttctcatcgacacgatggtc
tctctggtgacagcagatcgtagcgggcagcatgcatgggatctctacgccggcgccggt
cttttcacggctgcactcatgccgcgtttcgcgcaggtaacagccgtcgagatcggcgag
gccagcttccgcgagctgtcatcgctggtgaccgcgccgcatcgtgcccttcgcgctaca
acggcagagtttctgcgccgcggcaaactgcagacgccagatctggttgttgtggacccg
ccccgtgcgggtctgggggcagaggtcgtcgagcggctcggcgccttacaggcacgacag
atcgtctacgtctcctgcgatcctgcaaccttctcgcgcgatgcagccggactgctacaa
tccggctacacgttagccgagctgcatctcgtggacatgtttccccagacatttcatctg
gagacggttaccgtcttcgagagatag
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