KEGG   Thermoleophilum album: JDY09_09320
Entry
JDY09_09320       CDS       T08835                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
talu  Thermoleophilum album
Brite
KEGG Orthology (KO) [BR:talu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:talu03400]
    JDY09_09320
Enzymes [BR:talu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     JDY09_09320
    5.6.2.6  RNA 3'-5' helicase
     JDY09_09320
DNA repair and recombination proteins [BR:talu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    JDY09_09320
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr DEAD Helicase_C WH2_Lhr WH3_Lhr ResIII AbiEi_4 PhoH DUF6406 AAA_25
Other DBs
NCBI-ProteinID: WDT93575
LinkDB
Position
1996395..2000858
AA seq 1487 aa
MGSDPLAVLSAPVADWFRQAFERPTRAQELAWPAIAAGEHVLVSAPTGSGKTLAAFLCGI
DRLVRELGSDDRARADADPLAEQRGEGVRIVYVSPLKALSYDVERNLRTPLRGIAARPGG
EAAAAIRVGLRTGDTPQRERRAMLRHPPHILITTPESLYLMLTSQARELFATCECVIVDE
VHALAPSKRGAHLAITLERLEAAAGRALQRIGLSATASPLEEVGRFLVGSGRSCRVLDAG
EKPRLDLEICVPVEDMTDPDSGAELAPTTDGAGIQRSIWPAIYPALLELVERHRSTIVFV
NNRRGAERLAMRLNELASEQAGKPLVVARAHHGSLSREERNNVEELLKAGEIPCIVATSS
LELGIDMGAVDLVVQVESPKSVATGLQRVGRAGHGVGEVSKGRVFPKFRADLLEATVVSQ
RMREGAIEQIRVPRNPLDVLCQQIVAIAASEEEVSVAELHALVRRAWPFAELSRELLCEV
LDMLDGRYPSEQFAELRPRIVWDRVADTIRPRKGARQLATVNAGTIPDRGLYGVHLPDGR
RVGELDEEMAYEARPGQTFLLGATTWRIEEITHDRVIVTPAPGLPGIVPFWRGEGAERPS
ELGRAIGEFVRQAADADPAALARRFHLDERAARNLVAYLREQRAATGTLPSDRAVVVERF
RDEIGDWRLCVLSPWGGRVHAAWALAISARVRDELGIECDAIWSDDGVVLHLPDAEEPPR
GEIALVDPDALEDLVVRELRGSALFGARFRENAARALLLPKTRPGRRTPLWQQRLKAQSL
LEVAGRYPRFPIVLETYRECLRDVLDLPALEKLLRSIASGEVAFVEVETDRASPFASSLL
FDYVATYMYEGDTPNAERRAAALALDRDLLRELLGQEELRELLDADAIAEVEAELQHTHE
RRRAANADELIDVLRAVGDLTASEIALRCVGVVSPRALLAELERKRRIARVRIAGEERII
AADEAGLYRDAFGCAPPAGLPERFLADEPEARLRVVRRFARTRGPFTTEQANARFGVDVT
PELRELERRGELLRGELRPAGSEREWCCPEVLRRLRRASLARLRRELEPVEHATYARFLA
NWQGATGAPTGGGVAALRDQLIALQALPLAVESWERDVFPRRLRAYSPTWLDELLASGEV
VWVGAGRLGRSGRVAFLFREDARLLGPLPGAGPRPEGPVHDALRAALAQGARFWFEIGEE
LSGFAAEELEAALWELVWAGEVTNDSFAPLRAGRGAGSERRAQVRRGTRFARRRRGPAPH
LVGRWSLTAPLFRSAPAFGPRMRALAELLLERYGVVTRETARSESVPGGFAALYGELQKL
EVLGIAQRGYFVEGLGGVQFALPSAVDRLRSQRDDPEEAPLVIAATDPAQPYGSVLPWPQ
REDGRRPQRVAGAYVVLDHGQPTLYVERGGRALVTLAGEPFGDDGAPAPWLVRALQALAQ
AASEGRCGRLALERIDGEPLAGSPLEAMLVELGFRRGPKRLVAGAGT
NT seq 4464 nt   +upstreamnt  +downstreamnt
gtgggctccgatcccctggcagtgctgagcgctcccgtcgccgactggtttcgccaagcg
ttcgagcgcccgacacgcgcccaggagctcgcctggccggcgattgcagcgggagagcac
gtgctggtctcggcaccgaccgggtcgggcaaaacgctggccgcctttctttgcggcatc
gaccggctagtgcgcgaactcggcagtgacgatcgagcgcgcgccgacgccgaccctctc
gctgagcaacgaggcgagggcgtgcgcatcgtttacgtctcgccgctgaaagcgctctcg
tacgacgtcgagcgaaacctgcgcacaccgttgcgcggaatcgcagcgcgaccgggcggc
gaagcggccgcggcgatccgcgtcggcttgcggaccggcgacaccccgcagcgcgagcgg
cgcgcgatgttgcgacacccgccgcacatcctgatcaccacccccgagtcgctgtatctg
atgttgacctcgcaggcgcgcgagctgttcgcgacctgcgagtgcgtgatcgtcgacgag
gtgcacgctctcgccccgagcaagcgcggggcgcacctggcgatcacgctcgaacgtctc
gaggctgcggccggccgagcgctccaacgcatcgggctgtcggcgacggcctcgccactc
gaggaggtcggccgcttcctagttggctcgggacgcagctgccgcgtgctcgacgccgga
gaaaagccgcggctcgatctcgagatctgcgtaccggtcgaggacatgaccgatcccgac
agcggcgccgagctcgcccccaccaccgacggcgccggcatccagcggtcgatctggccg
gcgatctacccggcgctgctcgagctcgtcgagcgccaccgctcgacgatcgtcttcgtg
aacaaccgccgcggcgccgagcggctcgcgatgcgcctcaacgagctcgcctccgaacaa
gcgggcaagccgctcgtggtcgctcgcgcccaccacggctcgctctcccgcgaggaacgc
aacaacgttgaggagcttttgaaggcgggcgagatcccgtgcatcgttgccacctcttcg
ctcgaactcggcatcgacatgggggcggtcgacctcgtggtgcaggtcgagtcgcccaag
tccgtcgccaccggccttcaacgcgttgggcgggccggtcacggcgtgggtgaggtctcg
aaagggcgtgtgttcccgaagttccgcgccgaccttctggaagcaacggtggtgtcccag
cggatgcgcgagggtgcgatcgaacagatccgcgttccccgcaatccgctcgacgtgctc
tgccagcagatcgtcgcgatcgccgccagcgaagaagaggtgtcggtagccgagctgcac
gcgctcgttcgtcgcgcctggccgttcgccgagctctcgcgcgagctgctgtgcgaggtg
ctcgacatgctcgacgggcgctacccctcggaacagttcgccgagctgcgcccgcggatc
gtctgggaccgcgtcgccgacacgatccgccctcgcaaaggggcccggcaactggcgacg
gtcaacgccgggacgattcccgaccgtggcctttacggcgtgcacctacccgacgggcgc
cgtgtcggcgagctcgacgaggagatggcgtacgaagcgcgccccggtcagacctttctg
ctcggtgcgaccacctggcgaatcgaagagatcacccacgatcgggtgatcgtcacgccg
gcgcccggtctgcccgggatagttcccttctggcgcggcgagggcgccgagcgaccgagc
gagctggggcgtgcgatcggcgagttcgtccgccaagcggccgacgccgatccggccgcg
ctcgcgcgccgcttccacctcgacgagcgcgcggcgcgcaacctcgtcgcctacttgcgc
gagcaacgtgctgcgaccggcaccctgccgtccgaccgcgccgtggtcgtcgagcgcttc
cgggacgagatcggcgactggcggttgtgcgtgctctccccctggggcgggcgcgtgcac
gcagcgtgggcgctagcgatctcggcacgggtgcgcgacgagctcggcatcgagtgcgac
gcgatctggtcggacgacggcgtcgtactgcacctgcccgacgccgaagagccgccgcgc
ggtgagatcgcgctcgtcgaccccgacgcccttgaggatctcgtcgtccgcgagctgcgc
ggctcggcgctgttcggcgcccgcttccgcgagaacgccgcccgcgcgctgctcctgccg
aaaacgcgtccgggccggcgaacgccgctgtggcagcagcgactgaaagcgcagtcgctg
ctcgaagtggcgggccgctatccgcgctttccgatcgtgctcgagacctaccgcgagtgc
ttgcgcgacgtgctcgacctaccggcactggagaaactgttgcgctcgatcgcaagcggc
gaggtggcgttcgtcgaggtcgaaaccgatcgcgcttcgccgttcgcgtcgtcgctgctt
ttcgactacgtcgcgacgtacatgtacgagggcgacacgcccaacgccgaacggcgtgcc
gcagccctcgctctcgaccgcgatctcttgcgcgagctgctcggacaggaggagctgcgc
gagcttctcgacgccgacgctatcgccgaggtcgaagccgagctccagcacacgcacgag
cgccggcgcgcggccaacgccgacgagctgatcgacgtgctgcgcgccgtcggcgacctg
accgcgagcgagatcgcgctgcgctgcgtgggggtcgtatcgccccgcgcgctccttgcc
gagctcgagcgcaaacggcgcatcgctcgcgtgcgtatcgccggcgaagagcggatcatc
gccgccgacgaggcagggctctaccgcgacgccttcggctgcgcgccgccagccgggctt
cccgagcgcttcctcgctgacgagcccgaagctcggctgcgggtcgtacggcgcttcgca
cgcacacgcggtccgttcacgaccgagcaggccaacgcccgcttcggggtcgacgtcaca
ccggagttgcgcgagctcgagcgccgcggcgagctcttgcgcggcgagctacgccctgcc
ggcagcgagcgcgagtggtgctgccccgaggtgctgcgccgcttgcgccgggcgtcgctg
gcgcggctgcgacgcgagctcgagccggtcgagcacgcgacctacgcgcgcttcttggcg
aactggcagggcgcgacaggcgcacccacaggcggcggtgtggcagcgctgcgcgaccaa
ctgatcgcactccaggcgctgccactcgccgtcgagagctgggagcgcgatgtttttccg
cgccgcctccgcgcctactcgccgacctggctcgacgagcttctggcgagcggcgaggtg
gtgtgggtcggcgccgggcggctcggtcgcagcggcagggtggcgttcctctttcgcgag
gacgcgcgcctgctcgggccgctgcccggtgcgggaccgcggcccgagggaccggtgcac
gacgccctgcgcgcagcgctcgcgcagggagcgcggttctggttcgagatcggggaggaa
ctgtcgggcttcgcggccgaggagctcgaagccgcgctgtgggaactcgtctgggcgggc
gaggtcacgaacgactcgttcgcgccgctgcgcgctggccgtggtgccggcagcgaacgg
cgcgcccaggtgcggcgcggtacgcgcttcgcacgtcgccggcgtggtcccgcgccccac
ctcgtcggccgctggtcgctgaccgcgccgcttttccgcagcgcgccggcgttcgggccc
aggatgcgcgcactcgccgagctgttgctcgagcgctacggcgtcgtaacgcgcgaaact
gcacgcagcgagagcgtgcccggcggtttcgccgccctctacggcgaactacagaagctc
gaagtgctcggcatcgcccagcgcggctacttcgtcgaagggctcggcggcgtgcagttc
gcactgccgagcgcagtcgaccggctgcgctcacagcgcgacgaccccgaagaggcgccg
ctcgtcatcgccgctaccgatcccgcccagccctacgggtcggtgctgccttggccgcag
cgcgaggacggtcgccgcccgcaacgcgtggcgggcgcgtacgtcgtgctcgaccacgga
cagccgactctctacgtcgaacggggcgggcgcgcccttgtgacgctggctggcgaaccc
ttcggcgacgacggcgctccagccccctggctcgtgcgcgcgctgcaagcgctcgcacaa
gctgcgagcgaggggcggtgcgggcggctggcgctcgaacgcatcgacggtgagcccctg
gcgggctcgccgctcgaggcgatgcttgtcgagctcggcttccgccggggaccgaagcgg
ctcgtggcgggcgccggaacctga

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