Thermoleophilum album: JDY09_06000
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Entry
JDY09_06000 CDS
T08835
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
talu
Thermoleophilum album
Pathway
talu03030
DNA replication
talu03410
Base excision repair
talu03420
Nucleotide excision repair
talu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
talu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JDY09_06000 (polA)
03410 Base excision repair
JDY09_06000 (polA)
03420 Nucleotide excision repair
JDY09_06000 (polA)
03440 Homologous recombination
JDY09_06000 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
talu03032
]
JDY09_06000 (polA)
03400 DNA repair and recombination proteins [BR:
talu03400
]
JDY09_06000 (polA)
Enzymes [BR:
talu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JDY09_06000 (polA)
DNA replication proteins [BR:
talu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JDY09_06000 (polA)
DNA repair and recombination proteins [BR:
talu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JDY09_06000 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JDY09_06000 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
TopoV_HHH
HHH
Motif
Other DBs
NCBI-ProteinID:
WDT92948
LinkDB
All DBs
Position
complement(1276341..1279007)
Genome browser
AA seq
888 aa
AA seq
DB search
MAGNGTRELVLIDGNSLAYRAFFALPEDLATSRGEPTNAIFGFASMLVKLVQEHGLQPTL
VVWDGGTSGRAELYDDYKAQRDETPDLLQQQLPALPEIVEAFGFRNLRVDGYEADDVIAT
IARRAASAGLDVLVVTGDRDLFQIVDDRIRVLATARGITETKLYDRDAVVARYGIPPELV
PDFVGLKGDTSDNIPGVPGIGEKTAAELLQRFGSLEEVLARVDEVSGTKRRENLRAHAED
ARVSKQLATVVDTVPVELDPAALAPPEPHRGRLREAFMRFELREPLRRLEEALGPLGEGA
AGDAPQDEAGIAVATEAVPLPELRERAGAMGPLAVAVADDGSDSELAVAAWTGNGPVAVA
TAESADALLFALDGASVAAHDWKPLLRRASDPRLGPRLVHDTRIAAWLLDSLRRRYELEE
LAQAAGIAVRVDEAPRPATPGKDNEEDGGGDEERRARRNAVARAAALTALLAEHQRAELE
RAGLAQLFADVELPLVPIIAAMERAGIKLDVAELERVSEGLAERIAELEREIWELAGERF
TIGSPQQLARILFEKLGLSRKRRGKTGFSTDARVLQQIRHEHPIVPLIESWRELTKLKST
YIDTLPSYVGPDGRLHTTFNQTGTATGRLSSTNPNLQNIPIKSELGKGIRAAFVAEPGWV
LVSADYSQVELRLLAHIAGEERLKEFFRAGVDVHSATAAEILGTDPDKADAATRSKAKMV
NYGIVYGLSAFGLADRLNIPREEAQEFIDRYFERFPAIRAFIDRTIEQARREGQVRTLFG
RVRRIPELASRQWQTQQLGERLAVNMVIQGTAADVMKVAMVRCDRALREERLRARLVLQI
HDELLFEAPAAEAEALAAIVRREMVAALPIDPPLAVDVGVGRNWLEAK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
gtggctgggaacggcacgcgcgagcttgtcctgatcgacggcaacagcctcgcgtaccgt
gcctttttcgccttgcccgaagatctcgcaacgtcgcgcggcgagccgaccaacgcgatc
ttcgggttcgcgtcgatgctcgtgaagctcgtccaggagcatggcttgcagccgacgctg
gtggtgtgggacggcggcacgtcgggacgcgccgagctctacgacgactacaaagcgcag
cgcgacgaaacgccggaccttttgcaacagcagctgccggcgctgcccgagatcgtcgag
gctttcggctttcgcaacctgcgtgtcgacggttacgaagccgatgacgtgatcgcgacg
atcgcgcggagggcggctagcgccggtctcgacgtcctggtcgtcaccggcgaccgcgac
ctcttccagatcgtcgacgaccgcatccgcgtgctcgccaccgcgcgtggcatcaccgag
accaagctctacgaccgcgacgcggtggtcgcgcgctacggcatcccgcccgagctggtt
cccgatttcgtggggctcaagggcgacacttccgacaacattccgggcgtcccaggtatc
ggcgagaagacggccgccgagctgttgcaacgtttcggcagcctcgaagaggtgctcgcg
cgcgtcgacgaagtttccggtacgaagcggcgcgagaacttgcgcgctcacgccgaagac
gcgcgtgtctcgaagcagctcgcgacggtcgtcgacaccgttccggtcgagctggaccca
gccgctctcgcccctcccgagccccaccgcgggcgcctgcgcgaggcgttcatgcgcttc
gagctgcgcgagcccctgcggcggctggaggaggcgctcggtccgctgggggaaggcgcg
gccggcgacgctccgcaggacgaggccggcatcgccgtcgccaccgaggcggtgccgctg
cccgagctgcgcgagcgcgcgggcgctatgggcccccttgccgtcgcagtcgctgacgac
ggcagcgacagcgagctcgcggtcgccgcctggaccgggaacggaccggtggcggtggcg
accgccgagagcgccgacgcgctgcttttcgcgctcgacggggcgagcgtcgccgcgcac
gactggaagccgcttctgcgccgggctagcgatccccgcctcggtccccgcctcgtccac
gacacgcgtatcgccgcctggcttctcgactcgctgcgccgccgctacgagctcgaggag
ctagcgcaagcggctgggatcgctgtgcgcgtcgacgaagcgccgaggcccgccacgccc
ggcaaagacaacgaggaggatggcggtggcgatgaagagcgccgcgctcgccggaacgcc
gtcgcccgcgccgcagcgctcacagcgctgctcgccgagcaccagcgcgccgagctcgaa
cgcgccggtctcgctcagcttttcgccgacgtcgagttgccgctcgtcccgatcatcgcc
gcgatggagcgggcgggaatcaagctcgatgtcgccgagctcgaacgggtctcggagggg
ctcgccgagcgcatcgccgaactggagcgcgagatctgggaactcgccggcgaacggttc
accatcggttcgccccagcagctcgcgcgcatccttttcgagaagctcggtctcagccgc
aagcgacgcggcaagacgggcttttcgaccgacgcgcgcgtgctgcagcagatccgccac
gagcatccgatcgtgccgctgatcgagagctggcgcgagctcacgaagctgaagtcgacg
tacatcgacaccctgccgtcctacgtcgggcccgacggtcgcctccacaccaccttcaac
cagacgggcacggcgaccgggcgtttgtcgagcaccaaccccaacctccagaacatcccg
atcaagagcgagctcggcaaaggtatccgcgcggcgttcgtcgccgagccgggttgggtg
ctggtctcggccgactactcgcaggtcgagctgcggctgctcgcccacatcgccggggaa
gagcggctcaaggagttcttccgtgccggtgttgacgtccactcggcgaccgccgccgag
atcctcggcaccgatcccgacaaggccgacgccgccacccgttcgaaagccaagatggtc
aactacggcatcgtctacggcctctcggccttcgggttggccgatcgcctgaacatcccg
cgcgaggaggcgcaggagttcatcgaccgctacttcgagcgcttcccggcgatccgcgcg
ttcatcgaccgcacgatcgagcaggcgcggcgggaagggcaggtgcgcacgctgttcgga
cgtgtgcgccggatccccgagctcgcctcgcgccagtggcagacccagcagctcggcgag
aggctggcggtgaacatggtgatccaggggacggccgccgacgtgatgaaggtggcgatg
gtgcgctgcgatcgggcgctacgcgaagagcgtctgcgagcacggctggtcctgcaaatc
cacgacgagctgctgttcgaggcgcccgcggcggaggcggaggcgctcgccgcgatcgta
cgccgcgagatggtggccgcgctgccgatcgacccgccgctcgctgtcgacgtgggggtg
gggcgcaactggctggaggcgaagtga
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