Thermoleophilum album: JDY09_02770
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Entry
JDY09_02770 CDS
T08835
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
talu
Thermoleophilum album
Brite
KEGG Orthology (KO) [BR:
talu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
talu03016
]
JDY09_02770
Enzymes [BR:
talu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
JDY09_02770
Transfer RNA biogenesis [BR:
talu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
JDY09_02770
Prokaryotic type
tRNA splicing ligases
JDY09_02770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WDT94193
LinkDB
All DBs
Position
605341..606783
Genome browser
AA seq
480 aa
AA seq
DB search
MGASEPSLRRIDPTTWEIPRDPRRGMRVPARVIADGELLAEIRGDESLEQLRNVATLPGI
VEAAIAMPDIHQGYGFPVGGVAAMDVDDGVVSPGGVGYDINCGVRLLALPLAADELDAPT
KERLMDELFRTVPVGTGSGGGIDLGAAQLDRVLREGPRALLARGVGVEADVECCESNGRL
DGADPAAVSPRARQRGAGQLGTVGSGNHFVELQSVERIVAPEAARALGLAEGQLTVLIHS
GSRGLGHQVCSDYVRTMDSVIARYGIRLPDRQLACAPISSPEGRAYLAAMAAAANFAWAN
RHAIAHRVRSALRRVLGAGVAEGTTTIYDVAHNVAKFERYRGRRLLVHRKGATRAFPAGS
SEIPSRYRSCGQPVFIPGSMGTASWVLVGAPGAVQRTFGTTCHGAGRRLSRTRARRQIHG
RELARQLGERGIAVRAASARGLAEEAPFAYKEVDRVVEVVERAGIARRVARLVPIGVVKG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcctccgagccgagcctgcgccggatcgatccgacgacctgggagataccgcgc
gacccgcgccgcggcatgcgcgttcccgcacgcgtgatcgccgacggcgagctgcttgcc
gagatccgcggcgacgagtcgctcgaacagcttcgcaacgtcgcgacgctgcccggcatc
gtcgaggcggcgatcgccatgcccgacatccaccagggctacggctttcccgtcggtggc
gtcgcggcgatggacgtcgacgatggagtggtgtcgcccggtggtgtcggctacgacatc
aactgcggcgtgcggctgctcgcgttgccgctcgccgccgacgagctcgacgcgccgacc
aaggaacggctgatggacgagctctttcggacggtgccggtcgggacgggctcgggcggc
gggatcgacctgggcgctgcgcagctcgatcgcgtgctgcgcgaagggccgcgcgctctc
ctcgcgcgcggcgtcggcgtcgaggccgacgtcgagtgctgcgagtcgaacggtcggctc
gacggcgccgaccccgccgcggtttcgccccgtgcccgccagcgtggggccgggcagctg
gggacggtcggctcgggcaaccacttcgtcgagctgcagagcgtggagcgcatcgtggcg
cccgaagcggcgcgcgcgctcgggctcgccgaaggccaactgacggtcttgattcactcg
ggatcgcgcggcttgggacaccaggtgtgcagcgactacgtgcgcacgatggacagcgtc
atcgcccgctacggcatccgactgcccgaccgccagctggcgtgcgcgccgatctcctcg
cccgaaggccgcgcctacctggccgcgatggccgccgccgcgaacttcgcctgggcgaac
cggcacgcgatcgcgcaccgcgtgcgatcggcgctgcgacgcgtgctcggtgccggggtg
gccgaaggcacgaccacgatctacgacgtggcgcacaacgtcgccaagttcgagcgctac
cgcggccggcggctgctcgttcaccgcaagggcgcgacccgcgcctttcctgccggctcg
agcgagatcccgagccgctaccgcagctgcggccagccggtcttcatccccggcagcatg
ggcaccgcgagctgggtgctggtcggggcgccgggcgcagtccagcgcaccttcggaacc
acctgccacggcgccggccgccggctcagccgcacccgcgcccgccgtcagatccacggt
cgcgagctcgcgcgccagctcggcgaacgcggcatcgccgtgcgcgccgcctcggcgcgc
ggtctcgccgaggaggcgcccttcgcctacaaggaggtcgatagggtcgtagaggtagtc
gaacgcgccgggatcgcgcgccgtgtcgcgcggctcgtgccgatcggcgtcgtgaaaggg
tga
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