Thermoleophilum album: JDY09_04270
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Entry
JDY09_04270 CDS
T08835
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
talu
Thermoleophilum album
Pathway
talu03030
DNA replication
talu03430
Mismatch repair
talu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
talu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JDY09_04270 (dnaE)
03430 Mismatch repair
JDY09_04270 (dnaE)
03440 Homologous recombination
JDY09_04270 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
talu03032
]
JDY09_04270 (dnaE)
03400 DNA repair and recombination proteins [BR:
talu03400
]
JDY09_04270 (dnaE)
Enzymes [BR:
talu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JDY09_04270 (dnaE)
DNA replication proteins [BR:
talu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JDY09_04270 (dnaE)
DNA repair and recombination proteins [BR:
talu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JDY09_04270 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WDT94473
LinkDB
All DBs
Position
919900..923529
Genome browser
AA seq
1209 aa
AA seq
DB search
MAQPSFAHLHVHSEYSLLDGACRIEQMAERAAAFEQPALGLTDHGVLNGAVEHYQACHKH
GIKPILGLEAYLVDDIKSEALRYERNHLTLLAATDEGFRNLVKLSSAGFLEGYKRGKANV
DLDLLERHAAGVIVLTGCLQSRFCRRLVADDVAAARAHVDDLLQIFGSDNVYFEIQRNGL
DAQEKANEGIVRIAREVGRPLVATADVHYLRREDYDNHQALLCVQTKSTLANPKLRFETN
EFYLKDSQEMQAAFRDLPEAVAATLEIAERCNVDIELGRLLLPRFPTPDGRSEAEYLREL
AAAGLRKRYGDPPPAEARERLEYELDVIERMGFSAYFLIVWDFVRFAKQNGIAVGPGRGS
AAGSIVSYCLEITDVDPLAYDLLFERFLNPERVSMPDIDIDFSVKGRERVIEYVAQKYGR
DRVAQIITFGRMLPRAATRDAARVLGYDYATGDRLAKLIPEPVMGRTKSFDEYLAEEPDL
RRAYETEPDARRIIDTARGLEGIVRNNSIHAAAVVIADRPLTEIVPLQLAEDTRGGERRY
RVVTQYSMKPLEEIGLLKMDFLGLRNLDVIESALDIIEESTGQRPDMAKLPLDDRKTYEM
LARGDSIGVFQFESEGMREALRKVRPTEFNDLVALVALYRPGAMRHIDTYARNKRNPEAV
EYLDERLRPITESTYGVILYQEQSMQIAKEIAGFSGAEADDLRKAIGKKLRDKMAQLKDR
FVEGARKTGTDERVIQELWAANEAAADYSFNRSHAACYALISYRTAWLKANYPAEYMAAL
ISSVMQTKDKVPFFVAQCDEMGIEVLPPDVNESGHDFRVIHEPGNDRPGKIRFGLDAVKN
VGSQAVDAIIRAREQGGPFRSIWDFCRRVDHRAVNKKAIEALIKCGALDSTGATRSGMLS
VLAQAQAAGQKHQQDAQLGQASIFDLGDAGGDAPAASDDPPVPALADAQDQINQWEKETL
GLFLSSHPLKELRPALRLASDCSLAELASRRDGEVVTVVGMVTERKRIRTKSGEPMVFCT
IDDLEGQVEVLVMGSCYQQHGELIEPDRVLLVRGRVDHKEAGETKLIAQEISAFEPSPEE
VERARRELADDAVGEGAASGPANAPGGDSARGRNGANGSASASGRRNGSAGRNGARPRGA
DALELELRDVPRSAIEELREILSHHPGDREVRVRVGGRVLVLGDKWRVSGNSSCCAELAT
LEGLAIVRA
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagccgtcgttcgcgcatctgcacgtccactccgagtactcgctgctcgacggg
gcctgtcgcatcgagcagatggcggagcgcgcagcagcgttcgagcagccggcgctcggt
ctcaccgaccacggggtgctcaacggtgccgtcgagcactaccaggcgtgccacaagcac
gggatcaagccgatcctcggtctcgaggcgtatctcgtcgacgacatcaaaagcgaagcg
ctgcgctatgagcgcaaccacctgacgctgctcgccgccaccgacgaggggttccgcaac
ctcgtcaagctgtcgtcggccggctttctcgagggttacaagcgcggcaaggcgaacgtc
gacctcgacctgctcgagcgccacgccgccggcgtgatcgtcctcaccggttgtttgcag
tcgcgcttctgccgccgcctcgtcgccgacgacgtggcggcagcgcgcgcccacgtcgac
gatctgctccagatcttcggcagcgacaacgtctacttcgagatccagcgcaacgggctc
gacgcgcaggagaaggccaacgaggggatcgtgcgcatcgcgcgcgaggtcgggcggccg
ctagtggcgaccgccgacgtccactacctgcgccgcgaggattacgacaaccaccaggcg
ttgctgtgcgtgcagacgaaaagcacgctcgccaaccccaagctgcgcttcgagacgaac
gagttctatctcaaggactcacaagagatgcaggccgccttccgcgatctccccgaggcg
gtcgccgccacgctcgagatcgccgagcgctgcaacgtcgatatcgagctcggccgcctg
cttttgccgcgttttccgacccccgacgggcgcagcgaagcggagtacctgcgcgagcta
gctgcagccgggttgcgcaagcgctacggcgacccgccgcccgccgaggctcgggagcgc
ctcgagtacgagctcgacgtgatcgagcgcatgggcttcagcgcctacttcctaatcgtc
tgggacttcgtccgtttcgccaaacaaaacggcatcgcggtcggtcccggccgcgggtcc
gcagccggctcgatcgtctcgtactgcctcgagatcaccgacgtcgatccgctcgcctac
gacctcctgttcgagcgcttcctcaaccccgagcgggtgtcgatgcccgatatcgacatc
gacttctcggtgaaggggcgggagcgcgtgatcgagtacgtcgcgcagaagtacgggcgc
gaccgcgtcgcccagatcatcaccttcggccgcatgctgccgcgcgccgccacacgcgac
gcggcgcgcgtgctcggttacgactacgccaccggcgaccgcttggcgaagctgatcccc
gagccggtgatgggccgcaccaaaagtttcgacgagtacctagccgaggagcccgatctg
cgccgcgcgtacgagaccgagcccgacgcccgccgcatcatcgacaccgcgcgcggcctc
gaggggatcgtgcgcaacaactcgatccacgccgccgcggtggtgatcgccgaccgtccg
ctcaccgagatcgtcccgctccagctcgccgaggacacgcgcggcggcgagcgccggtac
cgcgtcgtgacgcagtactcgatgaagccgctcgaggagatcggccttttgaagatggac
ttcctcgggctgcgcaacctcgacgtgatcgagtcggcgctcgacatcatcgaggagtcc
accggccagcggccggacatggcgaagctgccgctcgacgatcgcaagacctacgagatg
ctcgcgcgcggcgactcgatcggcgtcttccagttcgagtcggaagggatgcgcgaagcg
ttgcgcaaggtgcgtcccaccgagttcaacgacctcgtcgcgctcgtcgcgctctaccgc
ccgggcgcgatgcggcacatcgacacctacgcgcgcaacaaacgcaaccccgaggcggtc
gagtacctcgacgagcgcctgcgcccgatcaccgagtcgacctacggcgtgatcctctac
caggagcagtcgatgcagatcgccaaggagatcgccgggttctcgggcgccgaggccgac
gatctgcgcaaggcgatcggcaagaagctgcgcgacaagatggcgcagctcaaggaccgc
ttcgtcgagggcgcacgcaagacgggcaccgacgagcgcgtgatccaggagctgtgggcg
gccaacgaggctgcggccgactactccttcaaccgctcgcacgccgcctgctacgcgctg
atctcctaccgcacggcttggctcaaggccaactacccggctgagtacatggcggcgctg
atctcgtcagtgatgcagaccaaggacaaggtgccgttcttcgtcgcccagtgcgacgag
atgggcatcgaggttctgccccccgatgtcaacgagtcgggccacgacttccgcgtcatc
cacgagcccgggaacgaccggccgggaaagatccgtttcggactcgacgctgttaagaac
gtcgggtcgcaggcggtcgacgcgatcatccgcgcgcgcgaacagggcggaccgttccgc
tcgatctgggacttctgtcgccgtgtcgatcaccgcgcggtgaacaaaaaagcgatcgag
gccctcattaagtgtggggcgctggactcgaccggtgccacgcgcagcggcatgctctcg
gtgctcgcgcaagcccaggccgccggccagaagcaccagcaggacgcgcagctgggtcag
gcgtcgatcttcgatctcggcgacgccggcggggatgcgcccgccgcaagcgacgacccg
ccggtgccggcgctcgccgacgcgcaggatcagatcaaccagtgggagaaggaaacgctc
ggcttgtttttgtcgagccaccccctgaaggagctgcgtcccgcgctgcggctagctagc
gactgctcgcttgccgagcttgcgtcgcgccgcgacggcgaggtcgtcaccgtcgtcggg
atggtcaccgagcgcaagcgcatccgcaccaagagcggcgaaccgatggtcttctgcacg
atcgacgatctcgaaggccaggtcgaggtgctcgtgatgggctcttgctatcagcagcac
ggcgagctgatcgagcccgaccgcgtgctgctggtgcgcgggcgcgtcgaccacaaagag
gccggcgagacgaagttgatcgcgcaggagatcagcgcttttgagccctcgcccgaagag
gtcgagcgagcccggcgcgagctcgccgacgatgccgtcggggagggggccgcgagcggg
ccagcgaacgcgcccgggggcgacagcgctcgtggcagaaacggcgcgaacggcagcgcc
agcgcgagcggacgtcgcaacggcagcgcgggcaggaacggcgcacggccacgcggcgct
gacgcgctcgagctcgagctgcgcgacgtgccgcgcagcgcgatcgaggagctgcgcgag
atcctctcgcaccatccgggcgaccgcgaggtgcgcgtgcgcgtcggcgggcgcgtgctc
gtgctcggcgacaagtggcgtgtgtccggcaacagcagttgttgtgccgagctcgcgacg
ctcgagggtctggcgatagtccgcgcctga
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